BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0111.p
         (151 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312551|ref|YP_003776643.1| ferrisiderophore receptor prote...   307   2e-85
gi|300312552|ref|YP_003776644.1| TonB-dependent outer membrane i...   191   3e-50

>gi|300312551|ref|YP_003776643.1| ferrisiderophore receptor protein
           [Herbaspirillum seropedicae SmR1]
          Length = 755

 Score =  307 bits (787), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 148/150 (98%), Positives = 149/150 (99%)

Query: 2   ITQGLELGVTGDLSPTVSLTAGYSHMQSQVSRGALVSATGENFLAYAPRRSFTSWASWRL 61
           ITQGLELGVTGDLSPTVSLTAGYSHMQSQVSRGALVSATGENFLAYAPRRSFTSW SWRL
Sbjct: 606 ITQGLELGVTGDLSPTVSLTAGYSHMQSQVSRGALVSATGENFLAYAPRRSFTSWVSWRL 665

Query: 62  PQGFTLGGGLRYSGGLLRGRDTNAIGTPKDTGAYWVADVMASYVIHRHAEIQLNVNNLFN 121
           PQGFTLGGGLRYSGGLLRGRDTNAIGTPKDTGAYWVADVMASYVIH+HAEIQLNVNNLFN
Sbjct: 666 PQGFTLGGGLRYSGGLLRGRDTNAIGTPKDTGAYWVADVMASYVIHQHAEIQLNVNNLFN 725

Query: 122 NSYVRSINKSGYRYLPGDARNISLTGNFHF 151
           NSYVRSINKSGYRYLPGDARNISLTGNFHF
Sbjct: 726 NSYVRSINKSGYRYLPGDARNISLTGNFHF 755


>gi|300312552|ref|YP_003776644.1| TonB-dependent outer membrane iron
           monomeric catechols receptor protein [Herbaspirillum
           seropedicae SmR1]
          Length = 799

 Score =  191 bits (484), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 116/148 (78%)

Query: 4   QGLELGVTGDLSPTVSLTAGYSHMQSQVSRGALVSATGENFLAYAPRRSFTSWASWRLPQ 63
           QG+ELGVTG+++P +SLTAGY++M+++V  GA+V+A+GEN LAY PR++FTSWA++RLP+
Sbjct: 652 QGVELGVTGEVTPDLSLTAGYTYMKTKVDSGAIVTASGENTLAYTPRQAFTSWATYRLPK 711

Query: 64  GFTLGGGLRYSGGLLRGRDTNAIGTPKDTGAYWVADVMASYVIHRHAEIQLNVNNLFNNS 123
           GFTLGGG RY   L+RG D    GTPK   +YWV D MA YV++++ ++QLN+ N+FN  
Sbjct: 712 GFTLGGGARYVSSLVRGSDNPTSGTPKYADSYWVFDAMAGYVVNKNLDLQLNLYNIFNKD 771

Query: 124 YVRSINKSGYRYLPGDARNISLTGNFHF 151
           YV +INKSGYRY PG  R ++LT N  F
Sbjct: 772 YVAAINKSGYRYTPGTPRAVTLTANLKF 799


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 451,606
Number of extensions: 14959
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 6
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 6
Length of query: 151
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 74
Effective length of database: 1,255,275
Effective search space: 92890350
Effective search space used: 92890350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)