BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0023.p (1160 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312677|ref|YP_003776769.1| two component hybrid sensor his... 2336 0.0 gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kin... 192 2e-49 gi|300311948|ref|YP_003776040.1| sensor histidine kinase/respons... 191 2e-49 gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729... 173 7e-44 gi|300313029|ref|YP_003777121.1| two component hybrid sensor his... 166 1e-41 >gi|300312677|ref|YP_003776769.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1160 Score = 2336 bits (6054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1157/1160 (99%), Positives = 1158/1160 (99%) Query: 1 MLKRQGKGAFSGPPLPLGPLIGFAVAILAVVLIALFTYEASVSRGQAANAVSHTMKVREQ 60 MLKRQGKGAFSGPPLPLGPLIGFAVAILAVVLIALFTYEASVSRGQAANAVSHTMKVREQ Sbjct: 1 MLKRQGKGAFSGPPLPLGPLIGFAVAILAVVLIALFTYEASVSRGQAANAVSHTMKVREQ 60 Query: 61 LQSLVSTLKDAETSQRGYLLTGTESYLSPYNQARAALPGEIARLRALLADNPDQLQRLSQ 120 LQSLVSTLKDAETSQRGYLLTGTESYLSPYNQARAALPGEIARLRALLADNPDQLQRLSQ Sbjct: 61 LQSLVSTLKDAETSQRGYLLTGTESYLSPYNQARAALPGEIARLRALLADNPDQLQRLSQ 120 Query: 121 IEGITNDKLQELAETIDLRRKGDAAAALAVVQSDRGKMSMDRVRTLAREMEGEERDLLAA 180 IEGITNDKLQELAETIDLRRKGDAAAALAVVQSDRGKMSMDRVRTLAREMEGEERDLLAA Sbjct: 121 IEGITNDKLQELAETIDLRRKGDAAAALAVVQSDRGKMSMDRVRTLAREMEGEERDLLAA 180 Query: 181 RQSDWRDAVSFSTAVAWGGSGLLLVLIVAAAMTTSRDYRQREKQAWIRAGQMGLAERLQG 240 RQSDWRDAVSFSTAVAWGGSGLLLVLIVAAAMTTSRDYRQREKQAWIRAGQMGLAERLQG Sbjct: 181 RQSDWRDAVSFSTAVAWGGSGLLLVLIVAAAMTTSRDYRQREKQAWIRAGQMGLAERLQG 240 Query: 241 EQRLDALGDNTLSFLTAYLNAQVGAIYLRSDGGDFERFASHALDDADGPRTLHSGQGLLG 300 EQRLDALGDNTLSFLTAYLNAQVGAIYLRSDGGDFERFASHALDDADGPRTLHSGQGLLG Sbjct: 241 EQRLDALGDNTLSFLTAYLNAQVGAIYLRSDGGDFERFASHALDDADGPRTLHSGQGLLG 300 Query: 301 QAAKLNRAMHIKDVPEDYLTISSAVGRRQPRELMVVPASADGMVQAVFELGFLRQVRPEE 360 QAAKLNRAMH+KDVPEDYLTISSAVGRRQPRELMVVPASADGMVQAVFELGFLRQVRPEE Sbjct: 301 QAAKLNRAMHVKDVPEDYLTISSAVGRRQPRELMVVPASADGMVQAVFELGFLRQVRPEE 360 Query: 361 EELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALK 420 EELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALK Sbjct: 361 EELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALK 420 Query: 421 ASQLRLETQQAELEETNAQLEEQTQLLELQKDDLAKTQVVLVEKATELERANQYKSEFLA 480 ASQLRLETQQAELEETNAQLEEQTQLLELQKDDLAKTQVVLVEKATELERANQYKSEFLA Sbjct: 421 ASQLRLETQQAELEETNAQLEEQTQLLELQKDDLAKTQVVLVEKATELERANQYKSEFLA 480 Query: 481 NMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKME 540 NMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKME Sbjct: 481 NMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKME 540 Query: 541 AGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKN 600 AGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKN Sbjct: 541 AGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKN 600 Query: 601 LLSNAIKFTEKGEVSLRIYPDAGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKY 660 LLSNAIKFTEKGEVSLRIYPDAGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKY Sbjct: 601 LLSNAIKFTEKGEVSLRIYPDAGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKY 660 Query: 661 GGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPELTPAAAA 720 GGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPE TPAAAA Sbjct: 661 GGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPEPTPAAAA 720 Query: 721 AASTLQAAHVATAPDVRINRTPAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAM 780 AASTLQAAHVATAPDVRINRTPAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAM Sbjct: 721 AASTLQAAHVATAPDVRINRTPAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAM 780 Query: 781 