BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0005.p (705 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 1436 0.0 gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore rece... 895 0.0 gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor prote... 396 e-111 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 256 3e-69 gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho... 256 5e-69 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 1436 bits (3717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 698/705 (99%), Positives = 700/705 (99%) Query: 1 MPANRPTLTFLAVQCALLTLAAPAWAQQQALPQVEIKADAETANGPVNGYVAKRTASATK 60 MPANRPTLTFLAVQCALLTLAAPAWAQQQALPQVEIKADAETANGPVNGYVAKRTASATK Sbjct: 1 MPANRPTLTFLAVQCALLTLAAPAWAQQQALPQVEIKADAETANGPVNGYVAKRTASATK 60 Query: 61 TDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGANTETHGVDPRGYEYFNLRGFIN 120 TDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGAN+ETHGVDPRGYEYFNLRGFIN Sbjct: 61 TDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGANSETHGVDPRGYEYFNLRGFIN 120 Query: 121 AQVTSNFLNGLRQIPGGFGQFRTETYGMERIEVLRGPGSVTFGQADPGGVINRVSKLPGM 180 AQVTSNFLNGLRQIPGGFGQFRTETYGMERIEVLRGPGSVTFGQADPGGVINRVSKLPGM Sbjct: 121 AQVTSNFLNGLRQIPGGFGQFRTETYGMERIEVLRGPGSVTFGQADPGGVINRVSKLPGM 180 Query: 181 DIPNELGVDIGSFNRKQVVADLNGHTQDGEYLWRVVGLGLDSNNQYKFSNGQSGDNNRFY 240 DIPNELGVDIGSFNRKQVVADLNGHTQDGEYLWRVVGLGLDSNNQYKF+NGQSGDNNRFY Sbjct: 181 DIPNELGVDIGSFNRKQVVADLNGHTQDGEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFY 240 Query: 241 LAPSLTWRPSASTSLTLMADYMNDRSGSSRWTAVRPGNVLTHTLIGDPNFDRQSNDQWSF 300 LAPSLTWRPSASTSLTLMADYMNDRSGSSRWTAVRPGNVLTHTLIGDPNFDRQSNDQWSF Sbjct: 241 LAPSLTWRPSASTSLTLMADYMNDRSGSSRWTAVRPGNVLTHTLIGDPNFDRQSNDQWSF 300 Query: 301 GYQFEHKFDNAWTFRQNFRQANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQL 360 GYQFEHKFDNAWTFRQNFRQANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQL Sbjct: 301 GYQFEHKFDNAWTFRQNFRQANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQL 360 Query: 361 EGRLKWGATEHTVLFGLDWSRMYDREVRYRGAAPSLNIDNPVYGVAIPAATTLFGNLEEN 420 EGRLKWGATEHTVLFGLDWSRMYDREVRYRGAAPSLNIDNPVYGV IPAATTLFGNLEEN Sbjct: 361 EGRLKWGATEHTVLFGLDWSRMYDREVRYRGAAPSLNIDNPVYGVTIPAATTLFGNLEEN 420 Query: 421 MNQTGLYAQDQIKFDPRLTLTLGGRWDKVKDETRNYLTRATTRSDDSALSGRIGLSYLVT 480 MNQTGLYAQDQIKFD RLTLTLGGRWDKVKDETRNY R TTRSDDSALSGRIGLSYLVT Sbjct: 421 MNQTGLYAQDQIKFDQRLTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVT 480 Query: 481 RDIAPYVSYATSFLPQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTN 540 RDIAPYVSYATSFLPQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTN Sbjct: 481 RDIAPYVSYATSFLPQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTN 540 Query: 541 VQTPDPAHTNFNVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQ 600 VQTPDPAHTNFNVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQ Sbjct: 541 VQTPDPAHTNFNVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQ 600 Query: 601 PILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYN 660 PILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYN Sbjct: 601 PILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYN 660 Query: 661 LNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW 705 LNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW Sbjct: 661 LNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW 705 >gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 832 Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/673 (62%), Positives = 521/673 (77%), Gaps = 2/673 (0%) Query: 34 VEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLR 93 V + D A PV GYVA R+A+ATKTDTP+LE+ QSVSVVTR EM+ARG S+LDVLR Sbjct: 161 VSGRRDEPGAADPVEGYVALRSATATKTDTPLLELAQSVSVVTRAEMEARGANSILDVLR 220 Query: 94 YMPGANTETHGVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFGQFRTETYGMERIEV 153 YMPGANTETHGVDPRGY+YFNLRGFINAQ TSN+LNGLRQIP GFG FRTETYG+ER+EV Sbjct: 221 YMPGANTETHGVDPRGYDYFNLRGFINAQTTSNYLNGLRQIPSGFGMFRTETYGLERVEV 280 Query: 154 LRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQ-DGEYL 212 LRG S +FGQADPGGV+NRVSKL G NEL VD+GSF R+QV ADL+G +G Sbjct: 281 LRGANSASFGQADPGGVVNRVSKLAGSGARNELMVDVGSFQRRQVAADLSGDLDPEGRVQ 340 Query: 213 WRVVGLGLDSNNQYKFSNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSGSSRWT 272 R+VGL LD + Q++++NG++GDN+R YLAPSL RPSA TSL L+A+Y+ DRSGS RWT Sbjct: 341 ARLVGLLLDGDTQFRYANGRAGDNDRLYLAPSLKIRPSADTSLILLAEYLKDRSGSGRWT 400 Query: 273 AVRPGNVLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQNFRQANLKSVYAALNP 332 AVR THTL+GDP+FD+Q +QWS G+ EH+ D WT RQ+FRQA L+S YAA+NP Sbjct: 401 AVRADGSQTHTLLGDPDFDQQRGEQWSLGWMLEHRLDATWTLRQHFRQAALRSQYAAVNP 460 Query: 333 GTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFGLDWSRMYDREVRYRGA 392 G+ GS+L+R T VY++QV+NTL+DNQ R++WG EH VL GLDWS M RE RYRG Sbjct: 461 GSFNGSILSRSTAVYDTQVENTLLDNQALARVQWGQAEHQVLLGLDWSHMSAREQRYRGV 520 Query: 393 APSLNIDNPVYGVAIPAATTLFGNLEENMNQTGLYAQDQIKFDPRLTLTLGGRWDKVKDE 452 APSL+IDNPVY IPAATT FG+L++ + QTGLYAQDQI++ R+ LTLG R+D+ +D Sbjct: 521 APSLDIDNPVYTQPIPAATTRFGDLDQTLVQTGLYAQDQIRYQ-RIVLTLGARYDRSRDS 579 Query: 453 TRNYLTRATTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFLPQTGSDFNGKPFDPTKAR 512 TRN + ++++A SGR+GLSYLV+ ++APYVSY +SFLPQ G D +GKPF AR Sbjct: 580 TRNAANNSLQAAEENAFSGRVGLSYLVSPELAPYVSYGSSFLPQAGQDVDGKPFKAATAR 639 Query: 513 QAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVLSGEIKSRGLELEAKGEIV 572 Q E G+KYQP G+ ++TAAL++L K N DP H NF+V +G+++SRG+ELEAKGE++ Sbjct: 640 QIEAGVKYQPGHGRAVYTAALYQLVKDNALGSDPLHANFSVSNGQVRSRGVELEAKGELL 699 Query: 573 KGLNLSASYTYTDVKNTQNNTASLLGKQPILVPRQAASVWADYTVQGGPLAGAGIGGGAR 632 GLN++A+YTY V NTQN L+GK PILVPRQAAS+W DYTVQ G LAG G+G GAR Sbjct: 700 PGLNVTAAYTYAQVVNTQNAAPELIGKTPILVPRQAASLWLDYTVQRGDLAGMGVGAGAR 759 Query: 633 YTGSNYADAANTVKNGGVTVFDAVFHYNLNRWRYALNISNITNKEYTSCLAEPTTTCFWA 