BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0104.p (521 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310350|ref|YP_003774442.1| sugar ABC transporter ATPase [H... 990 0.0 gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [H... 320 2e-88 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 315 6e-87 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 314 1e-86 gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [H... 297 1e-81 >gi|300310350|ref|YP_003774442.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/492 (100%), Positives = 492/492 (100%) Query: 30 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA 89 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA Sbjct: 29 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA 88 Query: 90 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRAVNL 149 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRAVNL Sbjct: 89 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRAVNL 148 Query: 150 PADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGLR 209 PADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGLR Sbjct: 149 PADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGLR 208 Query: 210 ANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLSQERYR 269 ANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLSQERYR Sbjct: 209 ANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLSQERYR 268 Query: 270 VDAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPARAG 329 VDAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPARAG Sbjct: 269 VDAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPARAG 328 Query: 330 QITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGALD 389 QITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGALD Sbjct: 329 QITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGALD 388 Query: 390 AAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLILHGPTVGVD 449 AAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLILHGPTVGVD Sbjct: 389 AAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLILHGPTVGVD 448 Query: 450 VGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIVRRYAVEGLAESEL 509 VGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIVRRYAVEGLAESEL Sbjct: 449 VGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIVRRYAVEGLAESEL 508 Query: 510 FHDLVSEQSQES 521 FHDLVSEQSQES Sbjct: 509 FHDLVSEQSQES 520 >gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 546 Score = 320 bits (820), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 190/476 (39%), Positives = 279/476 (58%), Gaps = 24/476 (5%) Query: 30 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA 89 GV AL+ V T+ GE+ LLGENG GKSTL+KI+ G P EG I++ G+ V + Sbjct: 47 GVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHLGGREVRFASAQD 106 Query: 90 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRA--- 146 ++ GI V+Q+ + +SVAEN+ + Q + G R+ R ++ ARAL A Sbjct: 107 AMRGGITAVHQETVMFEELSVAENIWIGRQPL--CGTPRRIDWRRMEDE--ARALFARLE 162 Query: 147 VNLPADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVIN 206 V+LP A RV +L +A R + IARA++ A++VIMDEPT +L+ E+ L ++I Sbjct: 163 VDLPVRA-----RVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGELYRIIG 217 Query: 207 GLRANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLSQE 266 LR G AV+F+SHK DE +A+ + V RDG +A G + T+ QL LM G+++ Q Sbjct: 218 QLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGREVGQV 277 Query: 267 RYRVDAQLH---KPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGV 323 R + P++EV+ L F+DVSFA+R GEILG GL+ +GR+E+ AL G+ Sbjct: 278 FSRAASNTEDQTAPVLEVKHLSHPSEFDDVSFAVRPGEILGFYGLVGAGRSEVMHALFGL 337 Query: 324 EPARAGQITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRG 383 P G + ++G+ + L +P AI HG+ YVPEDR +G L I NI +L + G Sbjct: 338 SPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQNITLPVLPGI-G 396 Query: 384 KFGALDAAACQRFSTDTVR----QLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVL 439 F +R D R QL++ + V LSGGNQQ+V++ +WLA PRVL Sbjct: 397 FF----LRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVVLAKWLATQPRVL 452 Query: 440 ILHGPTVGVDVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRI 495 IL PT G+D+GSK ++R I +L +GL VIL+S +LPE++ D +++M +GR+ Sbjct: 453 ILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRIVVMHQGRV 508 Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 17/241 (7%) Query: 277 