ILRDLAREMGFQCVVTHSANEGVAAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRH 840 ILRDLAREMGFQCVVTHSANEGVAAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRH Sbjct: 781 ILRDLAREMGFQCVVTHSANEGVAAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRH 840 Query: 841 IPVHVVSVADYSHEAMERGAIGYALKPVQREELIGAIRKLEAKFLQGLRHVLVVEDDARQ 900 IPVHVVSVADYSHEAMERGAIGYALKPVQREELIGAIRKLEAKFLQGLRHVLVVEDDARQ Sbjct: 841 IPVHVVSVADYSHEAMERGAIGYALKPVQREELIGAIRKLEAKFLQGLRHVLVVEDDARQ 900 Query: 901 LDSIRQLLAGENINLVGVRTATDALARLRQNTFDCMVMDLNLPDLSGYQLLEKMAEQEHV 960 LDSIRQLLAGENINLVGVRTA DALARLRQNTFDCMVMDLNLPDLSGYQLLEKMAEQEHV Sbjct: 901 LDSIRQLLAGENINLVGVRTAADALARLRQNTFDCMVMDLNLPDLSGYQLLEKMAEQEHV 960 Query: 961 AFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPAESQR 1020 AFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPAESQR Sbjct: 961 AFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPAESQR 1020 Query: 1021 MLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDK 1080 MLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDK Sbjct: 1021 MLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDK 1080 Query: 1081 PDAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDY 1140 PDAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDY Sbjct: 1081 PDAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDY 1140 Query: 1141 IAKPLDVEKLLSLVRVWMPK 1160 IAKPLDVEKLLSLVRVWMPK Sbjct: 1141 IAKPLDVEKLLSLVRVWMPK 1160 >gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] Length = 723 Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 161/576 (27%), Positives = 267/576 (46%), Gaps = 105/576 (18%) Query: 446 LLELQKDDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQ 505 LL L +++ A+T LV+ + A + FL+ MSHE+RTP+N+ L +A LL + Sbjct: 59 LLRLLREN-ARTAEKLVQAKEAADHAMLTRGAFLSTMSHEIRTPMNAVLGMAGLLRSTR- 116 Query: 506 GNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVPESFPLTKLADELSASFA 565 L +Q FA+ I + + LL ++ND+LD SK++ GK+DI F L K+ + + + + Sbjct: 117 --LDTQQAEFAKAIEDSAHALLGIVNDVLDFSKIDVGKMDIAVVEFDLAKVVEASAEALS 174 Query: 566 ITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKNLLSNAIKFTEKGEVSLRI----YPD 621 A++K + ++ +P R+ D R+ QIL NLL NA+KFT GEV LR+ Sbjct: 175 FKAREKRVRLLAHLDSRLPPRLVGDPGRIRQILLNLLGNALKFTHAGEVLLRVQALQVTS 234 Query: 622 AGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDI 681 R+ F VRD+GIG+ ED + +F F QAD S R+YGGTGLGLSI + L L+GG I Sbjct: 235 DHCRVRFEVRDSGIGMDEDTLRRLFSPFAQADSSVTRQYGGTGLGLSICKRLVELMGGSI 294 Query: 682 RVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPELTPAAAAAASTLQAAHVATAPDVRINRT 741 V S LG GS F L V T P + + Sbjct: 295 GVESALGTGSCFWFEL-----------------------------GIPVTTGPGMIRSEP 325 Query: 742 PAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAMILRDLAREMGFQCVVTHSANE 801 PAA P+R I ++E A A +L + R + + SA++ Sbjct: 326 PAADRPRR-------------------IALVEPHDASAAMLHEYLRSAALETLRFGSASD 366 Query: 802 GVAA-----AEMYRPSAILMDMNLPDFSGLGVLDQIK-RNPKTRHIPV-HVVSVADYS-- 852 +AA A A+++ + D + V+ +++ P R + + H V D Sbjct: 367 ALAALTGPGASASGIDAVIVSTQVQDLDAVSVMARLQAERPALRRVLLDHGVHGLDTGSK 426 Query: 853 --HEAMERGAIGYALKPVQREELIGAIRKLEA-------------------KFLQGLRHV 891 HE ++ P+++++L+ A+ ++ + G R + Sbjct: 427 PHHEVLQ--------LPLRKQQLLRALGVTDSAAEAQTSPHARMAAPATPRQGHSGQRDI 478 Query: 892 LVVEDDARQLDSIRQLLAGENINLVG-----VRTATDALARLRQNTFDCMVMDLNLPDLS 946 L+VED+ + Q +A +N +G +AL RL ++ + ++MD +P L Sbjct: 479 LLVEDNV-----MNQKVAVYQLNAMGYAADIAANGLEALERLARHRYALVLMDCQMPLLD 533 Query: 947 GYQLLEKMAE-QEHVAFPPVIVYTGRSLSAEEEQNL 981 GY+ ++ Q +A ++ T +++ + E+ L Sbjct: 534 GYETTRRIRRMQGELAHTTIVAMTANAMAGDRERCL 569 Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 67/127 (52%), Gaps = 7/127 (5%) Query: 1020 RMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQD 1079 RM A R+ R IL+VED+V N L G +IA NG EAL+ L R + Sbjct: 461 RMAAPATPRQGHSGQRDILLVEDNVMNQKVAVYQLNAMGYAADIAANGLEALERLARHR- 519 Query: 1080 KPDAPIDLVLMDIMMPEMDGLTAMREIRK-QAVWKRLPIIALTAKAMKDDQEKCLAAGAN 1138 LVLMD MP +DG R IR+ Q I+A+TA AM D+E+CL AG + Sbjct: 520 -----YALVLMDCQMPLLDGYETTRRIRRMQGELAHTTIVAMTANAMAGDRERCLEAGMD 574 Query: 1139 DYIAKPL 1145 DY+ KPL Sbjct: 575 DYLTKPL 581 >gi|300311948|ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 191 bits (486), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 150/447 (33%), Positives = 225/447 (50%), Gaps = 61/447 (13%) Query: 441 EEQTQLLELQKDDLAKTQVVLVEKATEL-ERANQYKSEFLANMSHELRTPLNSTLILAKL 499 E QT LL LQ+ + K +++A E E AN KS F+A MSHELRTPLNS L A++ Sbjct: 654 ERQTNLL-LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI 712 Query: 500 LADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVPESFPLTKLADE 559 L + + + I +G LL+LI+ +LD++K+EAGK+ + + L ++ Sbjct: 713 L--HVDATIPPARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQ 770 Query: 560 LSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKNLLSNAIKFTEKGEVSLRIY 619 + FA A+QKGL F+ + +PQ + D +RL QIL NLL NA+KFT+ G V+LR+ Sbjct: 771 IVGMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRL- 829 Query: 620 PDAGGRIA-FAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLG 678 IA F V DTGIGI +D + IF F ++ + R+ GTGLGL+ISR L H++G Sbjct: 830 -RYAREIAYFDVIDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMG 888 Query: 679 GDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPELTPAAAAAASTLQAAHVATAPDVRI 738 G++ V S++G+GS F L + P+V + Sbjct: 889 GELSVQSQVGQGSSFHLKI----------------------------------YLPEVHV 914 Query: 739 NRTPAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAMILRDLAREMGFQCVVTHS 798 R I ++D SR ILV++D A+ +L+D+ +GF Sbjct: 915 PRP----------RIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGF---TVSE 961 Query: 799 ANEGVAAAEMY---RPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYS--H 853 A+ G+A E P +L+D+ +P G V I R +P+ +VS + H Sbjct: 962 ADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAI-RARGLAQLPILLVSANAFENLH 1020 Query: 854 EAMERGAIG-YALKPVQREELIGAIRK 879 E E + + +KPV EL+G IR+ Sbjct: 1021 ERNEPPLVNDFVVKPVSYHELLGKIRQ 1047 Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 7/121 (5%) Query: 1035 RRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDKPDAPIDLVLMDIMM 1094 R ILVV+D L +L P G V A +G ++ L + DLVL+DI M Sbjct: 933 RHILVVDDQASQRRLLKDMLMPLGFTVSEADSGLACMETLGHALP------DLVLLDIAM 986 Query: 1095 PEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSLV 1154 P+MDG + R IR + + +LPI+ ++A A ++ E+ ND++ KP+ +LL + Sbjct: 987 PQMDGWSVARAIRARGL-AQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKI 1045 Query: 1155 R 1155 R Sbjct: 1046 R 1046 >gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] Length = 765 Score = 173 bits (438), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 147/239 (61%), Gaps = 13/239 (5%) Query: 467 ELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDL 526 E + AN+ KS FLA +SHE+RTP+N L L++LL ++ LS +Q +A +I A L Sbjct: 340 EADHANEAKSHFLAMVSHEIRTPMNGILGLSELLMES---GLSSKQRDYADSIHGATGGL 396 Query: 527 LALINDILDLSKMEAGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQR 586 + +INDILD SK+E+GKLD+ +F +L ELS + + Q+K + F + ++ P+ Sbjct: 397 VRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLHLD--CPEN 454 Query: 587 MET--DIQRLGQILKNLLSNAIKFTEKGEVSLRIYP--DAGG----RIAFAVRDTGIGIG 638 + D RL Q+L NLLSNAIKFT+ G V L + D G R+ FA+ DTGIGI Sbjct: 455 LSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDESGPSRWRLFFAITDTGIGIS 