692 YTG NYA AANTV+N + DA+ + WRYA N+SN+ N++YTSCLAEPT TCFWA Sbjct: 760 YTGRNYATAANTVENAAQVILDAMVRIDRGPWRYAFNVSNLANRQYTSCLAEPTLTCFWA 819 Query: 693 AERTAILSARYRW 705 ERTA+LSARYRW Sbjct: 820 PERTAVLSARYRW 832 >gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor protein [Herbaspirillum seropedicae SmR1] Length = 817 Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust. Identities = 270/717 (37%), Positives = 380/717 (52%), Gaps = 53/717 (7%) Query: 21 AAPAWAQQQALPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEM 80 AA A +LP ++I A A+ + A+ +AS TKT TP++EVPQS+SVVT + + Sbjct: 122 AATTPAASGSLPAIQISASADPGE---QRWTARDSASTTKTATPLIEVPQSISVVTAERI 178 Query: 81 DARGVTSLLDVLRYMPGANTETHGVDPRGYEYFNLRGFINAQVTSNFLNGL-RQIPGGFG 139 A G T+ D L Y PG N +G D R Y++ NLRGF +A +L+GL + F Sbjct: 179 AAMGATTARDALGYTPGVNISPYGSDSR-YDWINLRGF-DAYSPGFYLDGLPLRNANSFA 236 Query: 140 QFRTETYGMERIEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVV 199 +RTE YG+E++ VLRGP SV +GQA PGGV+N VSKLP D P EL V +GS R+QV Sbjct: 237 VWRTENYGIEQLAVLRGPASVLYGQAGPGGVVNVVSKLPSADAPRELQVQLGSDRRRQVG 296 Query: 200 ADLNGHTQ-DGEYLWRVVGLGLDSNNQYKFSNGQSGDNNRFYLAPSLTWRPSASTSLTLM 258 AD+ G DG L+RV+G+ D+ + G N+R YLAPSL W+ SA+TSLTL Sbjct: 297 ADIGGAIDADGRLLYRVIGVVRDA----ELPAG-GMKNDRLYLAPSLVWKISAATSLTLQ 351 Query: 259 ADYMNDRSGSSRWTAVRP----------GNVLTHTL-IGDPNFDRQSNDQWSFGYQFEHK 307 A + D+ G +T RP G + L G+P+FD S DQ FGY+ H+ Sbjct: 352 AALLRDQGGV--YTRTRPLVGSLVPTAIGTTIPSELYTGNPHFDHFSQDQELFGYRLAHR 409 Query: 308 FDNAWTFRQNFRQANLKSVY--------AALNPGTLTGSV----LTRGTTVYNSQVDNTL 355 FD + F Q+ R ++ + Y A LN V LTR ++ S+ T+ Sbjct: 410 FDERFAFTQSARVGHMSTDYRAVQTPRFATLNAANPNDPVNFQNLTR--NLFGSRESATM 467 Query: 356 --VDNQLEGRLKWGATEHTVLFGLDWSRMYDREVRYR-GAAPSLNIDNPVYGVAIPAATT 412 +DNQL+ GA HTVL G+D+ R V + G+AP LNI P Y Sbjct: 468 FSIDNQLQADFSTGAVRHTVLAGVDYQRSRFDAVSFSGGSAPLLNIAAPSYPNGPFVVPA 527 Query: 413 LFGNLEENMNQTGLYAQDQIKFDPRLTLTLGGRWDKVKDETRNYLTRATTRSDDSALSGR 472 + + + QTG+Y QDQIK++ +TLGGR D N L + T S D + R Sbjct: 528 PYSDNRAVLTQTGIYLQDQIKWNNGWEVTLGGRHDSASSTVDNRLDGSRTSSTDRKFTRR 587 Query: 473 IGLSYLVTRDIAPYVSYATSFLP-QTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTA 531 + Y +APY+SY SF P T + + F P +Q EVG++YQP L++A Sbjct: 588 AAVLYHAANGLAPYLSYTESFNPTATVNPLTNQSFGPETGKQTEVGLRYQPPGTNDLYSA 647 Query: 532 ALFELTKTNVQTPDPAHTNFN-VLSGEIKSRGLELEAKGEIVKGLNLSASYTYTD-VKNT 589 ALF+L + N + D NF GEI RGLELEA + + L L+A+Y+YT T Sbjct: 648 ALFDLKRQNYISYD---ANFMPTQKGEIAVRGLELEAVTQPMAALRLTAAYSYTPRAVVT 704 Query: 590 QNNTASLLGKQPILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANT-VKNG 648 ++ + +GKQ V SVW D+ + G +G GARY + + T VK Sbjct: 705 ASSRPAEIGKQAAAVLLHQFSVWGDHRLGN----GVRLGLGARYVSATSGNGGGTPVKVP 760 Query: 649 GVTVFDAVFHYNLNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW 705 G T+ D + Y+ RW ALN+ N+T+K Y + + C++ +R+ + +A YRW Sbjct: 761 GYTLLDGLLGYDFARWSLALNLRNLTDKRYLTNCDTTASMCYYGDQRSVLATASYRW 