BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0115.p (2585 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer... 3696 0.0 gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin prote... 977 0.0 >gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 2685 Score = 3696 bits (9585), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1936/2205 (87%), Positives = 2018/2205 (91%), Gaps = 31/2205 (1%) Query: 1 MNQLCYRIIFNKTRGLLMAVAETTRACAGKRAVGSRPGVALGGLPMARLSWIGLAVLLAT 60 MNQLCYRIIFNKTRGLLMAVAETTRACAGKRAVGSRPGVALGGLPMARLSWIGLAVLLAT Sbjct: 1 MNQLCYRIIFNKTRGLLMAVAETTRACAGKRAVGSRPGVALGGLPMARLSWIGLAVLLAT 60 Query: 61 GALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNR 120 GALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNR Sbjct: 61 GALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNR 120 Query: 121 AGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVI 180 AGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVI Sbjct: 121 AGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVI 180 Query: 181 IANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIEGNGLNDSQSSFTD 240 IANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSI+GNGLNDSQSSFTD Sbjct: 181 IANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIKGNGLNDSQSSFTD 240 Query: 241 LIARAAKINAGIWSKELKVTVGANQVNADNTTVTSVSADPAKPQFGIDVAQLGGMYANKI 300 LIARAAKINAGIWSKELKVTVG NQVNADNTTVT+VSADPAKPQFGIDVAQLGGMYANKI Sbjct: 241 LIARAAKINAGIWSKELKVTVGTNQVNADNTTVTAVSADPAKPQFGIDVAQLGGMYANKI 300 Query: 301 VLVGTEAGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATGQGGDIVNSGS 360 VLVGTE+GVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATGQGGDIVNSGS Sbjct: 301 VLVGTESGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATGQGGDIVNSGS 360 Query: 361 VASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAISAATGNVEVDTHGAVNNSG 420 VASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAISAATGNVEVDTHGAVNNSG Sbjct: 361 VASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAISAATGNVEVDTHGAVNNSG 420 Query: 421 KVQAAGDISISATQPQGNAAADISNTGNIEAAGQLGLTADGMLSNDGSITAQSIRAGVQG 480 KVQAAGDISISATQPQGNAAADISNTGNIEAAGQLGLTADGMLSNDGSITAQSIRAGVQG Sbjct: 421 KVQAAGDISISATQPQGNAAADISNTGNIEAAGQLGLTADGMLSNDGSITAQSIRAGVQG 480 Query: 481 LRNNGSIGTRSNAAFTLQQGLVQGANGRLSAVSDLNLTIQGDYDNAGRVQANTLTLSAAN 540 LRNNGSIGTRSNAAFTLQQGLVQGANGRLSAVSDLNLT+QGDYDNAGRVQANTLTLSAAN Sbjct: 481 LRNNGSIGTRSNAAFTLQQGLVQGANGRLSAVSDLNLTMQGDYDNAGRVQANTLTLSAAN 540 Query: 541 IGNRSGAALQAADITLTALNRLDNAGEISANRQLNITADSILNSATILGKDLVVNARTLE 600 