BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0030.p (715 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore rece... 1439 0.0 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 638 0.0 gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore... 221 1e-58 gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 215 1e-56 gi|300310762|ref|YP_003774854.1| outer membrane ferric sideropho... 201 2e-52 >gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 715 Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/715 (99%), Positives = 711/715 (99%) Query: 1 MMMSRGFPAPSAAGWLLAGLFAVTPLAWADTAAAAATTNAQEGGTAAALPEISVSAGREK 60 MMMSRGFPAPSAAGWLLAGLFAVTPLAWADTAAA ATTNAQEGGTAAALPEISVSAGREK Sbjct: 1 MMMSRGFPAPSAAGWLLAGLFAVTPLAWADTAAATATTNAQEGGTAAALPEISVSAGREK 60 Query: 61 NSYIAPSTSGATRTDTPLLELPQSVRVMTTQQIDDLGALRLADTVDYVSGISRLNDFGGT 120 NSY APSTSGATRTDTPLLELPQSVRVMTTQQIDDLGA+RLADTVDYVSGISRLNDFGGT Sbjct: 61 NSYNAPSTSGATRTDTPLLELPQSVRVMTTQQIDDLGAVRLADTVDYVSGISRLNDFGGT 120 Query: 121 WDNFAIRGFSSTDMGFLVNGFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTIN 180 WDNFAIRGFSSTDMGFLVNGFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTIN Sbjct: 121 WDNFAIRGFSSTDMGFLVNGFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTIN 180 Query: 181 IVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRR 240 IVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRR Sbjct: 181 IVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRR 240 Query: 241 SLVAPSLAWVIDKNTLLNYEGEFLQASTPLDRGIINVRGVLGGLPRDRVLSEPSDGKMAM 300 SLVAPSLAWVIDKNTLLNYEGEFLQASTPLDRGIINVRGVLGGLPRDRVLSEPSDG MAM Sbjct: 241 SLVAPSLAWVIDKNTLLNYEGEFLQASTPLDRGIINVRGVLGGLPRDRVLSEPSDGNMAM 300 Query: 301 RSNTHQLTLEHSLSEQWRMRLGASYKESSFDGYYTEAKLRNPLQADLRTLDRTGTWRQLP 360 RSNTHQLTLEHSLSEQWRMRLGASYKESSFDGYYTEAKLRNPLQADLRTLDRTGTWRQLP Sbjct: 301 RSNTHQLTLEHSLSEQWRMRLGASYKESSFDGYYTEAKLRNPLQADLRTLDRTGTWRQLP 360 Query: 361 SRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLLPIDIYNPIYGAARPA 420 SRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLLPIDIYNPIYGAARPA Sbjct: 361 SRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLLPIDIYNPIYGAARPA 420 Query: 421 LDDRTSSSDENQRVKALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVTPVGTTSQRQSA 480 LDDRTSSSDENQRVKALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRV PVGTTSQRQSA Sbjct: 421 LDDRTSSSDENQRVKALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVAPVGTTSQRQSA 480 Query: 481 VSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNGRPFDPQRSTSYEAGLKLQSTDERLG 540 VSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNGRPFDPQRSTSYEAGLKLQSTDERLG Sbjct: 481 VSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNGRPFDPQRSTSYEAGLKLQSTDERLG 540 Query: 541 ANFAVYDITKTNVLTTSDNPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARVS 600 ANFAVYDITKTNVLTTSDNPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARVS Sbjct: 541 ANFAVYDITKTNVLTTSDNPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARVS 600 Query: 601 KDRTLPTGTRLANIPAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSLPAY 660 KDRTLPTGTRLANIPAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSLPAY Sbjct: 601 KDRTLPTGTRLANIPAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSLPAY 660 Query: 661 TLVKLLSYWQVSKNVRLSLDVHNLFNRNYYPGSWNNLYVMPGAERTVVARMKIDL 715 TLVKLLSYWQVSKNVRLSLDVHNLFNRNYYPGSWNNLYVMPGAERTVVARMKIDL Sbjct: 661 TLVKLLSYWQVSKNVRLSLDVHNLFNRNYYPGSWNNLYVMPGAERTVVARMKIDL 715 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/701 (49%), Positives = 457/701 (65%), Gaps = 23/701 (3%) Query: 24 TP-LAWADTAAAAATTNAQEGGTAAALPEISVSAGREKNSYIAPSTSGATRTDTPLLELP 82 TP ++WA AA QEG L EI V+ E+ Y STS ATRT+TPL ELP Sbjct: 19 TPSVSWAADAAGK-----QEGD----LGEIVVTGQGERQQYRQSSTSSATRTETPLQELP 69 Query: 83 QSVRVMTTQQIDDLGALRLADTVDYVSGISRLNDFGGTWDNFAIRGFSSTD---MGFLVN 139 QSV+V++ Q IDDL A RL D + YVSG++R N+FGG WDN++IRGFS ++ M L N Sbjct: 70 QSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRGFSGSENGGMNILWN 129 Query: 140 GFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSAG 199 GF +RGY P RD A +E ++FLKGPA+ALYG+SEPGGTIN+VTKKPQF ++N+ ++S G Sbjct: 130 GFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKSANALDLSIG 189 Query: 200 TGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRRSLVAPSLAWVIDKNTLLNY 259 + R+ VDSTG LS +AYRL A E S + + R AP+ W++ +NT+LNY Sbjct: 190 SNDAYRSAVDSTGALSSTVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLLTENTILNY 249 Query: 260 EGEFLQASTPLDRGIINVRGVLGGLPRDRVLSEPSDGKMAMRSNTHQLTLEHSLSEQWRM 319 EGEFL+ PLDRGI+ V G G LP R L EP+DG + M++ H LTLE L+E W + Sbjct: 250 EGEFLRQKAPLDRGIVAVNGNAGVLPVSRFLGEPNDGDIKMQNQNHLLTLEQRLNENWHL 309 Query: 320 RLGASYKESSFDGYYTEAKLRNPLQADLRTLDRTGTWRQLPSRDMSIQGELHGQFKTGDI 379 R G +KE S DGY TEA LQAD TL R +R D S+Q E+ G+F T + Sbjct: 310 RTGIFHKEGSLDGYSTEAF---ALQADNATLRRQRRYRDYSWHDTSLQAEIGGKFATAGV 366 Query: 380 AHTFLVGAEASKLWMNTEILR--STTLLP--IDIYNPIYGAARPALDDRTSSSDENQRVK 435 H LVG E L ++ +LR + + P ++IYNP+YG A+P T +S E Q Sbjct: 367 GHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYNPVYGQAQPTPTANTDTS-ERQIST 425 Query: 436 ALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVTPVGTTSQRQSAVSPRAGISYLPNAWS 495 L++QDQLSLS +W+LL G+R D + +S ++ + T Q + A SPR G++YL Sbjct: 426 GLYLQDQLSLSERWRLLAGVRADAF-RSTLNNLRNGAVTRQDKHAYSPRLGLTYLLTPSW 484 Query: 496 SVYLSAGKSFRGNSGVDVNGRPFDPQRSTSYEAGLKLQSTDERLGANFAVYDITKTNVLT 555 SVY+SA KSFR NSG DV+G F P+ S + EAGLK QS D+R GA AV+DITK NVLT Sbjct: 485 SVYVSASKSFRPNSGSDVSGNAFSPETSRAAEAGLKFQSEDKRSGATLAVFDITKQNVLT 544 Query: 556 TSD-NPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARVSKDRTLPTGTRLANI 614 T NPNF AAGEV+S G E DA +L +WR++ N ++ DA VS+D TLP G+RL NI Sbjct: 545 TDPANPNFSIAAGEVRSKGVELDANARLGHHWRVTGNLAYTDAYVSRDNTLPVGSRLVNI 604 Query: 615 PAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSLPAYTLVKLLSYWQVSKN 674 P SA LL + EDA A+GA YGVGGG+NYVG R+G+ A ++ LP+Y + L+YWQ + Sbjct: 605 PRSSASLLAVFEDADAHGAPYGVGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQFTPK 664 Query: 675 VRLSLDVHNLFNRNYYPGSWNNLYVMPGAERTVVARMKIDL 715 ++LSLDV+NLFN+ YY S+N+L++MPG ER + I Sbjct: 665 MKLSLDVNNLFNKRYYSSSYNSLWIMPGDERNATLALNIKF 705 >gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 704 Score = 221 bits (563), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 210/721 (29%), Positives = 325/721 (45%), Gaps = 60/721 (8%) Query: 22 AVTPLAWADTAAAAATTNAQEGGTAAALPEISVSAGREKNSYIAPSTSGATRTDTPLLEL 81 +++PLA A TT ALP I VS R + Y+AP+ T+++ PL ++ Sbjct: 17 SLSPLAILPACAQQDTT---------ALPAIEVSGARANDGYVAPTAVSGTKSEAPLRDV 67 Query: 82 PQSVRVMTTQQIDDLGALRLADTVDYVSGISRLNDFGGTWDNFAIRGFSSTDMGFLVNGF 141 PQ++ V+ Q I D A L D + V G+ L+ G D IRGF++ F V+GF Sbjct: 68 PQTINVVPAQVIRDQNASSLQDVLKNVPGLG-LSTGDGQRDQVFIRGFTAIGDQF-VDGF 125 Query: 142 PGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSAGTG 201 Y RD + +E +E +KGPA+ LYG GG IN VTKKP S+ + + T Sbjct: 126 RDDALY--FRDLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPGVDVSDVSFTANSTA 183 Query: 202 GLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRRSLVAPSLAWVIDKNTLLNYEG 261 G RRA +D L++RL E GDS + R+ +APS+A +T L + Sbjct: 184 G-RRAELDLGRAGEGALSWRLTGAVERGDSFRAQQFIDRTAIAPSVALRFSADTKLLLQM 242 Query: 262 EFLQASTPLDRGIINVRG----VLGGLPRDRVLSEPSDGKMAMRSNTHQLTLEHSLSEQW 317 ++L+ +D GI + RG V G + +D + R + T H ++++ Sbjct: 243 DYLEDRRMMDFGIPSYRGRPVDVDPGTTYGARNARDAD-FVQSRVASTTATFTHRFNDEF 301 Query: 318 RMRLGASYKESSFD------GYYTEAKLRNPLQADLRTLDRTGTWRQLPSRDMSIQGELH 371 R G Y + + G EA L D G + Q EL Sbjct: 302 SFRNGLRYYDYHLNRNNTNGGTVNEATATTTLNHAKLVRDENGWFN---------QSELT 352 Query: 372 GQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLLP-IDIYNPIYGAARPALDDRTSSSDE 430 + + G I H L G E + P + I+NP+ P + + + Sbjct: 353 QKLQLGSIRHEILYGLELGSQSKDASQASGVVNFPGVSIFNPVLPVVDPNRLNPPTLTYG 412 Query: 431 NQRVKALFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVTPV--GTTSQRQ---SAVSPRA 485 A ++QD LSLS QWK L GLR+D+Y Q SR+ + G+T+ Q +AVSPRA Sbjct: 413 TYDTFATYLQDSLSLSEQWKALVGLRYDRYRQQ--SRILNLANGSTADLQRTDTAVSPRA 470 Query: 486 GISYLPNAWSSVYLSAGKSFR--GNS-GVDVNGRPFDPQRSTSYEAGLKLQSTDERLGAN 542 G+ + P+ S YLS +SF+ G S + N P+++ + EAG K + R A Sbjct: 471 GLVWQPSLTQSYYLSWSRSFQPSGESFALATNNADLAPEQTRNTEAGAKYDFWEGRASAT 530 Query: 543 FAVYDITKTNVLTTSDNPNFMAAAGEVKSTGFEADAYGQLNANWRLSANFSWDDARVSKD 602 +V+ + + N+ + N + G+ ++ G E L W+L A ++W +A +++ Sbjct: 531 VSVFRLERDNIKSALPN-GVVIPVGKQRTDGAELSFSADLKQGWKLLAGYAWLNAVITES 589 Query: 603 RTLPTGTRLAN-----IPAYSAGLLVMREDALANGARYGVGGGVNYVGNRSGNAADTYSL 657 + G P +S L + RE G N VG R N +T +L Sbjct: 590 SSFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGG----GANAVGARFANPGNTVTL 645 Query: 658 PAYTLVKLLSYWQVSKNVRLSLDVHNLFNRNYY---PGSWNNLYVMPGAERTVVARMKID 714 P Y V ++ ++ SK + L++ NLFN Y G+ NL MPGA R V ++ Sbjct: 646 PGYVTVDAMAAYRTSK-YEVQLNIGNLFNTGYIISGHGTNPNL-SMPGAPRNVALTLRYH 703 Query: 715 L 715 + Sbjct: 704 M 704 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 215 bits (547), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 183/662 (27%), Positives = 312/662 (47%), Gaps = 35/662 (5%) Query: 49 LPEISVSAGREK-----NSYIAPSTSGATRTDTPLLELPQSVRVMTTQQIDDLGALRLAD 103 LP++ + A E N Y+A T+ AT+TDTP+LE+PQSV V+T ++D G L D Sbjct: 31 LPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLD 90 Query: 104 TVDYVSGISRLNDFGGT----WDNFAIRGFSSTDM-GFLVNGF---PGSRGYNPRRDTAT 155 + Y+ G + ++ G ++ F +RGF + + +NG PG G R +T Sbjct: 91 VLRYMPGAN--SETHGVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFG-QFRTETYG 147 Query: 156 IERIEFLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSAGTGGLRRATVDSTGPLS 215 +ERIE L+GP S +G ++PGG IN V+K P N V G+ ++ D G Sbjct: 148 MERIEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQ 207 Query: 216 Q-NLAYRLIAMTEEGDSRSSLLS-----NRRSLVAPSLAWVIDKNTLLNYEGEFLQASTP 269 +R++ + + +++ + N R +APSL W +T L +++ + Sbjct: 208 DGEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSG 267 Query: 270 LDRGIINVRGVLGGLPRDRVLSEPSDGKMAMRSNTHQLTLEHSLSEQWRMRLGASYKESS 329 R VR G + ++ +P+ + + + EH W R ++++++ Sbjct: 268 SSRWTA-VRP--GNVLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFR--QNFRQAN 322 Query: 330 FDGYYTEAKLRNPLQADLRTLDRTGTWRQLPSRDMSIQGELHGQFKTGDIAHTFLVGAEA 389 Y NP L R T + + +L G+ K G HT L G + Sbjct: 323 LKSVYAAL---NPGTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFGLDW 379 Query: 390 SKLWMNTEILRSTTLLPIDIYNPIYGAARPALDDRTSSSDENQRVKALFVQDQLSLSPQW 449 S+++ + E+ ++I NP+YG PA + +EN L+ QDQ+ + Sbjct: 380 SRMY-DREVRYRGAAPSLNIDNPVYGVTIPAATTLFGNLEENMNQTGLYAQDQIKFDQRL 438 Query: 450 KLLGGLRWDQYNQSVVSRVTPVGTTSQRQSAVSPRAGISYLPNAWSSVYLSAGKSFRGNS 509 L G RWD+ + TT SA+S R G+SYL + Y+S SF + Sbjct: 439 TLTLGGRWDKVKDETRNYFNRT-TTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFLPQT 497 Query: 510 GVDVNGRPFDPQRSTSYEAGLKLQSTDERLGANFAVYDITKTNVLTTSD-NPNFMAAAGE 568 G D NG+PFDP ++ E G+K Q D + A++++TKTNV T + NF +GE Sbjct: 498 GSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVLSGE 557 Query: 569 VKSTGFEADAYGQLNANWRLSANFSWDDARVSKDRTLP-TGTRLANIPAYSAGLLVMRED 627 +KS G E +A G++ LSA++++ D + +++ T G + +P +A + Sbjct: 558 IKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQPILVPRQAASVWADYTV 617 Query: 628 ALANGARYGVGGGVNYVGNRSGNAADTYSLPAYTLVKLLSYWQVSKNVRLSLDVHNLFNR 687 A G+GGG Y G+ +AA+T T+ + ++ +++ R +L++ N+ N+ Sbjct: 618 QGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLNR-WRYALNISNITNK 676 Query: 688 NY 689 Y Sbjct: 677 EY 678 >gi|300310762|ref|YP_003774854.1| outer membrane ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 717 Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 214/745 (28%), Positives = 315/745 (42%), Gaps = 85/745 (11%) Query: 8 PAPSAAGWLLAGLFAVTPLAWADTAAAAATTNAQEGGTAAALPEISVSAGREKNSYIAPS 67 P P A L + LA AA N E ++LP + V R A Sbjct: 7 PIPCACVRRLPATLCLAFLALPAYAAERDGGNEGEPSGESSLPVVEVRDQRRSPDPRARR 66 Query: 68 