BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0009.p (399 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311658|ref|YP_003775750.1| non-ribosomal peptide synthetas... 676 0.0 gi|300312041|ref|YP_003776133.1| acyl-CoA synthetase/AMP-acid li... 72 7e-14 gi|300309365|ref|YP_003773457.1| acetyl-coenzyme A synthetase [H... 65 7e-12 gi|300313157|ref|YP_003777249.1| long-chain-fatty-acid-CoA ligas... 59 6e-10 gi|300310257|ref|YP_003774349.1| acetyl-coenzyme A synthetase [H... 59 7e-10 >gi|300311658|ref|YP_003775750.1| non-ribosomal peptide synthetase [Herbaspirillum seropedicae SmR1] Length = 9160 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/399 (97%), Positives = 393/399 (98%) Query: 1 VASAEDMRDGERFANFLRQHGIDALKIVPSHLDALLETPAPYLPATLVLGGEATAPAQLA 60 VASAEDMRDGERFA FLRQHGIDALKIVPSHLDALLETPAPYLPATLVLGGEATAPAQLA Sbjct: 4775 VASAEDMRDGERFAKFLRQHGIDALKIVPSHLDALLETPAPYLPATLVLGGEATAPAQLA 4834 Query: 61 RIRALAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLD 120 RIRALAPQCR+FNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLD Sbjct: 4835 RIRALAPQCRVFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLD 4894 Query: 121 AQLRPTPAGAIGQLWLGGAQLARGYLDAQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGG 180 AQLRPTPAGAIGQLWLGGAQLARGYLDAQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGG Sbjct: 4895 AQLRPTPAGAIGQLWLGGAQLARGYLDAQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGG 4954 Query: 181 VRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACLAADHGQALPA 240 VRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACLAADHGQALPA Sbjct: 4955 VRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACLAADHGQALPA 5014 Query: 241 WRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGRPDSGTPAVVAQAQGALA 300 WRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGR DSGTP VVAQAQGALA Sbjct: 5015 WRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGRQDSGTPDVVAQAQGALA 5074 Query: 301 ALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALEAAPALVFDHPNAIA 360 ALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALEAAPALVFDHPNAIA Sbjct: 5075 ALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALEAAPALVFDHPNAIA 5134 Query: 361 LAAALQAAAPDPDALERLAQSRLESAAPAQDAAMTAMSA 399 LAAALQAAAPDPDALERLAQSRLESAAPAQ +M A++A Sbjct: 5135 LAAALQAAAPDPDALERLAQSRLESAAPAQADSMNALTA 5173 Score = 211 bits (538), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 160/368 (43%), Positives = 199/368 (54%), Gaps = 31/368 (8%) Query: 9 DGERFANFLRQHGIDALKIVPSHLDALLET--PAPYLP-ATLVLGGEATAPAQLARIRAL 65 D + FA +L +H +D LKIVPSHL ALL P LP TLVLGGEAT L RI AL Sbjct: 1365 DPDGFAAYLHEHAVDVLKIVPSHLQALLHAARPEQVLPRHTLVLGGEATGWPLLERIAAL 1424 Query: 66 APQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLDAQLRP 125 P CR+ NHYGP+E TVGVLV EA + + A LP+ AL VLD QLR Sbjct: 1425 