IGNRSGAALQAADITLTALNRLDNAGEISANRQLNITADSILNSATILGKDLVVNARTLE Sbjct: 541 IGNRSGAALQAADITLTALNRLDNAGEISANRQLNITADSILNSATILGKDLVVNARTLE 600 Query: 601 NTGANALLGAGNGMSLWLTEMLANRGKAIIYSSADMAIAANGVRDANGLVNNTAQIFNED 660 NTGANALLGAGNGMSLWLTEMLANRGKAIIYSSADMAIAANGVRDANGLVNNTAQI NED Sbjct: 601 NTGANALLGAGNGMSLWLTEMLANRGKAIIYSSADMAIAANGVRDANGLVNNTAQIVNED 660 Query: 661 SVVEAGGNLDIAATNIINRRSNVSVSGVTTVDERHTLTIPSWWHAGPNPAYYDPNSANYS 720 SV+EAGGNLDIAA N+ N RS V+V+ V T+DE + + PSWWH G N YY P+S+N++ Sbjct: 661 SVIEAGGNLDIAAVNVRNTRSGVAVTTVRTLDETYAMRAPSWWHNGGNQMYYKPDSSNFN 720 Query: 721 AYEFHYVNPADVLENGTVITPDGYVIGRAVIRTHANDTVLMRDTGGGWAAYGTIRRLTAT 780 YE YVNPADVLE ++ITPDGYVIGRAVIRTHA+DTV + WA +G + R +AT Sbjct: 721 FYEMLYVNPADVLETKSIITPDGYVIGRAVIRTHADDTVFYKGLSSNWATFGQVTRGSAT 780 Query: 781 DGTRVLYYLSQSNGISNPDQVAGGDDLRNMGNGIQWSSLPSYSNQYGSCTTDCIRFHAQY 840 DGTRV+Y+ Q N +SNPD+VAGGDD RN + W +P YSNQYG+CTT+C+RF A+ Sbjct: 781 DGTRVVYFTEQRNNVSNPDKVAGGDDPRNGRGDVNWQPMPGYSNQYGNCTTNCVRFVAEV 840 Query: 841 TYTDPNSTLLKPYQKALAPELDAFERVRYAHHVAVEDQLAPGAGVAAEIRAGGNARINLG 900 YTDPN + Q+ALAP+ D+ E R AHH A ED+LA GAG AEIRAGGNA I + Sbjct: 841 DYTDPNGIFRRDTQRALAPQHDSLELTRNAHHTASEDRLAAGAGAVAEIRAGGNANIRIA 900 Query: 901 QSLQNQFSNIVVTGALTLGGAGADITNTGQTLYRRHTFDGTFVTTGGLTVGFSNPSISEV 960 QSL N+FSNIVV+GAL LGG ADI N GQTLYRRH+FDG FVTTGG G+S P ISEV Sbjct: 901 QSLNNEFSNIVVSGALWLGGGNADINNLGQTLYRRHSFDGNFVTTGGTVTGYSMPDISEV 960 Query: 961 IGTTQGAIVGKQGVTITARNFSNADIAAGSAANIRSDVILTTGSGQSVGSALNDASARPG 1020 IGTTQGAIVGKQGV I ARNFSNADIAAGSAANIRSD+ LTTGSGQSVGS LNDASARPG Sbjct: 961 IGTTQGAIVGKQGVNIMARNFSNADIAAGSAANIRSDLTLTTGSGQSVGSVLNDASARPG 1020 Query: 1021 ATAPDAPVPVRPNPMFVPATSGNYLLETRTQFTDRRTWLSSDYLLTALNVDPSTTQKRLG 1080 ATAPDAPVPVRPNPMFVPATSGNYLLETRTQFTDRRTWLSSDYLLTALNVDPSTTQKRLG Sbjct: 1021 ATAPDAPVPVRPNPMFVPATSGNYLLETRTQFTDRRTWLSSDYLLTALNVDPSTTQKRLG 1080 Query: 1081 DGFYEQRMVREQMAQLTGRPSGSFNDDSQYQKLLSNAVSVAQSWNLRPGVALTPDQVSHL 1140 DGFYEQRMVREQMAQLTGRPSGSFNDDSQYQKLL+NAVSVAQSWNLRPGVALTPDQVSHL Sbjct: 1081 DGFYEQRMVREQMAQLTGRPSGSFNDDSQYQKLLNNAVSVAQSWNLRPGVALTPDQVSHL 1140 Query: 1141 TSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALKNSGALVSGDNITIQAENISNKG 1200 TSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALKNSGALVSGDNITIQAENISNKG Sbjct: 1141 TSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALKNSGALVSGDNITIQAENISNKG 1200 Query: 1201 GFIDGRASGTGRTVLVASNDIANLGGGISGDEVVISAGRNVRNETLTTTESYNNGQTRGS 1260 GFIDGRASGTGRTVLVASNDIANLGGGISGDE+VISAGRNVRNETLTTT++YNNGQT GS Sbjct: 1201 GFIDGRASGTGRTVLVASNDIANLGGGISGDEIVISAGRNVRNETLTTTQTYNNGQTSGS 