TSGATRTDTPLLELPQSVRVMTTQQIDDLGALRLADTVDYVSGISRLNDFGGTWDNFAIR 127 ATR+ +E+PQS++ ++ +Q+ GA LA + V GIS ++D +D F IR Sbjct: 67 VGTATRSAADPMEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISD--TRFDAFRIR 124 Query: 128 GFSSTDMGFLVNGFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTINIVTKKPQ 187 GFSS + L++G Y R IER+E L+GPAS LYG GG IN ++K+P Sbjct: 125 GFSSAN-DLLLDGMRDDPQYV--RGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPG 181 Query: 188 FSASNSAEVSAGTGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRRSLVAPSL 247 ++ A +S G+ GL A +D PL+ + A R+ E S ++ R AP+L Sbjct: 182 QDVASQATLSLGSAGLLGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPAL 241 Query: 248 AWVIDKNTLLNYEGEFLQASTPLDRGI-------------------INVRGVLGGLPRDR 288 W +++ L + E+ + DRGI G RD Sbjct: 242 KWESGRDSWL-LQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDV 300 Query: 289 VLSEPSDGKMAMRSNTHQLTLEHSLSEQWRMRLGASYKE--SSFDG-YYTEAKLRNPLQA 345 + D M++RS TL +LS+ W +R + + S+FD + T+A PL Sbjct: 301 I----RDIHMSLRS-----TLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSAPL-- 349 Query: 346 DLRTLDRTGTWRQLPSRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLL 405 DL + RT + L R + EL GQ AH L+G E S W E + Sbjct: 350 DLDRVQRTRYQQNLQQRSVQNNLELLGQLG----AHDLLLGVEHS--WQKREPRLWS--- 400 Query: 406 PIDIYNPIYGAARPAL----DDRTSSSDENQRVKA---LFVQDQLSLSPQWKLLGGLRWD 458 + P A P DD T+ N + L+VQD+++L+ WK+L GLRWD Sbjct: 401 ---VAAPAVSAVTPENTRNGDDPTTPFQMNYHKASNLGLYVQDKITLAAHWKMLAGLRWD 457 Query: 459 QYNQSVVSRVTPVGTTSQRQS-AVSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNGRP 517 ++ V SR G S+R + A+SPR G+ + YLS K+F G + P Sbjct: 458 RFE--VDSRNRRNGVRSERTAHALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGITP 515 Query: 518 --------FDPQRSTSYEAGLKLQSTDERLGANFAVYDITKTNV-LTTSDNPNFMAAAGE 568 PQ S EAG+K + D RL A + + N + P F +G Sbjct: 516 DARGNFNDLKPQFSRQVEAGIKSEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGL 575 Query: 569 VKSTGFEADAYGQLNANWRLSANFSWDDARVSKDRTLPTGTRLANIPAYSAGLLVMREDA 628 ++ G E G+L A W + A ++ A++ + G R + + L + Sbjct: 576 ERNRGIELSVEGELAAPWFVRAGWAIQSAKIVQAEPKFVGKRASGVSGRGGSLFLSYAPT 635 Query: 629 LANGARYGVGGGVNYVGNRSGNAADTYSLPAYTLVKLLSYWQVSKNVRL-----SLDVHN 683 L A G+ G R + + LPAYT W RL +L V N Sbjct: 636 LGWFAEL----GLTVEGARYADRDNLLELPAYT------RWDGKMGYRLDEAEFTLAVTN 685 Query: 684 LFNRNYYPGSWNNLYVMPGAERTVV 708 L NR YY + V PGA R ++ Sbjct: 686 LANRRYYESATGLSQVRPGAPRALL 710 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.130 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,131,172 Number of extensions: 85879 Number of successful extensions: 334 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 259 Number of HSP's successfully gapped: 20 Length of query: 715 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 623 Effective length of database: 1,184,250 Effective search space: 737787750 Effective search space used: 737787750 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)