QPACRVLNHYGPSETTVGVLVQ------EAASASRRAAVLPVGSALVGVQAWVLDRQLRR 1478 Query: 126 TPAGAIGQLWLGGAQLARGYLD-AQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGGVRLA 184 P GA+G+L+LGGA LARGY A E F+ P+ G+RLYRSGD A L G + Sbjct: 1479 APVGAVGELYLGGAGLARGYHGRAALTAERFVAHPFASGQRLYRSGDRARYLGDGSIEFL 1538 Query: 185 GRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACLAADHGQALPA---- 240 GR D QVK+RG R+EPGE+ L GV A VLA P A L HG + A Sbjct: 1539 GRIDDQVKIRGHRVEPGEVRQQLLRLAGVVDAAVLALPAADDAQRLQL-HGFIVCAAGAV 1597 Query: 241 -----WRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGRPDSGTPAVVAQA 295 WRA LA LP + P+ V P LP NGK+DR+AL + + V Q Sbjct: 1598 ADPAGWRATLAADLPDYLLPTLTPV-PALPLTANGKLDRQALAGLMAGAMAAPQQQVPQV 1656 Query: 296 ---------QGALAALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALE 346 QG L LA A++L+ P + ++FFELG S+L +K++AR R+ L Sbjct: 1657 QQAHQAGAPQGELEHKLAAIWAEVLKLPQVGREDNFFELGGDSILTLKIVARARKE-GLR 1715 Query: 347 AAPALVFD 354 AP + + Sbjct: 1716 IAPKAMME 1723 Score = 173 bits (438), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 169/312 (54%), Gaps = 27/312 (8%) Query: 48 VLGGEATAPAQLARIR-ALAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLP 106 V GGEA A R+R LAP+ + N YGPTE V L+ + + A + + G +P Sbjct: 8531 VFGGEAMPRASFERVRRHLAPRL-LINGYGPTETVVTPLIWKGTSAAGVDFD---GPFVP 8586 Query: 107 LTEALPHAYVRVLDAQLRPTPAGAIGQLWLGGAQLARGYLDA-QQDREAFIDDPW-LPGR 164 + + + +LDA L+P G G+L++GG LARGYL+ Q E F+ DP+ PG Sbjct: 8587 IGKPVGRRNAYILDACLQPVAPGEAGELYIGGDGLARGYLERPAQSAERFVADPFGEPGA 8646 Query: 165 RLYRSGDLAVLLPQGGVRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDG 224 R+YR+GDLA LP G V GR DHQVK+RGFRIE GEIEA LR QPGV +A V+ DG Sbjct: 8647 RMYRTGDLARWLPDGNVEYLGRLDHQVKIRGFRIELGEIEALLRRQPGVAEAAVVVRSDG 8706 Query: 225 -------ALAACLAADHGQALP---------AWRAALAEVLPAQMQPSRWLVLPELPRLG 268 L A + A A P + RAAL LP M P+ +++L LP Sbjct: 8707 QGEETVRQLVAYVGAPQAVAAPETAQRDFSDSLRAALRAGLPEYMLPAHFVLLAALPVTH 8766 Query: 269 NGKVDRKALLEQLGRPDSGTPAVVAQAQGALAALLAQQMAQLLERPAIAANEDFFELGAH 328 NGK+DRKAL P A A ALA + +L+R + ++FFELG Sbjct: 8767 NGKLDRKALPAPQAAPARSYVAPATPAAQALAEI----WQTVLKRERVGQEDNFFELGGD 8822 Query: 329 SLLVIKLIARIR 340 SLL +++IAR R Sbjct: 8823 SLLCLQVIARAR 8834 Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 152/409 (37%), Positives = 198/409 (48%), Gaps = 27/409 (6%) Query: 1 VASAEDMRDGERFANFLRQHGIDALKIVPSHLDALLETPAPYLPATL---VLGGEATAPA 57 +A+ ++ RD A +R+H +D L VPS L + P +L + GEA PA Sbjct: 7413 LAAPDEHRDPALLAARIRRHAVDTLHFVPSMLQGFVAHPDSAQCHSLRQVICSGEAL-PA 7471 Query: 58 QL-ARIRALAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYV 116 +L + A PQ + N YGPTE + V H E S+P+ + H Sbjct: 7472 ELQEQAFARLPQIALHNLYGPTEAAIDV-THWTCRPGER--------SVPIGRPISHTAA 7522 Query: 117 RVLDAQLRPTPAGAIGQLWLGGAQLARGYLDAQQ-DREAFIDDPWL-PGRRLYRSGDLAV 174 VLD L P P G G+L+LGG LARGYL E F+ DP+ G R+YR+GDL