BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0295.p
         (687 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309512|ref|YP_003773604.1| TonB-dependent heme/hemoglobin ...  1321   0.0  
gi|300309449|ref|YP_003773541.1| TonB-dependent hemoglobin/trans...    66   7e-12

>gi|300309512|ref|YP_003773604.1| TonB-dependent heme/hemoglobin
           receptor protein [Herbaspirillum seropedicae SmR1]
          Length = 690

 Score = 1321 bits (3419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/690 (98%), Positives = 680/690 (98%), Gaps = 3/690 (0%)

Query: 1   MAIQRQLIATAVLSALATWSLAASAQTAAPAAPIDPAVSVTPAAPAAAQPALQP---IVV 57
           MAIQRQLIATAVLSALATWSLAASAQTAAPAAPIDPAVSVTPAAPAA   A      IVV
Sbjct: 1   MAIQRQLIATAVLSALATWSLAASAQTAAPAAPIDPAVSVTPAAPAAPAAAQPALQPIVV 60

Query: 58  TATPFGSQEDVQVLTPAKVIAGDELRNKLGNSLGETLSSELGVSASAFGAGASRPIIRGM 117
           TATPFGSQEDVQVLTPAKVIAGDELRNKLGNSLGETLSSELGVSASAFGAGASRPIIRGM
Sbjct: 61  TATPFGSQEDVQVLTPAKVIAGDELRNKLGNSLGETLSSELGVSASAFGAGASRPIIRGM 120

Query: 118 EGPRVMILQNGMGVSDVSTVSNDHAVATEAATARQIEILRGPAALLYGSGAIGGLVNVVN 177
           EGPRVMILQNGMGVSDVSTVSNDHAVATEAATARQIEILRGPAALLYGSGAIGGLVNVVN
Sbjct: 121 EGPRVMILQNGMGVSDVSTVSNDHAVATEAATARQIEILRGPAALLYGSGAIGGLVNVVN 180

Query: 178 DRIPTELVGKPTGTVEGRYGTVDGEKNTSFSLDTSAGQIGLHLDGNYRDTSDYKIPGNAR 237
           DRIPTELVGKPTGTVEGRYGTVDGEKNTSFSLDTSAGQIGLHLDGNYRDTSDYKIPGNAR
Sbjct: 181 DRIPTELVGKPTGTVEGRYGTVDGEKNTSFSLDTSAGQIGLHLDGNYRDTSDYKIPGNAR 240

Query: 238 QGDGSTASGRLPNSFTHESSVGLGASYVSNWGYVGVSAATLDDHYGIPTSELSFIDLHQN 297
           QGDGSTASGRLPNSFTHESSVGLGASYVSNWGYVGVSAATLDDHYGIPTSELSFIDLHQN
Sbjct: 241 QGDGSTASGRLPNSFTHESSVGLGASYVSNWGYVGVSAATLDDHYGIPTSELSFIDLHQN 300

Query: 298 RYDIDTVVNQPFAGIEKLRVRLGYTDYTHIEKQRDGTPDTVFSNRAVQTRWELTHAPLAG 357
           RYDIDTVVNQPFAGIEKLR+RLGYTDYTHIEKQRDGTPDTVFSNRAVQTRWELTHAPLAG
Sbjct: 301 RYDIDTVVNQPFAGIEKLRMRLGYTDYTHIEKQRDGTPDTVFSNRAVQTRWELTHAPLAG 360

Query: 358 WHGTFGVQTEQSNYSALSAATGAAELTPPTRSTSFAGFLVEERQFGQVLASAGLRGESVS 417
           WHGTFGVQTEQSNYSALSAATGAAELTPPTRSTSFAGFLVEERQFGQVLASAGLRGESVS
Sbjct: 361 WHGTFGVQTEQSNYSALSAATGAAELTPPTRSTSFAGFLVEERQFGQVLASAGLRGESVS 420

