BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0129.p (861 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subu... 1724 0.0 gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [... 506 e-144 gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [H... 497 e-141 gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-bind... 308 1e-84 >gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae SmR1] Length = 861 Score = 1724 bits (4466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/861 (100%), Positives = 861/861 (100%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS Sbjct: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK Sbjct: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG Sbjct: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 KFGPKDVVRVDVDHGQLSFSK Sbjct: 841 KFGPKDVVRVDVDHGQLSFSK 861 >gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [Herbaspirillum seropedicae SmR1] Length = 893 Score = 506 bits (1304), Expect = e-144, Method: Compositional matrix adjust. Identities = 305/727 (41%), Positives = 441/727 (60%), Gaps = 35/727 (4%) Query: 144 RGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 203 +GG V + G+ AL +YT +LT+RAR GK+DPV+GRD EIR+A+ +L RR +NNP+ Sbjct: 179 QGGDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPI 238 Query: 204 LIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVL 263 L GE GVGKTA+VEGLA RI +VP +L+ + +LDM L AGA +GEFE RLK V+ Sbjct: 239 LTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVI 298 Query: 264 KEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 E+ + I+FIDE HTM+GAG G DA N+LKPALARGEL + ATT EY++Y Sbjct: 299 DEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF 358 Query: 324 EKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITD 383 EKDAAL RRFQ I V+EP+ E A+LR + E H GV + D AI A LSHRYI+ Sbjct: 359 EKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISG 418 Query: 384 RFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQL 443 R LPDKAI ++D A +K+ + ++ P ++ + RRL +L E A++RE + +L Sbjct: 419 RQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRL 478 Query: 444 IEEEIEKLE--REYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSEL 501 E + + + E +L++ W+ E+ +L I+ R +EEA ++S + S Sbjct: 479 GELQAQHAQAIAEQTELQQRWEQER-------ELNGRIQAARAALEEANQESASSQDSAA 531 Query: 502 KYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGER 561 +L +L A L K+ G E P +V QV +AEIVA TGIP+ +M++ E Sbjct: 532 ARSELQQLLAQL-----KEHQG---ETP-MVPVQVDGHVVAEIVAGWTGIPLGKMVKDEI 582 Query: 562 EKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCK 621 + +L ++ +L ERV+GQ +A AV+ +R SRA L DP KP G F+F+GP+GVGKTE Sbjct: 583 KTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETAL 642 Query: 622 ALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILL 681 ALA L+ E +I I+MSE+ E H+V+ L G+PPGYVGY EGG LTEAVRR PYSV+LL Sbjct: 643 ALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLL 702 Query: 682 DEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKI-------QSME 734 DE+EKAHPDV + QV D G M DG+GR +DFKNT+I++TSN+ S ++ + E Sbjct: 703 DEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAE 762 Query: 735 DSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQL-----RILEQR 789 P + + + ++ F+P F+ R+ +++ ++ + + + I K++L RI E Sbjct: 763 LPTPDELDVLIRPQLVKAFKPAFLGRL-KVIPYYPISDEVLEQIIKLKLGRIANRIAENH 821 Query: 790 LAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAGKFGPKDVVR 849 A+ + EA L + E GAR + + + +++ +LA + + R Sbjct: 822 