Sbjct: 7523 YVLDGGLNPLPHGIAGELYLGGIGLARGYLGRPGLSAERFVADPFAADGSRMYRTGDLVR 7582 Query: 175 LLPQGGVRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACL---A 231 G + GR DHQVK+RG RIE GEIEA L QPGV A+V+A + A L A Sbjct: 7583 RRADGEIEYLGRTDHQVKIRGLRIELGEIEAQLLAQPGVAAAVVVALVEPGRPARLVGYA 7642 Query: 232 ADHGQAL--PAWRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGRPDSGTP 289 AD G L A RAAL + LP M P R ++LP LP NGKVDRKA L RPD Sbjct: 7643 ADPGGMLEAEALRAALLQSLPDYMVPQRLILLPALPLNANGKVDRKA----LPRPDFNEQ 7698 Query: 290 AVVAQAQGALAALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQSLALEAAP 349 QG LA A++L + +++FFELG S+L ++++AR + P Sbjct: 7699 GGYEAPQGQTEIGLAAIWAEVLRLQRVGRHDNFFELGGDSILSLQIVARAHEQ-GWPLTP 7757 Query: 350 ALVFDHPNAIALAAAL-QAAAPDPDALERLAQSRLESAAPAQDAAMTAM 397 +F LA Q P P A+ RLE A A A+ Sbjct: 7758 RQLFQSQTVAELAQQCDQLQPPAPTQAVTAARGRLEDYLSAAQTAQLAL 7806 Score = 164 bits (416), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 139/357 (38%), Positives = 181/357 (50%), Gaps = 32/357 (8%) Query: 8 RDGERFANFLRQHGIDALKIVPSHLDALLETPA-PYLPA------TLVLGGEATAPAQLA 60 R E F L + + L PS LL+ PA LP+ T++ GGEA P L Sbjct: 5882 RSPEDFLALLVEQRVTVLNQTPSAFRQLLQLPALRQLPSEALALRTVIFGGEALEPEMLR 5941 Query: 61 -RIRALAPQC-RIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRV 118 I Q + N YG TE TV V R A+ D S P+ A+P + V Sbjct: 5942 PWITQFGDQRPALINMYGITETTVHVTYRRLL-----RADLDASRS-PIGAAIPDLGLYV 5995 Query: 119 LDAQLRPTPAGAIGQLWLGGAQLARGYLD-AQQDREAFIDDPWL----PGRRLYRSGDLA 173 LD QL PAG G+L++ GA LARGYL+ A E F+ +P+ G RLYR+GDL Sbjct: 5996 LDQQLNLAPAGVPGELYVSGAGLARGYLNRAALSAERFVANPFARAGEEGSRLYRTGDLV 6055 Query: 174 VLLPQGGVRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGA---LAACL 230 G + GR D QVK+RGFRIE GEIEA L QPGV A V+ D A L L Sbjct: 6056 RWRHDGQMDYLGRIDQQVKIRGFRIELGEIEAQLLAQPGVGAATVMVRQDAATPRLVGYL 6115 Query: 231 AADHGQA-----LPAWRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKALLEQLGRPD 285 + G A A R AL VLP M P+ ++LP LP NGKVDRKAL P+ Sbjct: 6116 SPQAGIAPEALDTGALRTALGAVLPDYMVPAALVMLPALPLNINGKVDRKALPA----PE 6171 Query: 286 SGTPAVVAQAQGALAALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQS 342 A QGAL LA ++L+ A+ +++FFELG S+L +++++R R++ Sbjct: 6172 LAARTAYAAPQGALEEQLAAIWREVLKGGAVGRDDNFFELGGDSILSLQIVSRARRA 6228 Score = 159 bits (403), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 147/398 (36%), Positives = 190/398 (47%), Gaps = 29/398 (7%) Query: 8 RDGERFANFLRQHGIDALKIVPSHLDALLETPAPYLPATL---VLGGEATAPAQLARIRA 64 RD A +R+HG+ L VPS L A L + +L + GEA + A Sbjct: 2871 RDPAELAALIREHGVSTLHFVPSMLQAFLASGQAAACTSLRQVICSGEALPAEARDQFFA 2930 Query: 65 LAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLDAQLR 124 L PQ + N YGPTE + V H + +P+ + + VLDA L Sbjct: 2931 LLPQAALHNLYGPTEAAIDV-THWTCQHGDR-------GPVPIGQPISGLRAVVLDADLN 2982 Query: 125 PTPAGAIGQLWLGGAQLARGYLDAQQ-DREAFIDDPWLPGRRLYRSGDLAVLLPQGGVRL 