BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0093.p
         (554 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible ...  1141   0.0  
gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible ...   107   3e-24

>gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 566

 Score = 1141 bits (2951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/554 (100%), Positives = 554/554 (100%)

Query: 1   MLSPEDYPKADRSKPVKPNITLVETTPAPAVASPVAAVAPAVEAKAAAPRARITGKTTTV 60
           MLSPEDYPKADRSKPVKPNITLVETTPAPAVASPVAAVAPAVEAKAAAPRARITGKTTTV
Sbjct: 13  MLSPEDYPKADRSKPVKPNITLVETTPAPAVASPVAAVAPAVEAKAAAPRARITGKTTTV 72

Query: 61  AEKPKTAPKSAEIRPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMVT 120
           AEKPKTAPKSAEIRPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMVT
Sbjct: 73  AEKPKTAPKSAEIRPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMVT 132

Query: 121 LEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPLAKLGNKDAKGRLYFQTK 180
           LEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPLAKLGNKDAKGRLYFQTK
Sbjct: 133 LEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPLAKLGNKDAKGRLYFQTK 192

Query: 181 LQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYFN 240
           LQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYFN
Sbjct: 193 LQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYFN 252

Query: 241 DHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHGSSYTYYRVTGPYVPSLLVNQFV 300
           DHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHGSSYTYYRVTGPYVPSLLVNQFV
Sbjct: 253 DHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHGSSYTYYRVTGPYVPSLLVNQFV 312

Query: 301 FIEPKNGEPAFYGQVTQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPEC 360
           FIEPKNGEPAFYGQVTQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPEC
Sbjct: 313 FIEPKNGEPAFYGQVTQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPEC 372

Query: 361 DFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMGP 420
           DFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMGP
Sbjct: 373 DFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMGP 432

Query: 421 WMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQN 480
           WMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQN
Sbjct: 433 WMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQN 492

Query: 481 LTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLAR 540
           LTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLAR
Sbjct: 493 LTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLAR 552

Query: 541 GERSRLADHASDVL 554
           GERSRLADHASDVL
Sbjct: 553 GERSRLADHASDVL 566


>gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 13/176 (7%)

Query: 335 KNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEI 394
           K     +  R   Q+  LN ++  E D    +G AGTGKT LA+A  +   LE      I
Sbjct: 132 KTRKHDLRGRTPHQSQYLNAIL--EHDITFGVGPAGTGKTYLAVACAV-DALERDAVQRI 188

Query: 395 IVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSR 454
           ++TR  V  GE +GFLPG   +K+ P++    D L  L          G   TQ L   +
Sbjct: 189 VLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDL---------LGFDRTQKLFEKQ 239

Query: 455 -IKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQID 509
            I+I  L +MRGRT  + F+I+DEAQN TP+QMK  +TR G G+K V  G++ Q+D
Sbjct: 240 AIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVD 295


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.316    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,634,155
Number of extensions: 67612
Number of successful extensions: 252
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 2
Length of query: 554
Length of database: 1,619,870
Length adjustment: 90
Effective length of query: 464
Effective length of database: 1,193,720
Effective search space: 553886080
Effective search space used: 553886080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 133 (55.8 bits)