BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0364.p
         (307 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Her...   613   e-177
gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Her...   313   1e-86
gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Her...   142   3e-35

>gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score =  613 bits (1581), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 304/307 (99%), Positives = 307/307 (100%)

Query: 1   MANFDIHQIVQSLHEARVGWRVAQRRNNDSSGREFPSRDALDGIVTTLKGVLFPMRLGPP 60
           MANFDIHQIVQSLHEARVGWRVAQRRNNDSSGREFPSRDALDGIVTTLKGVLFPMRLGPP
Sbjct: 1   MANFDIHQIVQSLHEARVGWRVAQRRNNDSSGREFPSRDALDGIVTTLKGVLFPMRLGPP 60

Query: 61  DLRQESENFHVAHALDAALHALLGQVRLELKYSAGLSGRPTPNLEQDAISITRAFGASLP 120
           DLRQESENFHVAHALDAALHALLGQVRLELKYSAGLSGRPTPNLEQDAISITRAFGASLP
Sbjct: 61  DLRQESENFHVAHALDAALHALLGQVRLELKYSAGLSGRPTPNLEQDAISITRAFGASLP 120

Query: 121 QIRSQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAEL 180
           QIRSQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAEL
Sbjct: 121 QIRSQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAEL 180

Query: 181 AHAATGIDIHPGAQIGTGFFIDHGTGVVIGETAIIGNNVRIYQAVTLGAKRFPTDAEGKL 240
           AHAATGIDIHPGAQIGTGFFIDHGTGVVIGETA+IGNNVRIYQAVTLGAKRFPTDA+GKL
Sbjct: 181 AHAATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDADGKL 240

Query: 241 EKGRARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAGAHISQAASREDSL 300
           EKGRARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAGAHISQAASREDSL
Sbjct: 241 EKGRARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAGAHISQAASREDSL 300

Query: 301 SLASAGA 307
           SLA+AGA
Sbjct: 301 SLANAGA 307


>gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  313 bits (802), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 158/267 (59%), Positives = 194/267 (72%), Gaps = 2/267 (0%)

Query: 33  REFPSRDALDGIVTTLKGVLFPMRLGPPDLRQESENFHVAHALDAALHALLGQVRLELKY 92
           RE PSR+A+  ++  L+  LFP   G  DL  E+ ++ V   L+  L  L  QVR  L +
Sbjct: 44  RELPSREAMHKLLQHLQAALFPTHYGHTDLSDETIDYFVGSQLNTGLSILKEQVRRSLYF 103

Query: 93  SAGLSGRPTPNLEQDAISITRAFGASLPQIRSQLDTDVLAAYQGDPAARSVDEVLLCYPG 152
           S+ L  +    L + A  ITR F   LP +R  L +D+ AAY GDPAA S+ E+LLCYPG
Sbjct: 104 SSDL--QEDAPLREQAARITRDFAHQLPAVRDVLVSDIQAAYHGDPAASSISEILLCYPG 161

Query: 153 ALAMIHYRLAHRLYQLGLPLLARIIAELAHAATGIDIHPGAQIGTGFFIDHGTGVVIGET 212
             A+I++RLAH L+QLG PLLAR+IA++AH+ATGIDIHP AQIG  FFIDHGTGVVIGET
Sbjct: 162 TTAIIYHRLAHALHQLGAPLLARLIADIAHSATGIDIHPAAQIGPSFFIDHGTGVVIGET 221

Query: 213 AIIGNNVRIYQAVTLGAKRFPTDAEGKLEKGRARHPIVEDDVVIYAGATILGRIRLGRGA 272
            IIG NVR+YQAVTLGAKRFP + +G L KG  RHPIVEDDVV+YAGAT+LGRI +GRG+
Sbjct: 222 TIIGRNVRLYQAVTLGAKRFPQEPDGSLVKGIPRHPIVEDDVVVYAGATLLGRITIGRGS 281

Query: 273 VIGGNVWLTHDVPAGAHISQAASREDS 299
           VIGGNVWLTH VPAG+++SQA    D 
Sbjct: 282 VIGGNVWLTHSVPAGSNVSQAEMLSDC 308


>gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score =  142 bits (358), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 100/164 (60%), Gaps = 8/164 (4%)

Query: 124 SQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAELAHA 183
           S+L  D+ +    DPAAR+  EVL CYPG  A+I +R A   +Q  L  L R I++L   
Sbjct: 3   SRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLGRM 62

Query: 184 ATGIDIHPGAQIGTGFFIDHGTGVVIGETAIIGNNVRIYQAVTLGAKRFPTDAEGKLEKG 243
            TGI+IHPGA IG   FIDHG GVVIGETAI+G++  IYQ VTLG           L KG
Sbjct: 63  LTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLVKG 114

Query: 244 RARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAG 287
             RHP +   V+I AGA +LG   +G GA +G N  +T +VPAG
Sbjct: 115 AKRHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAG 158


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.138    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,034,758
Number of extensions: 47303
Number of successful extensions: 144
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 3
Length of query: 307
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 222
Effective length of database: 1,217,395
Effective search space: 270261690
Effective search space used: 270261690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)