1260 Query: 1261 YTSLSNQGSIAAGKNLTITAGADITNLGATLASGRSGDAAAGKLSMSAGRDINLGTVKTG 1320 YTSLSNQGSIAA KNLTITAGADITNLGAT+ASGRSGDAA GKLSMSAGRDINLGTVKTG Sbjct: 1261 YTSLSNQGSIAADKNLTITAGADITNLGATVASGRSGDAATGKLSMSAGRDINLGTVKTG 1320 Query: 1321 STYDANFSGYLGRAQSVTSVGSTVNAGGDTVAHAQRDLSLTAXPRS-------------- 1366 STYDANFSGY G AQSV+SVGSTVNAGGD AQRDLSLTA + Sbjct: 1321 STYDANFSGYFGHAQSVSSVGSTVNAGGDLTMVAQRDLSLTAAQVAIGTNGSGNGSLMAG 1380 Query: 1367 -------------SEISHTASKSYTQANDESVTVRGSNINASGGVSIKAGLTEKADVKVA 1413 S I AS+SY++A+DESV VRGSNI+A+GG+SIKAGL EKADVKVA Sbjct: 1381 RAVTIGAALDRAESTIGRAASRSYSRADDESVAVRGSNIDAAGGISIKAGLMEKADVKVA 1440 Query: 1414 ASNITAGKALEVAASGDINVVSEESYQSHSEYAKSTSRGLASSTTRTSYGKRAYTNAVGS 1473 AS+ITAGKALEVAA+GDINVVSEES+QSHSEYAKSTSRGL SSTTRTSYGKRAYTNAVGS Sbjct: 1441 ASSITAGKALEVAATGDINVVSEESFQSHSEYAKSTSRGLLSSTTRTSYGKRAYTNAVGS 1500 Query: 1474 TLSGDTTVLQAGKDMSIVGSNVVSSAGTSLVAGNNITVASASDKFESAEGSNKKSSGLLS 1533 TLSGDTTVLQAGKDMSIVGSNVVSSAGTSLVA NNITVASASDK ESAEGSNKKSSGLLS Sbjct: 1501 TLSGDTTVLQAGKDMSIVGSNVVSSAGTSLVAANNITVASASDKVESAEGSNKKSSGLLS 1560 Query: 1534 GGGFGFTIGTRELDNKNTSVRTTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDV 1593 GGG GFTIGTRELDNKNT+V +TAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDV Sbjct: 1561 GGGLGFTIGTRELDNKNTTVNSTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDV 1620 Query: 1594 AAKQISILAAAETERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLL 1653 AKQISILAAAETERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLL Sbjct: 1621 VAKQISILAAAETERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLL 1680 Query: 1654 AAANIGFAGKNAVDAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAAD 1713 AAANIGFAGKNAVDAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAAD Sbjct: 1681 AAANIGFAGKNAVDAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAAD 1740 Query: 1714 KAGGINLAISVGASKSENHSQSSASTARGSTLNAGGNINLTAQGGGADSNVIVQGSDIRS 1773 KAGGINLAISVGASKSENHSQSSASTARGSTLNAGGNI+LTAQGGGADSNVIVQGSDIRS Sbjct: 1741 KAGGINLAISVGASKSENHSQSSASTARGSTLNAGGNISLTAQGGGADSNVIVQGSDIRS 1800 Query: 1774 GANTLLKADNEVRLLAAQSTTEQNSSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSD 1833 GANTLLKADNEVRLLAAQSTTEQ+SSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSD Sbjct: 1801 GANTLLKADNEVRLLAAQSTTEQSSSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSD 1860 Query: 1834 VAQVNTHVDAGNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSR 1893 VAQVNTHVDAGNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSR Sbjct: 1861 VAQVNTHVDAGNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSR 1920 Query: 1894 QQSAGVSISAGMGRMSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAK 1953 QQSAGVSISAGMGRMSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAK Sbjct: 1921 QQSAGVSISAGMGRMSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAK 1980 Query: 1954 IASTDKAAADGKNSLTTETLTQSDIKNRSDFKAESQSVGMGTSLAGSVLGLAGSALGMGN 2013 IASTDKAAADGKNSLTTETLTQSDIKNRSDFKAESQSVGMGT+LAGSVLGLAGSALG GN Sbjct: 1981 IASTDKAAADGKNSLTTETLTQSDIKNRSDFKAESQSVGMGTNLAGSVLGLAGSALGRGN 2040 Query: 2014 VSGSDSSTTRSGISQADIKITDDAAQQVKTGKTAEQTIASINGDVSSERDTSGKIAKTWN 2073 VSGSDSSTTRSGISQADIKITDDAAQQ KTGKTAEQTIASIN DVSSERDTSGKIAKTWN Sbjct: 2041 VSGSDSSTTRSGISQADIKITDDAAQQAKTGKTAEQTIASINADVSSERDTSGKIAKTWN 2100 Query: 2074 GQALQADVEARAQIMEMFGKNAAREIGNYATKQVNELDDKISVAKT--DEEKA-ALAEER 2130 GQ LQADVEA+A+I FG+ A+ G YA + EL S A D+ +A L E Sbjct: 2101 GQELQADVEAQAEITRAFGQQVAQLAGAYAESKEKELRQAASNAAQNGDQTQALLLGAEA 2160 Query: 2131 TKWVEGGLYRGALHAAAGLLSGGIEG-AMGAAASSVAMPQLVNLI 2174 +W +GG + AL A L+ GG+ G + G ++ + P L + I Sbjct: 2161 DQWKDGGENKRALKAITTLVIGGLGGQSAGQLLANASAPYLADAI 2205 >gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin protein [Herbaspirillum seropedicae SmR1] Length = 2658 Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust. Identities = 846/2429 (34%), Positives = 1221/2429 (50%), Gaps = 428/2429 (17%) Query: 63 LVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNRAG 122 ++ +P Y QI+ADPNA ++PVV NTANG P V I TPSAAGVS N YSQF+V G Sbjct: 29 MLCVVPPGYPQIVADPNAGAGKRPVVDNTANGRPLVQIATPSAAGVSHNQYSQFNVGPNG 88 Query: 123 AILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVIIA 182 AILNN+R V TQ GG+V NPNL G ARVILNEV S++PS LRG+ EVAG RA+VIIA Sbjct: 89 AILNNARDVVLTQQGGYVGANPNLQGGAARVILNEVTSTSPSQLRGYTEVAGQRAEVIIA 148 Query: 183 NPSGVTCDGCGFINASRSTLTTGTPIIN-NGSLDGYLVRGGVVSIEGNGLNDSQSSFTDL 241 NP+G++CDGCGFIN SR LTTG P+ NGSL+ + V G + I GLN + + DL Sbjct: 149 NPNGISCDGCGFINTSRGVLTTGVPLFGGNGSLEAFRVSRGAIQIGSGGLNGANTDQLDL 208 Query: 242 IARAAKINAGIWSKELKVTVGANQVNADNTTVTSVSADPAKPQFGIDVAQLGGMYANKIV 301 IAR+ ++N +W L + GAN+VN + ++ ++ + P G+DVA++GGMYA KI+ Sbjct: 209 IARSVQVNGELWGNRLNLVTGANRVNYGDLGLSVIAGEGNAPTIGVDVARMGGMYAQKIM 268 Query: 302 LVGTEAGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVR-ATGQGGDIVNSGS 360 LVGTE GVGVR+ G + A AG TL++ G+I SG +A+ + ++ A G D Sbjct: 269 LVGTENGVGVRSLGTLAAQAGSFTLSSQGQIALSGKTSASDDIVLKSAVGTSND-----G 323 Query: 361 VASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAISAAT---------GNVEVD 411 V + +LQ G I N+ T+SAQ + +TAA