183 P G G+L+LGG LARGYL E F+ P+ G RLYR+GDL G + Sbjct: 2983 VLPCGVAGELYLGGIGLARGYLGRPGLTAERFVASPFGQGERLYRTGDLVRWREDGQIDY 3042 Query: 184 AGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGA---LAACLAADHGQALPA 240 GR DHQVK+RG RIE GEIEA L V +A+V+A GA LA +A+ Q A Sbjct: 3043 LGRLDHQVKIRGLRIELGEIEAQLLALDEVEEAVVVAHEHGAGPVLAGYVASRRWQRQDA 3102 Query: 241 --WRAALAEVLPAQMQPSRWLVLPELPRLGNGKVDRKAL-LEQLGRPDSGTPAVVAQAQG 297 + ALA LP M P+ +LP LP NGK+DRKAL +L D A QG Sbjct: 3103 ATLKQALAARLPDYMVPAVLTLLPTLPLNANGKIDRKALPAPRLHSEDF----AYAAPQG 3158 Query: 298 ALAALLAQQMAQLLERPAIAANEDFFELGAHSLLVIKLIARIRQ----SLALEAAPALVF 353 + LAQ LL + + FFELG HSLL L+AR+R + + LVF Sbjct: 3159 QVEQRLAQIWQALLGLERVGRFDHFFELGGHSLLAASLVARLRYQGEAGVGVALPLRLVF 3218 Query: 354 DHPNAIALAAALQAAAPDPDALERLAQSR---LESAAP 388 +P +AA ++A P P + RL R L S AP Sbjct: 3219 AYPRLHEMAACIEARPPLPPSSWRLHLRRCCNLASGAP 3256 >gi|300312041|ref|YP_003776133.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum seropedicae SmR1] Length = 539 Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 34/280 (12%) Query: 21 GIDALKIVPSHLDALLETPAPYLPA--TLVLGGEATAPAQLARIRALAPQCRIFNHYGPT 78 GI L VP L P P + L G A + LA++R PQ ++F YG T Sbjct: 264 GITGLAGVPPLWQQLAGLPWPQGCSLRYLTNSGGALPRSVLAQLRRALPQAQVFLMYGLT 323 Query: 79 ECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLDAQLRPTPAGAIGQLWLGG 138 E R+ AE + P + + A+P+A + V+ P G +G+L G Sbjct: 324 EA------FRSTYLPPAELDRRPDS---IGRAIPNAEIMVVRPDGSPCAPGEVGELVHRG 374 Query: 139 AQLARGYLD-----AQQ-----DREAFIDDPWLPGRRLYRSGDLAVLLPQGGVRLAGRAD 188 A +A+GY + A++ REA + P L SGD + QG + GRAD Sbjct: 375 ALVAQGYWNDPARTAERFRPAPGREAALGTPELA----VWSGDSVRMDEQGYLYFVGRAD 430 Query: 189 HQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPD----GALAACLAADHGQALPAWRAA 244 +KV G+RI P E+E L Q V+ A+ A + + +L A + A Sbjct: 431 DMIKVSGYRISPHEVEEVLHATGLADQFAVVGVAHPQQGQAVVAVVPSSCTASLEAVQQA 490 Query: 245 LAEVLPAQMQPS---RWLVLPELPRLGNGKVDRKALLEQL 281 LP+ M P+ RW ELPR NGK+DRK + + L Sbjct: 491 CRAHLPSYMLPAALHRW--PGELPRSPNGKLDRKLMQQTL 528 >gi|300309365|ref|YP_003773457.1| acetyl-coenzyme A synthetase [Herbaspirillum seropedicae SmR1] Length = 549 Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 28/221 (12%) Query: 71 IFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLDAQLRPTPAGA 130 I YG TEC + V + + P S + A+P V+++D Q + P G Sbjct: 342 INEFYGQTECNLVV---------SSSSHCYPSVSGSMGRAVPGHVVQIVDEQGQVLPHGT 392 Query: 131 IGQLWLGG---AQLARGYLDAQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGGVRLAGRA 187 +G + + R + + + RE F D L +GDL + QG +R GR Sbjct: 393 VGNIAIRAPDPVMFLRYWRNEEATREKFAGDFLL-------TGDLGSMDEQGYIRYLGRN 445 Query: 188 DHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDGALAACLAA-----DHGQALPAWR 242 D + G+RI P IE L P VR A V+ D + A D A + Sbjct: 446 DDVITSAGYRIGPAAIEECLMRHPAVRIAAVVGVKDALRTEVVKAFVVLKDGVTPDEALK 