KAEFSYDKALVEAVLARCTEVD----SGARNVDNILNGSLLPEIAESVLARMAEGQGISR 877 Query: 850 VDVDHGQ 856 + V G+ Sbjct: 878 IKVSAGK 884 >gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum seropedicae SmR1] Length = 889 Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust. Identities = 334/837 (39%), Positives = 477/837 (56%), Gaps = 69/837 (8%) Query: 1 MRLDKLTTKLQE----ALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVN 56 + L L KL E A A + V + ++ HL LALL Q + +R+G++ Sbjct: 3 INLRSLICKLNETARLATERAATLCVSCSHYEVDLEHLFLALLEQPQSDFSLIARRSGID 62 Query: 57 VNGLSAALQAAVKRLPQVSGNGGEVQVGRELVALL-NLADKEAQKHGDQFVASEMVLLGL 115 +GL A L+ + + GN + L L N + + + V S +LL L Sbjct: 63 TDGLQADLEHEISTFRE--GNARTPVLSPHLRTLFENGWLIASLEESNPSVRSAHLLLAL 120 Query: 116 VDDKSDAGRAARENG-----------------LTRKSLEAAITAVRG-GASVSSQQDE-- 155 + +SD + A LT S+E+A G G S D Sbjct: 121 LT-QSDLSQLAYRGSKLFAKFKIDEIKHNLHRLTEGSVESAAIGKTGQGGDRESGGDPMG 179 Query: 156 -------GQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 208 G+ AL +YT LT+RAR GK+DPVIGRD EIR+A+ +L RR +NNP+L GE Sbjct: 180 ELKQLRIGKMTALDQYTTQLTQRARDGKIDPVIGRDAEIRQAVDILLRRRQNNPILTGEA 239 Query: 209 GVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQ 268 GVGKTA+VEGLA RI G+VP L+ + +LDM L AGA +GEFE RLK V+ E+ + Sbjct: 240 GVGKTAVVEGLALRIAQGDVPKPLQGVEIHTLDMGLLQAGASVKGEFESRLKTVIDEVKK 299 Query: 269 DEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 I+FIDE HTM+GA G DA N+LKPALARGEL + ATT EY++Y EKDAA Sbjct: 300 SAYPIILFIDEAHTMIGAAGQAGQSDAANLLKPALARGELRTIAATTWSEYKKYFEKDAA 359 Query: 329 LERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPD 388 L RRFQ I V+EP + A+LR + E H GV + D A+V A LSHRYI+ R LPD Sbjct: 360 LARRFQVIKVEEPGEDVACAMLRAMVPLMEQHFGVRVYDEAVVEAVRLSHRYISGRQLPD 419 Query: 389 KAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQ--KRL-QLIE 445 KAI ++D A +K+ + D+ P +++ + RRL +L E A++RE SQ +RL L++ Sbjct: 420 KAISVLDTACAKVALGRDATPALLEGVTRRLERLDTEISALRREAASGSQHEERLASLLD 479 Query: 446 EEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEE-ATRKSDWQKVSELKYG 504 + + + E DL+ W+ E+ +L E I++ R +E T + V + Sbjct: 480 QHVCAVA-ERHDLQLRWEQER-------ELNERIQQARATLENPGTGDARGGNVDAAR-- 529 Query: 505 KLAELEAALE--VQNKKDAAGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGERE 562 AEL+ L+ Q + DA +V QV +AEIVA TGIP+ +M++ E + Sbjct: 530 --AELKQLLDELRQRQGDA--------PMVPIQVDGHVVAEIVAAWTGIPLGKMVKDEIQ 579 Query: 563 KLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKA 622 +L ++ +L ERV+GQ +A AV+ +R SRA L DP KP G F+F+GP+GVGKTE A Sbjct: 580 TVLDLDALLQERVLGQPQATSAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALA 639 Query: 623 LASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 682 LA L+ E +I I+MSE+ E H+V+ L G+PPGYVGY EGG LTEAVRR PYSV+LLD Sbjct: 640 LADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLD 699 Query: 683 EIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKI------QSMED- 735 E+EKAH DV + QV D G M D +GR +DFKNT+I++TSN+ S ++ +S E+ Sbjct: 700 EVEKAHADVLELFFQVFDKGVMDDAEGREIDFKNTIIILTSNVASAQMMQACLNKSQEEL 759 Query: 736 SDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAK 792 P + + ++ F+P F+ R+ ++V ++ + + I K++L + +R+A+ Sbjct: 760 PTPEELDTLIRPQLIKTFKPAFLGRL-KVVPYYPIADVVLVEIIKLKLARIAKRVAE 815 >gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-binding specificity subunit [Herbaspirillum seropedicae SmR1] Length = 767 Score = 308 bits (789), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 182/401 (45%), Positives = 252/401 (62%), Gaps = 21/401 (5%) Query: 26 NQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGLSAALQAAVK-RLPQVSGNG---GEV 81 +++I HL+LALL+ + A +L+ VN++ L L + P V G + Sbjct: 22 HEFITVEHLLLALLD--NPSAAEVLRACSVNIDDLRKTLTNFITDNTPTVPGTNEVDTQP 79 Query: 82 QVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDK-SDAGRAARENGLTRKSLEAAI 140 +G + V + ++ +G + V VL+ + +K S A + G+TR + I Sbjct: 80 TLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSHAVYYLHQQGVTRLDVVNFI 139 Query: 141 T-AVRGGASVSSQ---------QDEGQRE--ALKKYTLDLTERARAGKLDPVIGRDDEIR 188 + VR Q Q EGQ++ L ++T +L + A GK+DP+IGR+ E+ Sbjct: 140 SHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLNKAAAEGKIDPLIGRESEVE 199 Query: 189 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAG 248 R IQ L RR KNNP+L+GE GVGKTAI EGLA R+ G+VP+ LK+ V SLDM ALLAG Sbjct: 200 RVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVPEILKNAVVYSLDMGALLAG 259 Query: 249 AKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEG-AMDAGNMLKPALARGE 307 KYRG+FE+RLKAVLK++ +D I+FIDE+HT++GAG A G +DA N+LKPAL+ G+ Sbjct: 260 TKYRGDFEQRLKAVLKQL-KDSPNGILFIDEIHTIIGAGSASGGTLDASNLLKPALSSGQ 318 Query: 308 LHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITD 367 L C+GATT E+R EKD AL RRFQKI V+EP+VE T+ ILRGL+ K+E HHGV + Sbjct: 319 LKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQILRGLKSKFEEHHGVKYSA 378 Query: 368 PAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSK 408 A+ +AAEL+ R+I DR LPDKAID+IDEA + +I SK Sbjct: 379 SALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 419 Score = 278 bits (712), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 155/350 (44%), Positives = 222/350 (63%), Gaps = 19/350 (5%) Query: 512 ALEVQNKKDAAGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVL 571 A++V ++ AA K K +T +G EI EI+++ IP + Q +R KL ++ L Sbjct: 401 AIDVIDEAGAAQRILPKSKQKKT-IGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDL 459 Query: 572 HERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTE 631 V GQD AI A+S AI+ +RAGLG KP GSF+F GPTGVGKTE+ K LA ++ E Sbjct: 460 KNVVFGQDPAIEALSSAIKMARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLA-FILGIE 518 Query: 632 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDV 691 ++R DMSE+ME+H+V+RLIGAPPGYVG+++GG LTEAV +KP++V+LLDEIEKAHPD+ Sbjct: 519 --LVRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDI 576 Query: 692 FNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQ--------SMEDSDPALVKL 743 FN+LLQV+D G +TD GR DF+N +I+MT+N G+ +Q E D Sbjct: 577 FNILLQVMDHGTLTDNNGRKTDFRNVIIIMTTNAGAESLQKRTIGFTEKKEAGDE----- 631 Query: 744 AVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAG 803 MA+++ F PEF NR+D I+ F LD + I + L LE++L + ++ S++ Sbjct: 632 --MADIKRMFTPEFRNRLDAIISFRPLDEEIILRVVDKFLMQLEEQLHEKKVEAVFSDSL 689 Query: 804 LQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAGKFGPKDVVRVDVD 853 + + + GFDP+ GARP+ R IQ I L+ ++L GK V V++D Sbjct: 690 RKFLGKKGFDPLMGARPMSRLIQDLIRKALADELLFGKLVSGGRVTVEMD 739 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.133 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,436,165 Number of extensions: 101734 Number of successful extensions: 391 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 380 Number of HSP's successfully gapped: 5 Length of query: 861 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 768 Effective length of database: 1,179,515 Effective search space: 905867520 Effective search space used: 905867520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 135 (56.6 bits)