Query: 418 RRPDAGRQGRDFNLLSWSTGALWTFQPGYGLGLTYSLAQRAPTVEELYSNGPHESTSTFD 477
           RRPDAGRQGRDFNLLSWSTGALWTFQPGYGLGLTYSLAQRAPTVEELYSNGPHESTSTFD
Sbjct: 421 RRPDAGRQGRDFNLLSWSTGALWTFQPGYGLGLTYSLAQRAPTVEELYSNGPHESTSTFD 480

Query: 478 IGSSQLKKETSHNIELSLQKTEGLVRWKGNLFRNKVNNYIYGRTNGQVDDSGAADPNGEF 537
           IGSSQLKKETSHNIELSLQKTEGLVRWKGNLFRNKVNNYIYGRTNGQVDDSGAADPNGEF
Sbjct: 481 IGSSQLKKETSHNIELSLQKTEGLVRWKGNLFRNKVNNYIYGRTNGQVDDSGAADPNGEF 540

Query: 538 TQRFWSQADATIRGAEAEVSYNWNGEGMSGRLFADTSRGTLDNLGNIPLQPATRYGVELG 597
           TQRFWSQADA IRGAEAEVSYNWNGEGMSGRLFADTSRGTLDNLGNIPLQPATRYGVELG
Sbjct: 541 TQRFWSQADAAIRGAEAEVSYNWNGEGMSGRLFADTSRGTLDNLGNIPLQPATRYGVELG 600

Query: 598 YKTGPWASGMKVLRAQRQDRLASFETYATPSYTQVDANLSYTQKLNGVKLTWFALARNLL 657
           YKTGPWASGMKVLRAQRQDRLASFETYATPSYTQVDANLSYTQKLNGVKLTWFALARNLL
Sbjct: 601 YKTGPWASGMKVLRAQRQDRLASFETYATPSYTQVDANLSYTQKLNGVKLTWFALARNLL 660

Query: 658 NQDIRLSTSVLRETVPMGGRNFIVGARTSF 687
           NQDIRLSTSVLRETVPMGGRNFIVGARTSF
Sbjct: 661 NQDIRLSTSVLRETVPMGGRNFIVGARTSF 690


>gi|300309449|ref|YP_003773541.1| TonB-dependent
           hemoglobin/transferrin/lactoferrin receptor protein
           [Herbaspirillum seropedicae SmR1]
          Length = 765

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 20/197 (10%)

Query: 8   IATAVLSALATW-SLAASAQTAAPAAPIDPAVSVTPAAPAAAQPALQPIVVTATPFGSQE 66
            A AV  AL  W  + A AQ   P +    +   +     A+   LQ +VVTA   GS +
Sbjct: 11  CAAAVFLALQQWLCVGAYAQADQPQSVQSSSSDPSVVLAQASGKKLQEVVVTANRSGSSD 70

Query: 67  DVQVLTPAKVIAGDELRNKLGNSLGETLSSELGVSA--------------SAFGAGASRP 112
                    VI+ +E+       + + L  E GV                +  G G +  
Sbjct: 71  SDHAAATVSVISAEEIEQHNARDIKDALRYEPGVEVKRSVYRMSGITGPGATTGRGGNEG 130

Query: 113 I-IRGMEGPRVMILQNGMGVS---DVSTVSNDHAVATEAATARQIEILRGPAALLYGSGA 168
           I IRG++G RV++L++G+ +       T S      T+    R+IE+LRGPA+ LYGS  
Sbjct: 131 ISIRGLDGNRVLMLEDGISMPRSFSYGTSSVGRGATTDTELYRRIEVLRGPASSLYGSDG 190

Query: 169 IGGLVNVVNDRIPTELV 185
           + G VN +  + P +L+
Sbjct: 191 LTGAVNFIT-KDPADLL 206


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.314    0.130    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,070,284
Number of extensions: 91367
Number of successful extensions: 220
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 224
Number of HSP's successfully gapped: 2
Length of query: 687
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 595
Effective length of database: 1,184,250
Effective search space: 704628750
Effective search space used: 704628750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 134 (56.2 bits)