BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0291.p (995 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310170|ref|YP_003774262.1| diguanylate cyclase/phosphodies... 2053 0.0 gi|300314042|ref|YP_003778134.1| signal transduction protein con... 374 e-104 gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodies... 369 e-103 gi|300312026|ref|YP_003776118.1| signal transduction protein con... 365 e-101 gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [... 353 5e-98 >gi|300310170|ref|YP_003774262.1| diguanylate cyclase/phosphodiesterase A protein [Herbaspirillum seropedicae SmR1] Length = 1002 Score = 2053 bits (5318), Expect = 0.0, Method: Compositional matrix adjust. Identities = 995/995 (100%), Positives = 995/995 (100%) Query: 1 MGEVDHQRLSGSERDALLAALWRSMAILEFSADGTVLEANENFLAMLGYRRADVVGQHHR 60 MGEVDHQRLSGSERDALLAALWRSMAILEFSADGTVLEANENFLAMLGYRRADVVGQHHR Sbjct: 8 MGEVDHQRLSGSERDALLAALWRSMAILEFSADGTVLEANENFLAMLGYRRADVVGQHHR 67 Query: 61 MLCDPAYVQTDAYQQFWEHLRKGELIAGTLQRRHVGGATVWLEALCSPILDAQGQLLKVI 120 MLCDPAYVQTDAYQQFWEHLRKGELIAGTLQRRHVGGATVWLEALCSPILDAQGQLLKVI Sbjct: 68 MLCDPAYVQTDAYQQFWEHLRKGELIAGTLQRRHVGGATVWLEALCSPILDAQGQLLKVI 127 Query: 121 SVAADISAHIDDSRHSNSILSALNRSLGVVELSPEGVILAANGNYLKTMEYLAEDLLGQP 180 SVAADISAHIDDSRHSNSILSALNRSLGVVELSPEGVILAANGNYLKTMEYLAEDLLGQP Sbjct: 128 SVAADISAHIDDSRHSNSILSALNRSLGVVELSPEGVILAANGNYLKTMEYLAEDLLGQP 187 Query: 181 HSILCEADYAASEEYTCFWRDVSLGRFFSGRFPRRTRSGRTIWWEATYSPLLDAHGKAER 240 HSILCEADYAASEEYTCFWRDVSLGRFFSGRFPRRTRSGRTIWWEATYSPLLDAHGKAER Sbjct: 188 HSILCEADYAASEEYTCFWRDVSLGRFFSGRFPRRTRSGRTIWWEATYSPLLDAHGKAER 247 Query: 241 VICIGTDVTYRVTREKSDREHLHLLSLGINETDNAVLITDDQNRIVFHNTGFTRMLGFES 300 VICIGTDVTYRVTREKSDREHLHLLSLGINETDNAVLITDDQNRIVFHNTGFTRMLGFES Sbjct: 248 VICIGTDVTYRVTREKSDREHLHLLSLGINETDNAVLITDDQNRIVFHNTGFTRMLGFES 307 Query: 301 QQVIGRLPGELFASRPTFVKSLERCHGELVQGRSYHTEELIHDMQEQPVWISAVVNPILD 360 QQVIGRLPGELFASRPTFVKSLERCHGELVQGRSYHTEELIHDMQEQPVWISAVVNPILD Sbjct: 308 QQVIGRLPGELFASRPTFVKSLERCHGELVQGRSYHTEELIHDMQEQPVWISAVVNPILD 367 Query: 361 GAGKLIHAVCVMTDITNTKVHEVLQYRVLNAMARDSSLSEQMNLLCEEVERVAPEVIASV 420 GAGKLIHAVCVMTDITNTKVHEVLQYRVLNAMARDSSLSEQMNLLCEEVERVAPEVIASV Sbjct: 368 GAGKLIHAVCVMTDITNTKVHEVLQYRVLNAMARDSSLSEQMNLLCEEVERVAPEVIASV 427 Query: 421 LRVDEHGCLRTLAAPSLPEAYSKAIDGLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWND 480 LRVDEHGCLRTLAAPSLPEAYSKAIDGLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWND Sbjct: 428 LRVDEHGCLRTLAAPSLPEAYSKAIDGLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWND 487 Query: 481 YKHLALPHGLRACWSTPIKSASGQVIGTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIER 540 YKHLALPHGLRACWSTPIKSASGQVIGTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIER Sbjct: 488 YKHLALPHGLRACWSTPIKSASGQVIGTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIER 547 Query: 541 EDARARIHQLAFYDSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSL 600 EDARARIHQLAFYDSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSL Sbjct: 548 EDARARIHQLAFYDSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSL 607 Query: 601 GHQAGDELLRTVATRLQSQARRSDIVGRLSGDEFVVVLTQYDTQHLTEVVKRIQERLAMP 660 GHQAGDELLRTVATRLQSQARRSDIVGRLSGDEFVVVLTQYDTQHLTEVVKRIQERLAMP Sbjct: 608 GHQAGDELLRTVATRLQSQARRSDIVGRLSGDEFVVVLTQYDTQHLTEVVKRIQERLAMP 667 Query: 661 CHINGTPLNPSASIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQ 720 CHINGTPLNPSASIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQ Sbjct: 668 CHINGTPLNPSASIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQ 727 Query: 721 ERLALESALRDALRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAE 780 ERLALESALRDALRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAE Sbjct: 728 ERLALESALRDALRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAE 787 Query: 781 ECGLIGELGKWALEEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYAL 840 ECGLIGELGKWALEEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYAL Sbjct: 788 ECGLIGELGKWALEEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYAL 847 Query: 841 EPSDLTLEITETVLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKL 900 EPSDLTLEITETVLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKL Sbjct: 848 EPSDLTLEITETVLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKL 907 Query: 901 DQSFVRDMAKDPAVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFS 960 DQSFVRDMAKDPAVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFS Sbjct: 908 DQSFVRDMAKDPAVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFS 967 Query: 961 RPMSADALENWVRDLHAGGSPDGRWAPPCKSAAPG 995 RPMSADALENWVRDLHAGGSPDGRWAPPCKSAAPG Sbjct: 968 RPMSADALENWVRDLHAGGSPDGRWAPPCKSAAPG 1002 >gi|300314042|ref|YP_003778134.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 948 Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/421 (46%), Positives = 263/421 (62%), Gaps = 1/421 (0%) Query: 554 DSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSLGHQAGDELLRTVA 613 D+LTGL NR +L QAI AER + V+F+DLDRFK VND+LGH+AGD LLRTVA Sbjct: 522 DTLTGLINRHMLRHHLEQAIGVAERQKQALWVVFVDLDRFKFVNDTLGHKAGDTLLRTVA 581 Query: 614 TRLQSQARRSDIVGRLSGDEFVVVLTQYDTQHL-TEVVKRIQERLAMPCHINGTPLNPSA 672 RL++ R +D V RL GDEF+++L + D L T ++RI + +A P + G L + Sbjct: 582 GRLRAAVREADTVARLGGDEFIMILPEQDELTLDTRSLQRIMDAVAAPVTLGGHTLFMTC 641 Query: 673 SIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQERLALESALRDA 732 S+GVA +P++G D ETL+ ADIAMY+ K R F F++ MN A ERL +E LR+A Sbjct: 642 SVGVACYPNDGTDGETLIKHADIAMYRGKQTGRNNFQFYTPAMNEQALERLRIEGDLRNA 701 Query: 733 LRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAEECGLIGELGKWA 792 L G+ L++QP++ L + G EAL RW HPQLG +SP RFI +AEE GLI +G W Sbjct: 702 LDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAEETGLILPIGAWV 761 Query: 793 LEEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYALEPSDLTLEITET 852 L AC Q W+ G S+SVNLS F DL + +L L P L LE+TE+ Sbjct: 762 LRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGLPPESLELELTES 821 Query: 853 VLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKLDQSFVRDMAKDP 912 ++M +A + LG+ L++DDFGTGYSSL YL++ P+ LK+D+SFVRD+ D Sbjct: 822 LMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKIDRSFVRDITIDA 881 Query: 913 AVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFSRPMSADALENWV 972 +A+T ++I + LKL V+AEGVE EQ L GCD QGYLFS P+ AD E + Sbjct: 882 DDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFSPPVPADKFEQIL 941 Query: 973 R 973 R Sbjct: 942 R 942 >gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 369 bits (946), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/444 (44%), Positives = 269/444 (60%), Gaps = 5/444 (1%) Query: 539 EREDARARIHQLAFYDSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVND 598 ER+ A + A +D+LTGLPNR++L +A+ A + + AV F+DLD+FK +ND Sbjct: 254 ERKAHEAEMRHQATHDALTGLPNRNMLHEHLQRALRVARQKGALTAVAFVDLDQFKFIND 313 Query: 599 SLGHQAGDELLRTVATRLQSQARRSDIVGRLSGDEFVVVLTQYDTQH---LTEVVKRIQE 655 SLGHQ GDELL+TVA RLQ+ R +D+V R GDEFV+VL Q T+ + EV++RI Sbjct: 314 SLGHQVGDELLKTVAQRLQACLREADMVARQGGDEFVLVL-QNQTEGEAGIAEVMQRILA 372 Query: 656 RLAMPCHINGTPLNPSASIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEM 715 +A P +ASIGV+ +P +G D+E+LL AD AMY+AK R F FF+ M Sbjct: 373 AVARPWQAGDREFQVTASIGVSRYPADGKDVESLLKHADSAMYRAKEQGRNNFQFFAPWM 432 Query: 716 NSMAQERLALESALRDALRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRF 775 +S RL + LR AL + +L +QP++ L D L G EAL RW PQ G + P RF Sbjct: 433 DSQVSNRLEMLINLRRALDQDEFKLYYQPKLSLQDGRLIGAEALIRWESPQQGMVPPDRF 492 Query: 776 IPIAEECGLIGELGKWALEEACFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLL 835 IP AEE GLI +G+W L AC Q W++ G+ ++VNLS + LP FV G+L Sbjct: 493 IPFAEEAGLIVPIGEWVLRTACRQNQAWQQAGLPPIPVAVNLSPRQLNQ-SLPDFVAGVL 551 Query: 836 RRYALEPSDLTLEITETVLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPV 895 + L S L LEITE V+M + T+ A+ LG+ +++DDFGTGYSSL YLR+ PV Sbjct: 552 AQSGLAASWLELEITENVVMKDAEKSVATLHALKRLGLQISVDDFGTGYSSLSYLRRFPV 611 Query: 896 SELKLDQSFVRDMAKDPAVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQ 955 LK+D+SFVRD+ +D +A+ A+I + L L V+AEGVED EQ+A L CD Q Sbjct: 612 DALKIDKSFVRDIVRDADSAAIVKAIISLAHILNLRVIAEGVEDEEQHAFLKENACDEVQ 671 Query: 956 GYLFSRPMSADALENWVRDLHAGG 979 GY F +PM W+ + G Sbjct: 672 GYYFGKPMEVAVFTAWMSEQAQAG 695 >gi|300312026|ref|YP_003776118.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 1106 Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust. Identities = 229/707 (32%), Positives = 367/707 (51%), Gaps = 23/707 (3%) Query: 271 ETDNAVLITDDQNRIVFHNTGFTRMLGF-ESQQVIGRLPGELFASRPTFVKSLERCHGEL 329 E ++ +++ + R + N R G + +++IGR G LF+ + + + +E+ + Sbjct: 386 EGNDPIVLISAELRYLDCNAAALRFFGVPDKERIIGRKVG-LFSRQKS--RHMEQPDIDE 442 Query: 330 VQGRSYHTEELIHDMQEQPVWISAVVNPILDGAGKLIHA--------VCVMTDITNTKVH 381 + R ++ +Q W++ N I+ L A ++ DI+ K Sbjct: 443 LVAR------VLSGQPQQFEWVTVRRNKIIHTDVTLNRAEFERGYAIFAILRDISARKRA 496 Query: 382 EVLQY---RVLNAMARDSSLSEQMNLLCEEVERVAPEVIASVLRVDEHGC-LRTLAAPSL 437 E+LQ RVL+ + D L + + + P SV+ V+E ++ + Sbjct: 497 ELLQSEQNRVLHMVMADDELDGVLYEIVNFADAQIPYGACSVMLVNEQASHFTSVLSHRY 556 Query: 438 PEAYSKAIDGLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWNDYKHLALPHGLRACWSTP 497 P +A+ G+ + G AA I +I DP + L +C + P Sbjct: 557 PPRLIRALQGMPIRHGCGVGAEAALRRGPCIVANIAQDPITEHLRPLIDTEIYPSCGAWP 616 Query: 498 IKSASGQVIGTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIEREDARARIHQLAFYDSLT 557 I GQ++G F + PS + L L ++AIE A RI LA YD LT Sbjct: 617 IIGKEGQLLGVFAALLKENQAPSNEYLQLANIAADLASVAIESRRADERIRHLAHYDELT 676 Query: 558 GLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSLGHQAGDELLRTVATRLQ 617 GLPNR L AI AE VAV+ +DLDRFK +ND+ GH+ G+ +L+ +A R + Sbjct: 677 GLPNRFLCTQHVSNAITHAEHRNGMVAVILMDLDRFKNINDTFGHETGEAVLQEIAQRFR 736 Query: 618 SQARRSDIVGRLSGDEFVVVLTQYDTQ-HLTEVVKRIQERLAMPCHINGTPLNPSASIGV 676 + R DI+ R+ GDEF+V++ +D L E+ +++ P I+G S SIG+ Sbjct: 737 NSLRELDILARVGGDEFIVLVDDFDDPVQLGEIAQKLLTEARKPFIIDGQEAMLSVSIGI 796 Query: 677 AIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFSEEMNSMAQERLALESALRDALRGG 736 A +P +G++ +TL+ ADIAMY+AK + + FFS+E+N+ ER+ALE+ LR A+ Sbjct: 797 ATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSDEINTNTVERIALEAELRRAIERA 856 Query: 737 DLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISPGRFIPIAEECGLIGELGKWALEEA 796 + +++QP+I+L + + G EAL RW HP G + PG FI +AEE LI ++G L+ A Sbjct: 857 EFVVHYQPKIELAEGRIVGAEALVRWQHPLRGLLPPGEFITLAEETRLIDQIGLLVLDVA 916 Query: 797 CFQLSDWRRRGIQVPSISVNLSATNFHDLDLPQFVTGLLRRYALEPSDLTLEITETVLMD 856 C + R++ + IS+NL+ + F D L + ++ R+ PS L EITE+++M Sbjct: 917 CRDIGLMRQQQMTCGRISINLTGSQFGDERLLDDIKEVVDRHGTPPSCLEFEITESMVMH 976 Query: 857 TNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLRKLPVSELKLDQSFVRDMAKDPAVSA 916 + + A G +++DDFGTGYSSL YL++ PV+ LK+D+SF+ D+ +P SA Sbjct: 977 NRERAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKIDKSFINDIPDNPNSSA 1036 Query: 917 LTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGCDVAQGYLFSRPM 963 + A+I + +L L VV EGVE +Q L G D QGY FS+P+ Sbjct: 1037 IVQAIIAMSHALNLKVVTEGVETEKQLQALREFGSDEYQGYYFSKPV 1083 >gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 1036 Score = 353 bits (905), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 185/444 (41%), Positives = 264/444 (59%), Gaps = 8/444 (1%) Query: 539 EREDARARIHQLAFYDSLTGLPNRSLLLVQAGQAIAAAERNCSTVAVMFIDLDRFKQVND 598 +R+ A RI +LAF+D+LT LPNR+LLL + QAIA + R + A++FIDLD FK +ND Sbjct: 587 DRKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLND 646 Query: 599 SLGHQAGDELLRTVATRLQSQARRSDIVGRLSGDEFVVVL------TQYDTQHLTEVVKR 652 ++GH+ GD LL+ VA RL + R +D V R+ GDEFVVVL Q + ++ Sbjct: 647 TIGHEKGDTLLKQVAQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEK 706 Query: 653 IQERLAMPCHINGTPLNPSASIGVAIFPDNGNDIETLLHRADIAMYQAKAVNRGRFSFFS 712 I L ++ +ASIG +F ++ L+ +AD+AMY+AK R FF Sbjct: 707 ILTALGSTYQLDDVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFD 766 Query: 713 EEMNSMAQERLALESALRDALRGGDLELNFQPQIKLHDQSLHGVEALARWHHPQLGQISP 772 M + ER LE+ LR A+ G L L++QPQ+ + + G E L RW HPQ G + P Sbjct: 767 PAMQTAVLERATLEAGLRKAIDGNQLLLHYQPQV-VEGGRVTGAEVLVRWQHPQRGMVPP 825 Query: 773 GRFIPIAEECGLIGELGKWALEEACFQLSDWRRRGIQVP-SISVNLSATNFHDLDLPQFV 831 G FIP+AEE GLI LG W LE AC QL+ W + SI+VN+SA + D Q V Sbjct: 826 GDFIPLAEETGLILSLGNWVLETACRQLATWAAQPQMADLSIAVNVSAPQLREPDFVQTV 885 Query: 832 TGLLRRYALEPSDLTLEITETVLMDTNPSTSQTIAAVHALGIPLAMDDFGTGYSSLGYLR 891 + R P L LE+TE++L+D Q + A+ A G+ ++DDFGTGYSSL YL+ Sbjct: 886 LDTIERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLK 945 Query: 892 KLPVSELKLDQSFVRDMAKDPAVSALTNAVIRIGESLKLTVVAEGVEDAEQYALLISQGC 951 +LP+++LK+DQSFVRD+ DP +++ ++ + +SL L V+AEGVE Q + L GC Sbjct: 946 RLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGC 1005 Query: 952 DVAQGYLFSRPMSADALENWVRDL 975 QGY F RP++ +A E + ++ Sbjct: 1006 HAYQGYFFCRPVTVEAFEKFAQEF 1029 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,214,073 Number of extensions: 138484 Number of successful extensions: 555 Number of sequences better than 1.0e-08: 45 Number of HSP's gapped: 485 Number of HSP's successfully gapped: 45 Length of query: 995 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 900 Effective length of database: 1,170,045 Effective search space: 1053040500 Effective search space used: 1053040500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)