514 Query: 639 EDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSL 697 + Q +F F QAD S R++GGTGLGL+IS++L L+GG I S GE + F+ + Sbjct: 515 PEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGGTIACQSIPGESTRFSFEI 573 Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Query: 1030 TVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDKPDAPIDLVL 1089 ++ G RIL+ ED N L +L KG ++ NG +A++A++ DLVL Sbjct: 637 SLLAGARILMAEDTEINRQLLRILLARKGCILQEVENGLQAVEAIRTGH------YDLVL 690 Query: 1090 MDIMMPEMDGLTAMREIRKQAVWK---RLPIIALTAKAMKDDQEKCLAAGANDYIAKPLD 1146 MD MMP MDG A EIR + R PIIALTA A++ D+++CL AG +DY++KP Sbjct: 691 MDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFT 750 Query: 1147 VEKLLSLVRVWMPK 1160 L+ V W+ K Sbjct: 751 QVGLMQTVEKWLQK 764 >gi|300313029|ref|YP_003777121.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1524 Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 142/431 (32%), Positives = 215/431 (49%), Gaps = 46/431 (10%) Query: 461 LVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTIS 520 LV+ + E+AN KS FLA++SHE+RTP+N L + +LL + L +Q + Sbjct: 883 LVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLL--QRTQPLPAQQDYLDKAEI 940 Query: 521 SAGNDLLALINDILDLSKMEAGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVE 580 SA LL L+ND+LD SKM+A +L + ++F L + L+A A + Q G+ + ++ Sbjct: 941 SA-KSLLNLLNDLLDFSKMDAKQLQLDLQAFELERFGHNLAAVLAGSPPQAGVSLHIALD 999 Query: 581 PGVPQRMETDIQRLGQILKNLLSNAIKFTEKGEVSL---RIYPDAGGRIAF--AVRDTGI 635 P +P+R+ D RL Q+L NL NA+KFT +G + + R+ P G +A V DTGI Sbjct: 1000 PQLPRRLVGDAHRLQQVLVNLTGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGI 1059 Query: 636 GIGEDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTL 695 GI D+ IF+AF QA+ ST R+YGGTGLGL+IS+ L L+GG ++V+S G GS F Sbjct: 1060 GIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWF 1119 Query: 696 SLPPLYSSEQAVSNTA------PELTPAAAAAASTLQAAHVATAPDVRINRTPAAAAPQR 749 L + + A P+ AA+ A + +APD Q Sbjct: 1120 DLQLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPETARSAPDA-----------QC 1168 Query: 750 LQEISIDDDRDRIETSSRLILVIEDDAAFAMILRDLAREMGFQCVVTHSANEGVAAA--E 807 LQ + IL++ED+ + +L G Q S + GVA A Sbjct: 1169 LQGVQ--------------ILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDP 1214 Query: 808 MYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYSHE----AMERGAIGY 863 +LMD+ +P G+ +I+ + R +P+ + A+ S E +E G G+ Sbjct: 1215 ARHFDLVLMDLQMPGMDGIEATRRIRGQYELRGLPI-LAMTANASPEDKQRCIEAGMAGH 1273 Query: 864 ALKPVQREELI 874 KP+ LI Sbjct: 1274 IAKPIDIATLI 1284 Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%) Query: 1031 VFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDKPDAPIDLVLM 1090 +G +IL+VED+ N S +L G +V A +G + P DLVLM Sbjct: 1168 CLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMAC----DPARHFDLVLM 1223 Query: 1091 DIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKL 1150 D+ MP MDG+ A R IR Q + LPI+A+TA A +D+++C+ AG +IAKP+D+ L Sbjct: 1224 DLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDIATL 1283 Query: 1151 LSLV 1154 + ++ Sbjct: 1284 IPVL 1287 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.317 0.132 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,018,245 Number of extensions: 123082 Number of successful extensions: 954 Number of sequences better than 1.0e-08: 70 Number of HSP's gapped: 875 Number of HSP's successfully gapped: 76 Length of query: 1160 Length of database: 1,619,870 Length adjustment: 96 Effective length of query: 1064 Effective length of database: 1,165,310 Effective search space: 1239889840 Effective search space used: 1239889840 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)