BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0097.p
         (432 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312562|ref|YP_003776654.1| guanine deaminase [Herbaspirill...   889   0.0  
gi|300312557|ref|YP_003776649.1| hydroxy-atrazine ethyl amino hy...    96   5e-21

>gi|300312562|ref|YP_003776654.1| guanine deaminase [Herbaspirillum
           seropedicae SmR1]
          Length = 432

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/432 (99%), Positives = 431/432 (99%)

Query: 1   MNTPLHAYRASLLYFTNDPAFDEHATRWHSDGLLLVQDGKIRAAGDYAELSASLPPEAVT 60
           MNTPLHAYRASLLYFTNDPAFDEHATRWHSDGLLLVQDGKIRAAGDYAELSASLPPEAVT
Sbjct: 1   MNTPLHAYRASLLYFTNDPAFDEHATRWHSDGLLLVQDGKIRAAGDYAELSASLPPEAVT 60

Query: 61  EDLRGKILCPGFIDTHVHYPQTDIIGSPAPGLLPWLDNYTFPAERRFQQPEHATEVADFF 120
           EDLRGKILCPGFIDTHVHYPQTDIIGSPAPGLLPWLDNYTFPAERRFQQPEHA EVADFF
Sbjct: 61  EDLRGKILCPGFIDTHVHYPQTDIIGSPAPGLLPWLDNYTFPAERRFQQPEHAAEVADFF 120

Query: 121 LAELLRNGTTSAAVYCTVHPQSVDAFFAASHARNLRMVAGKCLMDRHAPDFLRDTAESGV 180
           LAELLRNGTTSAAVYCTVHPQSVDAFFAASHARNLRMVAGKCLMDRHAPDFLRDTAESGV
Sbjct: 121 LAELLRNGTTSAAVYCTVHPQSVDAFFAASHARNLRMVAGKCLMDRHAPDFLRDTAESGV 180

Query: 181 RESEALIGRWHNKGRQHYAITVRFAPTSTHEQMKLAGELAAQYPDTYIQTHVAENTDEVK 240
           RESEALIGRWHNKGRQHYAITVRFAPTSTHEQMKLAGELAAQYPDTYIQTHVAENTDEVK
Sbjct: 181 RESEALIGRWHNKGRQHYAITVRFAPTSTHEQMKLAGELAAQYPDTYIQTHVAENTDEVK 240

Query: 241 WVKELYPDARSYLDVYDGYGLMRQRALYAHCIWLDDQDRARMAATQSAATLCPTSNLFLG 300
           WVKELYPDARSYLDVYDGYGLMRQRALYAHCIWLDDQDRARMAATQSAATLCPTSNLFLG
Sbjct: 241 WVKELYPDARSYLDVYDGYGLMRQRALYAHCIWLDDQDRARMAATQSAATLCPTSNLFLG 300

Query: 301 SGLFDFARADAARLPLSLATDVGGGTSFSMLQTMNELYKVARMGGTYLPAQRMFYLATLG 360
           SGLFDFARADAARLPLS+ATDVGGGTSFSMLQTMNELYKVARMGGTYLPAQRMFYLATLG
Sbjct: 301 SGLFDFARADAARLPLSVATDVGGGTSFSMLQTMNELYKVARMGGTYLPAQRMFYLATLG 360

Query: 361 GARALQLEGTIGSFTPGCDADFIVLDPQATPLLARRSATTENLEEQLFALAILGDDRAVA 420
           GARALQLEGTIGSFTPGCDADFIVLDPQATPLLARRSATTENLEEQLFALAILGDDRAVA
Sbjct: 361 GARALQLEGTIGSFTPGCDADFIVLDPQATPLLARRSATTENLEEQLFALAILGDDRAVA 420

Query: 421 ATYSAGVRVHQR 432
           ATYSAGVRVHQR
Sbjct: 421 ATYSAGVRVHQR 432


>gi|300312557|ref|YP_003776649.1| hydroxy-atrazine ethyl amino
           hydrolase [Herbaspirillum seropedicae SmR1]
          Length = 458

 Score = 96.3 bits (238), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 167/376 (44%), Gaps = 32/376 (8%)

Query: 31  DGLLLVQDGKIRAAGDYAELSASLPPEAVTE--DLRGKILCPGFIDTHVHYPQ--TDIIG 86
           DG L +++  I   G  A+L     P+   E  D R  I+ PG I+TH H  Q  T  I 
Sbjct: 30  DGALYIRNNVIEQVGQTADL-----PQDADEIIDARHHIVLPGLINTHHHMYQSLTRAIP 84

Query: 87  SPAPG-LLPWLDNYTFPAERRFQQPEHATEVADFFLAELLRNGTTSAAVYCTVHPQS--V 143
           S   G L  WL    +P       PE         +AEL+ +G T+++ +  ++P    +
Sbjct: 85  SAQNGELFNWLTKL-YPIWAGLT-PEMIQVSTLTAMAELILSGCTTSSDHLYIYPNQTRL 142

Query: 144 DAFFAASHARNLRMVAGKCLMDRHA------PDFLRDTAESGVRESEALIGRWHNKGRQH 197
           D    A+    +R    +  M          PD +     + +++++ LI  +H+  R H
Sbjct: 143 DDSLEAAARIGMRFHGARGAMSVGQSKGGLPPDRVVQDEAAILKDTQRLIETYHDHQR-H 201

Query: 198 YAITVRFAPTS----THEQMKLAGELAAQYPDTYIQTHVAENTDEVKWVKELYPDARSYL 253
               +  AP S    + E M+ A +LA  Y    + TH+AEN +++ + +E +    S  
Sbjct: 202 AMQRIVVAPCSPFSVSRELMREAADLARHY-GVSLHTHLAENVNDIAYSREKF--NMSPA 258

Query: 254 DVYDGYGLMRQRALYAHCIWLDDQDRARMAATQSAATLCPTSNLFLGSGLFDFARADAAR 313
           +  +  G +     +AHC+ LD       A T +    CP SN+ L SG+    +   A 
Sbjct: 259 EYAEDCGWVGHDVWHAHCVQLDAHGIDLFARTGTGVAHCPCSNMRLASGIAPIRKMLDAG 318

Query: 314 LPLSLATD-VGGGTSFSMLQTMNELYKVARM--GGTYLPAQRMFYLATLGGARALQLEGT 370
           +P+ L  D      S  ML  + +   + R+  G   + A++   +ATLGGA+ L  +  
Sbjct: 319 VPVGLGVDGSASNDSAHMLGEVRQAMLLQRVGFGPDAMTARQALEVATLGGAKVLNRD-D 377

Query: 371 IGSFTPGCDADFIVLD 386
           IG+  PG  AD ++ D
Sbjct: 378 IGALKPGMSADVVMFD 393


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,456,523
Number of extensions: 63592
Number of successful extensions: 193
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 2
Length of query: 432
Length of database: 1,619,870
Length adjustment: 88
Effective length of query: 344
Effective length of database: 1,203,190
Effective search space: 413897360
Effective search space used: 413897360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 132 (55.5 bits)