505 Query: 243 AALAEVLPAQM----QPSRWLVLPELPRLGNGKVDRKALLE 279 A L + + AQ+ P + LP GK+ RK L E Sbjct: 506 AELQQHVRAQLAAHEYPRLISFVAALPTTATGKIMRKTLKE 546 >gi|300313157|ref|YP_003777249.1| long-chain-fatty-acid-CoA ligase [Herbaspirillum seropedicae SmR1] Length = 566 Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 108/284 (38%), Gaps = 27/284 (9%) Query: 8 RDGERFANFLRQHGIDALKIVPSHLDALLETP----APYLPATLVLGGEATAPAQLARIR 63 RD F L ++ ++ V + +ALL + +GG +A Sbjct: 289 RDIPGFVKELAKYKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKW 348 Query: 64 ALAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYVRVLDAQL 123 C I YG +E + + A E G LP TE +LD Sbjct: 349 KKLTGCPIIEGYGLSETSP---IASANPCTIDEYTGTIGLPLPSTE------FAILDDDG 399 Query: 124 RPTPAGAIGQLWLGGAQLARGYLDAQQDREAFIDDPWLPGRRLYRSGDLAVLLPQGGVRL 183 +P P G G++ + G Q+ GY + D A + P +++GD+ V+ +G ++ Sbjct: 400 QPVPLGQPGEIAIRGPQVMPGYWQ-RPDETAKVMTP----DGFFKTGDIGVMDERGYTKI 454 Query: 184 AGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPD---GALAACLAADHGQALPA 240 R + V GF + P E+E + PGV + + PD G + L A Sbjct: 455 VDRKKDMILVSGFNVYPNEVEGVVAQHPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSA 514 Query: 241 WRAALAEVLPAQM----QPSRWLVLPELPRLGNGKVDRKALLEQ 280 A L + Q +P ELP+ GK+ R+ L ++ Sbjct: 515 --AQLMDYCKEQFTGYKKPKYIEFRDELPKTNVGKILRRELRDE 556 >gi|300310257|ref|YP_003774349.1| acetyl-coenzyme A synthetase [Herbaspirillum seropedicae SmR1] Length = 556 Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 96/232 (41%), Gaps = 26/232 (11%) Query: 57 AQLARIRALAPQCRIFNHYGPTECTVGVLVHRAATEAEAEAEADPGASLPLTEALPHAYV 116 A++ R A A I +HYG TE + V H A E PG++ A+P V Sbjct: 328 AEVVRWFASALDVPIHDHYGQTELGMVVNNHHALRH-----EVVPGSA---GFAMPGYRV 379 Query: 117 RVLDAQLRPTPAGAIGQLWLGGAQLARGYLDA--QQDREAFIDDPWLPGRRLYRSGDLAV 174 VLD + A G+L + A+ + +QD A Y +GD Sbjct: 380 VVLDENHQELGANQPGELAIDIARSPLYWFSGYWKQDTPAI-------AHGYYSTGDNVE 432 Query: 175 LLPQGGVRLAGRADHQVKVRGFRIEPGEIEAALRTQPGVRQALVLAAPDG-----ALAAC 229 L P G + GR+D + G+RI P ++E+AL P V V+ PD A Sbjct: 433 LEPNGSISFIGRSDDVITSAGYRIGPFDVESALLEHPAVADVAVIGLPDPERTEIVKAFV 492 Query: 230 LAADHGQALPAWRAALAE----VLPAQMQPSRWLVLPELPRLGNGKVDRKAL 277 + +D +A A R LA+ L A P L LP+ +GK+ R L Sbjct: 493 VLSDQFKASDALREQLAQHVKRRLSAHAYPRAIEFLDALPKTPSGKLQRFVL 544 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.319 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,124,541 Number of extensions: 46244 Number of successful extensions: 272 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 243 Number of HSP's successfully gapped: 11 Length of query: 399 Length of database: 1,619,870 Length adjustment: 87 Effective length of query: 312 Effective length of database: 1,207,925 Effective search space: 376872600 Effective search space used: 376872600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)