L+++G ++A GN+ V Sbjct: 324 VLYAGRNAQLQG-GVIENAGTLSAQGNLDITAAQLRSTGTLAAGVDQAGNVAQAGNLTVT 382 Query: 412 THGAVNNSGKVQA------------------------------------------AGDIS 429 G V +G +A AGD+ Sbjct: 383 ASGDVLATGVNRAGADLQLVGGKIDLSHSSSSAGRKLGAQASDALTLGGATVETLAGDLE 442 Query: 430 I-------------SATQPQGNAAADISNTG-NIEAAGQLGLTADGMLSNDGSITAQSIR 475 + S+ + NA A +SN G I +AG + +TA + ++ G I+A + Sbjct: 443 LGGATITLDGAKLTSSADARINAVAGLSNRGGEITSAGAMNVTAASVDNSAGMISAATGG 502 Query: 476 AGVQGLRNNGSIGT--------------------------RSNAAFTLQQGLVQGANGRL 509 AGV LR+ GSI +A +LQ L A + Sbjct: 503 AGVLSLRSAGSISNGQGRIAAGAALNLAAASIQGQGSVIANGDATLSLQS-LNNEAGSLI 561 Query: 510 SAVSDLNLTIQGDYDNAGRVQA-NTLTLSAANIGNRSGAALQAADITLTALN-RLDNAGE 567 + DL +T G N G ++A L L+A+ I N +G + AA TL ALN ++NAG+ Sbjct: 562 QSNRDLRITTSGATGNQGALKAIGALNLTASQIDNAAGGDISAAATTLQALNGDINNAGK 621 Query: 568 ISANRQLNITADSILNSATILGKDLVVNARTLENTGANALLGAGNGMSLWLTEMLANRGK 627 I N + T++++ N +++G D+ +NA L N+GA A + A N + ++ L N+ Sbjct: 622 IGGN-TIATTSNALNNQGSMIGGDVTINADRLNNSGAAAAIAATNSVQAFVRSALTNQDN 680 Query: 628 AIIYSSADMAIAANGVRDANG-LVNNTAQIFNEDSVVEAGGNLDIAATNIINRRSNVSVS 686 A+IYS + IAA+ + A G ++ T + N + +EAGG+L ++A I+N+RS Sbjct: 681 ALIYSLGKLVIAADATQSAAGDYLHRTGTLTNSSATIEAGGDLAVSADTIVNKRS----- 735 Query: 687 GVTTVDERHTLTIPSWWHAGPNPAYYDPNSANYSAYEFHYVNPADVLENGTVITPDGYVI 746 T V R W Y +++ + + PD + Sbjct: 736 --TLVIARDIFDGTESWQK----------------YNYYWRSWGSGMSG-----PDSAGL 772 Query: 747 GRAVIRTHANDTVLMRDTGGGWAAYGTIRRLTATDGTRVLYYLSQSNGISNPDQVAGGDD 806 AV RT + D + YG+I +L + R L SN + Sbjct: 773 MAAVTRT-----LPFNDASAFGSRYGSILQLDLSS-NRALVQFQGSNQL----------- 815 Query: 807 LRNMGNGIQWSSLPSYSNQYGSCTTDCIRFHAQYTYTDPNSTLLKPYQKALAPEL----- 861 W S + Q + D + + + + + L PYQ+ + E Sbjct: 816 ---------WVSYKAI-KQNADGSYDMTFYEGK----NCDGSTLCPYQQMVWREYTGSRV 861 Query: 862 -DAFERVRYA---------------------------HHVAVEDQLAPGAGVAAEIRAGG 893 D F+ RY +H A+ AA++ A G Sbjct: 862 QDQFDPSRYTSPAELKGIGTNGESAYDFRERSYNGSNYHDAI-----TAMSDAAKLNASG 916 Query: 894 NARINLGQSLQNQFSNIVVTGALTLGGA------GADITNTGQTLYRRHTFDGTFVTTGG 947 IN +L N S+I+ GALT+ GA G + N G ++ R T GT V Sbjct: 917 RITINTA-ALTNDASDIIAGGALTINGANGSAASGGVVNNIGYSINR--TAIGTAVDHYD 973 Query: 948 LTVG---FSNPSISEV--IGTTQGAIVGKQGVTITARNFSNADIAAGSAANIRSDVILTT 1002 VG ++ +++EV + T I Q V+I+A+N +N + A + + T Sbjct: 974 RHVGHHTYTTLNLTEVTALQTIDANIQSNQAVSISAQNLNNTTVGAAT--------VPTR 1025 Query: 1003 GSGQSVGSALNDASARPGATAPDAPV-PVRPNPMFVPATSGNYLLETRTQFTDRRTWLSS 1061 G VG A T P + VRP P YL+ET +FTD +T+L S Sbjct: 1026 AGG--VGHA--------NITLPAGGLFTVRPEP------GQRYLVETDRRFTDYKTFLGS 