BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0046.p
         (410 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312607|ref|YP_003776699.1| phospholipase A1 protein [Herba...   823   0.0  

>gi|300312607|ref|YP_003776699.1| phospholipase A1 protein
           [Herbaspirillum seropedicae SmR1]
          Length = 438

 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/410 (99%), Positives = 409/410 (99%)

Query: 1   LLIGMPAHAGITLVQPPKRIDASKPLELTLLVSEEDQPERTYTLPSTLLVAASADMIPPQ 60
           LLIGMPAHAGITLVQPPKRID SKPLELTLLVSEEDQPERTYTLPSTLLVAASADMIPPQ
Sbjct: 29  LLIGMPAHAGITLVQPPKRIDVSKPLELTLLVSEEDQPERTYTLPSTLLVAASADMIPPQ 88

Query: 61  QISLQRVDSEGSITLRQGQFRKLRYRGMLPERLRGMVRIEPIGMDAAPVLVAVVRPDAAL 120
           QISLQRVDSEGSITLRQGQFRKLRYRGMLPERLRGMVRIEPIGMDAAPVLVAVVRPDAAL
Sbjct: 89  QISLQRVDSEGSITLRQGQFRKLRYRGMLPERLRGMVRIEPIGMDAAPVLVAVVRPDAAL 148

Query: 121 GALPESPDLINTPLADSSSTVAPVAPSATVFTPGADASPLDSAPAAEDILSNNRRLSFNE 180
           GALPESPDLINTPLADSSSTVAPVAPSATVFTPGADASPLDSAPAAEDILSNNRRLSFNE
Sbjct: 149 GALPESPDLINTPLADSSSTVAPVAPSATVFTPGADASPLDSAPAAEDILSNNRRLSFNE 208

Query: 181 PMYFSVGNSGGDTNARFQLSLKFRLFVPDDPRSRGPLDNLYLGYTQFSLWDLSAPSAPFR 240
           PMYFSVGNSGGDTNARFQLSLKFRLFVPDDPRSRGPLDNLYLGYTQFSLWDLSAPSAPFR
Sbjct: 209 PMYFSVGNSGGDTNARFQLSLKFRLFVPDDPRSRGPLDNLYLGYTQFSLWDLSAPSAPFR 268

Query: 241 DTSYRPSLFYYLPDVGVQNRVLSRIGIATGLEHESNGRDGAQSRSINTYFIEPSFNFGNL 300
           DTSYRPSLFYYLPDVG+QNRVLSRIGIATGLEHESNGRDGAQSRSINTYFIEPSFNFGNL
Sbjct: 269 DTSYRPSLFYYLPDVGIQNRVLSRIGIATGLEHESNGRDGAQSRSINTYFIEPSFNFGNL 328

Query: 301 NDYHFKVAPKLYAYLGPTRDNPDIGDYRGHMDLKLSYGKPDGLEVATMLRKGRLGGTLTS 360
           NDYHFKVAPK+YAYLGPTRDNPDIGDYRGHMDLKLSYGKPDGLEVATMLRKGRLGGTLTS
Sbjct: 329 NDYHFKVAPKVYAYLGPTRDNPDIGDYRGHMDLKLSYGKPDGLEVATMLRKGRLGGTLTS 388

Query: 361 QTQVSYPLSRLLPGTAGYLMASYFHGYGESLLTYNQKDRAQFRIGYALWR 410
           QTQVSYPLSRLLPGTAGYLMASYFHGYGESLLTYNQKDRAQFRIGYALWR
Sbjct: 389 QTQVSYPLSRLLPGTAGYLMASYFHGYGESLLTYNQKDRAQFRIGYALWR 438


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,292,395
Number of extensions: 53801
Number of successful extensions: 143
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 143
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 323
Effective length of database: 1,207,925
Effective search space: 390159775
Effective search space used: 390159775
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 132 (55.5 bits)