817 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 256 bits (655), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 194/661 (29%), Positives = 315/661 (47%), Gaps = 41/661 (6%) Query: 42 TANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGANTE 101 T G Y T+SAT+T+TP+ E+PQSV VV+R +D T L DVL Y+ G + Sbjct: 42 TGQGERQQYRQSSTSSATRTETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQ 101 Query: 102 TH--GVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFGQFR-----TETYGMERIEVL 154 + G+ ++ +++RGF ++ G+ + GF R + +E ++ L Sbjct: 102 NNFGGL----WDNYSIRGFSGSEN-----GGMNILWNGFASNRGYAPPRDMANVESVDFL 152 Query: 155 RGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQDGEYLWR 214 +GP + +G ++PGG IN V+K P N L + IGS + + D G L Sbjct: 153 KGPAAALYGNSEPGGTINVVTKKPQFKSANALDLSIGSNDAYRSAVDSTGA------LSS 206 Query: 215 VVGLGLDSNNQYKFSNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSGSSRWTAV 274 V L++ ++K S + R + AP+ TW + +T L +++ ++ R Sbjct: 207 TVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLLTENTILNYEGEFLRQKAPLDRGIVA 266 Query: 275 RPGN---VLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQNF--RQANLKSVYAA 329 GN + +G+PN + E + + W R ++ +L Sbjct: 267 VNGNAGVLPVSRFLGEPNDGDIKMQNQNHLLTLEQRLNENWHLRTGIFHKEGSLDGYSTE 326 Query: 330 LNPGTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFG--LDWSRMYDREV 387 + L R + +T + ++ G+ H VL G +DW + R + Sbjct: 327 AFALQADNATLRRQRRYRDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRML 386 Query: 388 RYR--GAAP-SLNIDNPVYGVAIPAATTLFGNLEENMNQTGLYAQDQIKFDPRLTLTLGG 444 R AP ++NI NPVYG A P T E ++ TGLY QDQ+ R L G Sbjct: 387 RINPSNVAPYAVNIYNPVYGQAQPTPTANTDTSERQIS-TGLYLQDQLSLSERWRLLAGV 445 Query: 445 RWDKVKDETRNYLTRATTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFLPQTGSDFNGK 504 R D + N A TR D A S R+GL+YL+T + YVS + SF P +GSD +G Sbjct: 446 RADAFRSTLNNLRNGAVTRQDKHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDVSGN 505 Query: 505 PFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVLSGEIKSRGLE 564 F P +R AE G+K+Q D ++ T A+F++TK NV T DPA+ NF++ +GE++S+G+E Sbjct: 506 AFSPETSRAAEAGLKFQSEDKRSGATLAVFDITKQNVLTTDPANPNFSIAAGEVRSKGVE 565 Query: 565 LEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQPILVPRQAAS---VWADYTVQGGP 621 L+A + ++ + YTD +++NT +G + + +PR +AS V+ D G P Sbjct: 566 LDANARLGHHWRVTGNLAYTDAYVSRDNTLP-VGSRLVNIPRSSASLLAVFEDADAHGAP 624 Query: 622 LAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLN-RWRYALNISNITNKEYTS 680 G+GGG Y G D A + A+ ++ + + +L+++N+ NK Y S Sbjct: 625 Y---GVGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQFTPKMKLSLDVNNLFNKRYYS 681 Query: 681 C 681 Sbjct: 682 S 682 >gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore receptor signal peptide protein, tonB-dependent receptor [Herbaspirillum seropedicae SmR1] Length = 715 Score = 256 bits (654), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 