1069 Query: 1062 DYLLTALNVDPSTTQKRLGDGFYEQRMVREQMAQLTGRP--SGSFNDDSQYQKLLSNAVS 1119 DY+L L +DPS TQKRLGDGFYEQ+++ +Q+AQLTG+ G N ++QY+ L+ + V+ Sbjct: 1070 DYMLGRLTMDPSMTQKRLGDGFYEQKLINDQIAQLTGKKFLDGYTNAEAQYKALMDSGVA 1129 Query: 1120 VAQSWNLRPGVALTPDQVSHLTSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALKN 1179 A S+ L PG+AL+ DQ++ LTSDIVW+ +V L DG + LVP +YLAH L+ Sbjct: 1130 SAASFKLTPGIALSADQMAALTSDIVWMVDTEVTLADGSRQHALVPTVYLAHGGSATLQA 1189 Query: 1180 SGALVSGDNITIQAENISNKGGFIDGRASGTGRTVLVASNDIANLGGGISGDEVVISAGR 1239 SGAL+ G ++T+ A+ ++N G RA + VA+ DI N GG + GD+V + A Sbjct: 1190 SGALIGGRDVTLAADTVNNSGIV---RAE---DKLAVAARDINNTGGELRGDKVDVLA-- 1241 Query: 1240 NVRNETLTTTESYNNGQTRGSYT----SLS--------------NQGSIAAGKNLTI--- 1278 ETL + N +GS T SL+ + +AA NLTI Sbjct: 1242 ---TETLNIGTDFQNYGRQGSVTGRQVSLAANDINIIGAKIKADDTLKLAAQNNLTIAAA 1298 Query: 1279 TAGADIT---------------------------NLGATLASGRSGDAAAGK-------- 1303 TA D+ LG+T+ +G AAG+ Sbjct: 1299 TAQHDVKLTWSGAGEREENHGMMRNGGVTAQLQQALGSTIEAGGDASFAAGRNIAVRGSS 1358 Query: 1304 ------LSMSAGRDINLGTVKTGS---------TYDANFSGY--------LGRAQSVTSV 1340 ++ AG + + VKT + YD N G+ + + ++ V Sbjct: 1359 IDVKGNAALLAGGSVEVSAVKTATDSVVTGRSDRYDLNVVGHTENLTTSQIAAGKGLSIV 1418 Query: 1341 GSTVNAGGDTVAHAQR--------------DLSLTAXPRSSE--ISHTASKSYTQANDES 1384 S N GD A R D+S+ A ++++ I K++ + +D S Sbjct: 1419 ASGQNGSGDITLAASRLSSKEGEVTLNAAGDISIGAMQKNNDNRIDERGGKAWMKTHDSS 1478 Query: 1385 VTVRGSNINASGGVSIKAGLTEKADVKVAASNITAGKALEVAASGDINVVSEESYQSHSE 1444 GS I GV++ A A V VA S+I + + + A GD+ V S + Sbjct: 1479 SVAAGSLIEGEKGVNLIATGRSDAKVSVAGSDIYSNGTIAIQAKGDVTVAETRSSSDEWQ 1538 Query: 1445 YAKSTSRGLAS--STTRTSYGKRAYTNAVGSTLSGDTTVLQAGKDMSIVGSNVVSSAGTS 1502 A S SRG S S+ RT ++ N GSTLSG+ V+ AG+++++ GS VVS+ TS Sbjct: 1539 QAHSESRGFLSRSSSDRTDQVRQDMAN--GSTLSGNKVVIDAGRNIAVRGSEVVSTELTS 1596 Query: 1503 LVAGNNITVASASDKFESAEGSNKKSSGLLSGGGFGFTIGTR-ELDNKNTSVRTTAVSSN 1561 L A N++++ + + E + + SGL+ G GFG +IG++ ++ N N S T S+ Sbjct: 1597 LRAANDVSITTTQNFTEQSHYKEDRKSGLM-GAGFGISIGSQGQMANGNGSSVTNNAST- 1654 Query: 1562 VGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDVAAKQISILAAAETERSTQDMVFKQSGLT 1621 VGS++GNV+I AGNA+ Q GS V+AP+GDI++ AK + I AA + TQ+ FKQSGLT Sbjct: 1655 VGSVNGNVNIIAGNAFRQIGSQVVAPQGDINILAKSVDIGAAYDASVYTQENKFKQSGLT 1714 Query: 1622 IQITSPVLSAIQTAQQMAQAAKSTSGGRMQLLAAANIGFAGKNAVDAVRTGQGFAVDGKD 1681 + I SPV+S +QT QQ+ QA + T RMQ LAAA + KNA DA G A+ Sbjct: 1715 LAINSPVISVLQTGQQLIQAGQKTPDKRMQALAAATL---AKNAYDA-----GAAL---- 1762 Query: 1682 NPQVRTNALDENGDLKLGADKKPETRDATAADKAGGINLAISVGASKSENHSQSSASTAR 