PLMEVRALGRHG----AFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPARAGQIT 332 P++ + +G+ A +DV F +R GE++ + G +G++ L L G+ G I Sbjct: 34 PVLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIH 93 Query: 333 LEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGALDAAA 392 L G+ + + DA+ GI V ++ + +F + S+ +NI + L G +D Sbjct: 94 LGGREVRFASAQDAMRGGITAVHQETV---MFEELSVAENIWIG-RQPLCGTPRRID--- 146 Query: 393 CQRFSTDTVRQLQIATPDVDRPVQS----LSGGNQQRVLIGRWLAINPRVLILHGPTVGV 448 R D R L A +VD PV++ LS + V I R L+ +V+I+ PT + Sbjct: 147 -WRRMEDEARAL-FARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAAL 204 Query: 449 DVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIVRRYAVEGLAESE 508 +YRII L + G VI IS E+ D +++ GR + + + E + Sbjct: 205 SHHEIGELYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQ 264 Query: 509 L 509 L Sbjct: 265 L 265 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 315 bits (807), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 176/468 (37%), Positives = 282/468 (60%), Gaps = 10/468 (2%) Query: 30 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA 89 GV AL + AGE++ L+GENG GKSTL+KI++G G+I + G+ V P Sbjct: 34 GVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLDGKPVEITEPRQ 93 Query: 90 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLF-DRHALNQTAARALRAVN 148 + +LGI ++Q+L+L+ ++S A+N+ + + G LF D LN+ AA + Sbjct: 94 AQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMG----LFIDEDELNRQAAAIFARMR 149 Query: 149 LPADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGL 208 L D T V EL +A +Q++ IA+A++ +R++IMDEPT +L E+ L ++I L Sbjct: 150 LDMDPS---TPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDL 206 Query: 209 RANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLS-QER 267 +A GV ++++SHK+DE I + V RDG+ +A P+Q+ + + +M G+ L ++R Sbjct: 207 QAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRALDGEQR 266 Query: 268 YRVDAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPAR 327 D + ++EVR L R A DVSF LR+GEILG GL+ +GR E+A A+ G +P Sbjct: 267 IPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLE 326 Query: 328 AGQITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGA 387 AG+I + G +++P DA+ HGIGY+ EDR GL + ++ NI + + + + G Sbjct: 327 AGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFT-RVGF 385 Query: 388 LDAAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLILHGPTVG 447 +D A + + VRQL I TP V++ + LSGGNQQ+++I +WL + +L PT G Sbjct: 386 MDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRG 445 Query: 448 VDVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRI 495 +DVG+K IY+++ LA++G +++IS +LPE+L+ +L+M GRI Sbjct: 446 IDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRI 493 Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 33 ALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLASLS 92 A+R V T+ GEI G G G++ + + I GA P GEI I G + +P +++ Sbjct: 288 AIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVA 347 Query: 93 LGIETVYQD---LSLLPNMSVAENVALSEQLVHHQGRLAR--LFDRHALNQTAARALR-- 145 GI + +D L M V N+ALS GR R D+ A+ + A +R Sbjct: 348 HGIGYLSEDRKHFGLAVGMDVQANIALSSM-----GRFTRVGFMDQRAIREAAQMYVRQL 402 Query: 146 AVNLPADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVI 205 A+ P+ ++ + L +Q I IA+ + ++ DEPT + + K++ Sbjct: 403 AIKTPS----VEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLL 458 Query: 206 NGLRANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQ 262 + L G A++ +S +L E + + +V +G + T+ ++ QL T ++ Sbjct: 459 DALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLATQRE 515 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 314 bits (805), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 188/475 (39%), Positives = 280/475 (58%), Gaps = 28/475 (5%) Query: 33 ALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLASLS 92 AL + LTI GEI+ L+GENG GKSTL+K+++G P +GEI + G+ VA P AS + Sbjct: 21 ALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDPGASRA 80 Query: 93 LGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRAVNLPAD 152 GI +YQ+L++ PN+SVA NV + +L G L D A+ LR + Sbjct: 81 AGINLIYQELAVAPNISVAANVFMGSELRTRLG----LIDHAAMRSRTDAVLRQLGAGFG 136 Query: 153 ADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGLRANG 212 A L R L IA +Q + IARA+ +R+VIMDEPT +L+++E + L V+ LR G Sbjct: 137 ASDLAGR---LSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEG 193 Query: 213 VAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQLSQ--ERYRV 270 +A++++SH++ E +A+ + V RDG V + + ++ Q+M G+ LS+ + R+ Sbjct: 194 LAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLSEFYQHQRI 253 Query: 271 ---DAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPAR 327 DA +M+VRAL G SF +R GE+LG GL+ +GR ELA L G +P Sbjct: 254 APADAAQLPTVMQVRALA-GGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRS 312 Query: 328 AGQITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRK------L 381 G I LEG+P+ + P A+ GI YVPEDR +GLFL ++ N + + + Sbjct: 313 GGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLV 372 Query: 382 RGK-FGALDAAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLI 440 R + G + AA QR + +++A P+ PV LSGGNQQ+VL+ RWL I P+VLI Sbjct: 373 RSRSLGGVARAAIQRLN------VKVAHPET--PVGKLSGGNQQKVLLARWLEIAPKVLI 424 Query: 441 LHGPTVGVDVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRI 495 L PT GVD+ +K IY+++ LA +G+ V++IS +LPE++ CD +L+M+ G I Sbjct: 425 LDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 479 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 10/224 (4%) Query: 277 PLMEVR----ALGRHGAFEDVSFALRQGEILGITGLLDSGRNELALALAGVEPARAGQIT 332 PL+++R + G A D+ +R GEI + G +G++ L L+GV G+I Sbjct: 5 PLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEIL 64 Query: 333 LEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTTILRKLRGKFGALDAAA 392 L+G+P++LR+PG + GI + ++ L + +I + +LR + G +D AA Sbjct: 65 LDGRPVALRDPGASRAAGINLIYQE-----LAVAPNISVAANVFMGSELRTRLGLIDHAA 119 Query: 393 CQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINPRVLILHGPTVGVDVGS 452 + + +RQL D LS QQ+V I R L R++I+ PT + Sbjct: 120 MRSRTDAVLRQLGAGFGASDL-AGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERE 178 Query: 453 KDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIV 496 + ++ +++ L GL +I IS + E+ D + +++ G V Sbjct: 179 TEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFV 222 >gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 516 Score = 297 bits (761), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 175/502 (34%), Positives = 284/502 (56%), Gaps = 22/502 (4%) Query: 30 GVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPPSEGEIYIQGQRVAELTPLA 89 GV AL V L + GE++ L+G+NG GKSTLIK++ G P G+I + G+ +A + L Sbjct: 24 GVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIELDGRAIAPASTLE 83 Query: 90 SLSLGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLFDRHALNQTAARALRAVNL 149 + +LGI TVYQ+++L PN+SVAEN+ + + R R+ D +++ + + L+ + + Sbjct: 84 AQALGISTVYQEVNLCPNLSVAENIFVG----RYPTRFGRI-DWKSVHTQSRQLLQQLQI 138 Query: 150 PADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVINGLR 209 D + + P+A +Q++AI+RA++ SA+++I+DEPT+SL + EV L KV+ LR Sbjct: 139 DID---VAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLR 195 Query: 210 ANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTG--------- 260 G+A+LFV+H LD+ + I + V R+G + + + + ++ L M G Sbjct: 196 EQGMAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVGVTAVDHRKV 255 Query: 261 ----KQLSQERYRVDAQLHKPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNEL 316 + L+ E A ++ GR G LR+GE+ G+ GLL SGR E+ Sbjct: 256 EAGAEALASELSTDAAAAGAVFLQAEGFGRRGVLAPQDLQLRRGEVFGLCGLLGSGRTEM 315 Query: 317 ALALAGVEPARAGQITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTT 376 A L G + A GQ+ +EG+ + L P DAI GIG+ EDR EG L+ S+R+NI+ Sbjct: 316 ARLLFGADRADCGQLRIEGKEVRLNVPRDAIAAGIGFCSEDRKKEGAILELSVRENIILA 375 Query: 377 ILRKLRGKFGALDAAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINP 436 L+ +G F L + + D V+ L I T D++ P+ LSGGNQQ+ L+ RWLA +P Sbjct: 376 -LQARQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDP 434 Query: 437 RVLILHGPTVGVDVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMKRGRIV 496 +LIL PT G+DV +K I + + ++G+ ++ IS ++PE+L+ D +L+++ R Sbjct: 435 GMLILDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRAC 494 Query: 497 RRYAVEGLAESELFHDLVSEQS 518 Y L E + + E + Sbjct: 495 GEYRRGELDEQSVLQVIAGETA 516 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.137 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,578,552 Number of extensions: 69152 Number of successful extensions: 842 Number of sequences better than 1.0e-08: 127 Number of HSP's gapped: 573 Number of HSP's successfully gapped: 202 Length of query: 521 Length of database: 1,619,870 Length adjustment: 90 Effective length of query: 431 Effective length of database: 1,193,720 Effective search space: 514493320 Effective search space used: 514493320 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)