214/697 (30%), Positives = 331/697 (47%), Gaps = 51/697 (7%) Query: 31 LPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLD 90 LP V + AD T + + A +T K+ TP+ E PQS+SVVTR MD++ SL D Sbjct: 48 LPTVSVTADGYTDSK----FKATQT-QVNKSSTPLSETPQSISVVTRAMMDSQQAVSLSD 102 Query: 91 VLRYMPGANTETHGVDPRGYEYFNLRGFINAQVTSN--FLNGLRQIPGGFGQFRTETYGM 148 L+ + G + +G RG++ +RG QV S+ +L+GLR + + YG+ Sbjct: 103 ALKNVSGVVAQQYG--RRGWDDLIIRG----QVASDSLYLDGLRTTASS--RVAEQLYGL 154 Query: 149 ERIEVLRGPGSVTFGQADPGGVINRVSKLP-GMDIPNELGVDIGSFNRKQVVADLNGH-T 206 +++EVL+GPGS+ +G PGG++N VSK P G D N + V IGS + Q DLN + Sbjct: 155 QQVEVLKGPGSLLYGLVLPGGLVNMVSKRPQGSDFAN-VDVTIGSHDLYQSTVDLNKSLS 213 Query: 207 QDGEYLWRVVGL---GLDSNNQYKFSNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMN 263 ++G+ +R+ GL D+ + F N Y+APSL+ A T T++ Y Sbjct: 214 ENGKQAFRINGLISNSDDATDHVWFKN--------RYIAPSLSLDLGARTDFTILTSYQE 265 Query: 264 D----RSGSSRWTAVRP---GNVLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQ 316 + G ++ P G + IG+P + ++ GY H+FD+ WT Sbjct: 266 RNYVRQQGLPLSGSITPNASGPLARSLFIGEPGARPYAANETRIGYSLTHRFDDGWTLNN 325 Query: 317 NFRQANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFG 376 N R ++ LTG+ LTR + +D ++ +H V G Sbjct: 326 NLRYQQFTMSGQLISINNLTGTSLTRSAMDQTFEGQTFTMDTNVQRSFATAWGKHEVTLG 385 Query: 377 LDW--SRMYDREVRYRGAAPSLNIDNPVYGVAIPAATTLFG-NLEEN---MNQTGLYAQD 430 D+ SR +R + P NI NP YG + T L N + N + TG YA+D Sbjct: 386 TDYMNSRELERTLTC-SVTPLSNIYNPSYGARVVCPTQLTSTNAKLNDTSVRDTGFYARD 444 Query: 431 QIKFDPRLTLTLGGRWDKVKDETRNYLTRATTRSDDSALSGRIGLSYLVTRDIAPYVSYA 490 +I R L G R D+ T + LT + + + SA + + + + PY+SYA Sbjct: 445 KISLGERWQLLAGVRQDRAATYTTSALTGSHSDNASSATTASAAIMVELWHGVRPYLSYA 504 Query: 491 TSFLPQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTN 550 TSF P +G+ F+G F P +Q E G+K +G+T ALF+L + NV DP HT+ Sbjct: 505 TSFYPNSGTAFDGSIFKPETGKQWETGVKVDLDEGRTSINFALFDLRRRNVLVTDPDHTS 564 Query: 551 FNVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTD--VKNTQNNTASLLGKQPILVPRQA 608 + + G +S+G E+ ++ GL+L+A+Y+YT V + ++ +G+ VPR Sbjct: 565 YKMAIGGQRSQGGEISVTSDLRNGLSLNAAYSYTAAIVIDDGGQRSTTVGQWLDNVPRHN 624 Query: 609 ASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLNRWRYAL 668 + A Y G L+G + GG R N G + D YN RWR AL Sbjct: 625 FTTSARYRFS-GELSGWELNGGVR---GQSMMRTNGYTLPGYVLADIGVAYNAERWRTAL 680 Query: 669 NISNITNKEYTSCLAEPTTTCFWAAERTAILSARYRW 705 N+ N+ N EY + +RT +L+ YR+ Sbjct: 681 NVKNVFNTEYYAGGLGKAVAL--GDDRTVMLTLGYRY 715 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,161,198 Number of extensions: 91251 Number of successful extensions: 332 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 256 Number of HSP's successfully gapped: 22 Length of query: 705 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 613 Effective length of database: 1,184,250 Effective search space: 725945250 Effective search space used: 725945250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)