1741 DK +T G+ + +S+G+S+S N ++S A Sbjct: 1763 ------------------IDKPTDTS---------GVKITLSLGSSQSSNKVTQASSQAV 1795 Query: 1742 GSTLNAGGNINLTAQGGGADSNVIVQGSDIRSGANTLLKADNEVRLLAAQSTTEQNSSNK 1801 GST+ AGG +N+ A GG S++ V GS I +G + L AD+E+ LLAAQS Q+ +N Sbjct: 1796 GSTVAAGGAVNIVAS-GGPRSDINVVGSAISAGGDVSLVADHEINLLAAQSAYSQHGNNN 1854 Query: 1802 AMSGSVGISIGT----DGFLVNAGLSGSRGRGDGSDVAQVNTHVDAGNKLTIASGTDTTI 1857 + S+GI +GF + G + +RG DG D+ + + AGN+ ++ SG DT + Sbjct: 1855 SSGASIGIGFAMGGSQNGFTLELGANRARGNLDGDDLVNKASTISAGNQASLISGGDTNV 1914 Query: 1858 KGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSRQQSAGVSISAGM-----GRMSGSL 1912 +G+ S K V +G G+LNIESLQD STY S+Q SAGV +S + G S S Sbjct: 1915 RGSTVSAKTVAAAIG----GDLNIESLQDKSTYGSKQSSAGVGLSLCIPPFCYGASSVSG 1970 Query: 1913 NLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAKIASTDKAAADGKNSLTTET 1972 +L+ S G+Y SV Q+GIKAGD GF++ VAGNTDLKGA I+ST KA DGKN L T T Sbjct: 1971 SLSGSKAKGDYQSVVTQAGIKAGDGGFRLVVAGNTDLKGAVISSTAKAIEDGKNFLQTGT 2030 Query: 1973 LTQSDIKNRSDFKAESQSV--GMGTSL--------------AGSVLGLAGSALGMGNVSG 2016 LT SDI N ++A SV M + L A S G GS G + G Sbjct: 2031 LTYSDISNHDAYEASGYSVSGSMSSQLGDQSKAKTEADKAAANSRTGPGGSP-GYSDTGG 2089 Query: 2017 SDSSTTRSGISQADIKITDDAAQQVKTGKTAEQTIASINGDVSSERDTSGKIAKTWNGQA 2076 S SS TRSGIS + ITD+ Q+ TG++AEQ +AS+N DV S +D+SG ++K W+G+A Sbjct: 2090 SQSSVTRSGISGGTVIITDEQGQKAATGQSAEQILASLNRDVDSSKDSSGALSKAWDGEA 2149 Query: 2077 LQADVEARAQIMEMFGKNAAREIGNYATKQVNELDDKISVAKTD---EEKAALAEERTKW 2133 L+ VEA AQI + FG+ A+ IG+YA + +L + A+ D E+ A L E +W Sbjct: 2150 LRQQVEAEAQIRQAFGQTVAKSIGDYADTKERDLKNAAKQAEQDGDAEQAAKLRAEAARW 2209 Query: 2134 VEGGLYRGALHAAAGLLSGGIEGAMGAAASSVAMPQLVNLINGTSLPLAIRQTLAQATAA 2193 E G R A+HAAAG LSGG+ GA AAA S MP L I LP + +A A A+ Sbjct: 2210 GEDGTARAAVHAAAGALSGGLAGAASAAAVSKLMPSLAEQIKKMGLPSELEGVVAAAAAS 2269 Query: 2194 ALGGVVGGNAGLIAGLNVEANNRQLHQTE 2222 LG ++GG+AG + V+ NNRQLHQ+E Sbjct: 2270 GLGAIIGGSAGAATAVTVDLNNRQLHQSE 2298 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.310 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 6,991,160 Number of extensions: 285215 Number of successful extensions: 1244 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 1091 Number of HSP's successfully gapped: 11 Length of query: 2585 Length of database: 1,619,870 Length adjustment: 102 Effective length of query: 2483 Effective length of database: 1,136,900 Effective search space: 2822922700 Effective search space used: 2822922700 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 139 (58.2 bits)