BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0249.p (542 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 1030 0.0 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 439 e-124 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 414 e-116 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 385 e-108 gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [H... 377 e-105 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/521 (99%), Positives = 519/521 (99%) Query: 22 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 81 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ Sbjct: 1 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 60 Query: 82 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 141 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM Sbjct: 61 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 120 Query: 142 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 201 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE Sbjct: 121 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 180 Query: 202 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMV 261 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGEL RDEIDSERIVQMMV Sbjct: 181 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMV 240 Query: 262 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE 321 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE Sbjct: 241 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE 300 Query: 322 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM 381 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM Sbjct: 301 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM 360 Query: 382 NVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP 441 NVASRHTRLGLVRSRSL GVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP Sbjct: 361 NVASRHTRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP 420 Query: 442 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT 501 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT Sbjct: 421 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT 480 Query: 502 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG 542 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG Sbjct: 481 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG 521 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 439 bits (1128), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/496 (47%), Positives = 330/496 (66%), Gaps = 6/496 (1%) Query: 26 PLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEIL 85 P++ +R + K F LAL + + GE+HALMGENGAGKSTLMK+LSGV+ D G+IL Sbjct: 21 PVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDIL 80 Query: 86 LDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGL-IDHAAMRSR 144 LDG+PV + +P ++A GI +I+QEL + ++S A N+F+G E R +GL ID + + Sbjct: 81 LDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQ 140 Query: 145 TDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLF 204 A+ ++ S G L++A QQ VEIA+AL SR++IMDEPTAAL+ E +LF Sbjct: 141 AAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELF 200 Query: 205 NVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGRS 264 ++R L+ +G+ I+YISH+M E+ +ADRV+V+RDG ++ + E + I+ MMVGR+ Sbjct: 201 RIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRA 260 Query: 265 LSEFYQHQRIAPADAAQLPTVMQVRALAGGK-IRPASFDVRAGEVLGFAGLVGAGRTELA 323 L QRI P D ++ V++VR L G+ IR SF +R GE+LGFAGL+GAGRTE+A Sbjct: 261 LD---GEQRIPP-DTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVA 316 Query: 324 RLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNV 383 R +FGADP G+I++ G I P A+ GI Y+ EDRK GL + M V AN ++ Sbjct: 317 RAIFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSS 376 Query: 384 ASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKV 443 R TR+G + R++R A+ +++L +K E LSGGNQQK+++A+WL + Sbjct: 377 MGRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDI 436 Query: 444 LILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGE 503 L DEPTRG+D+ AKSEIY+L+ LA QG A+V+ISSELPEV+ + RVLVM EG ITGE Sbjct: 437 LFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGE 496 Query: 504 LAGAAITQENIMRLAT 519 LA A TQE IM+LAT Sbjct: 497 LARADATQEKIMQLAT 512 Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 132/252 (52%), Gaps = 10/252 (3%) Query: 18 IPVDMTQTPL-LQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGV 76 IP D ++ + L++RG+ + A+ D+ T+R GEI G GAG++ + + + G Sbjct: 267 IPPDTSRNDVVLEVRGLNRG----RAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGA 322 Query: 77 HAPDQGEILLDGRPVALRDPGASRAAGINLIYQE---LAVAPNISVAANVFMGSELR-TR 132 + GEI++ G ++ P + A GI + ++ +A + V AN+ + S R TR Sbjct: 323 DPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTR 382 Query: 133 LGLIDHAAMRSRTDAVLRQLGAGFGASDLAGRL-SIAEQQQVEIARALVHRSRIVIMDEP 191 +G +D A+R +RQL + + RL S QQ++ IA+ L+ I+ DEP Sbjct: 383 VGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEP 442 Query: 192 TAALSERETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEI 251 T + +++ ++ L ++G AI+ IS + EV ++ RV V+ +G GELAR + Sbjct: 443 TRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADA 502 Query: 252 DSERIVQMMVGR 263 E+I+Q+ R Sbjct: 503 TQEKIMQLATQR 514 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust. Identities = 223/507 (43%), Positives = 316/507 (62%), Gaps = 5/507 (0%) Query: 24 QTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGE 83 + +LQ+ GI+K+FG L + L +R GE+HAL+GENGAGKSTLMK+L G+ PD GE Sbjct: 2 EAAMLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGE 61 Query: 84 ILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRS 143 I +DG+P A+ A G+ +++QE ++ P + N+F+ ELR+R G + AAMR Sbjct: 62 IRIDGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRR 121 Query: 144 RTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQL 203 R ++ QLG +LS+A+QQ VEIA+AL +RI+++DEPTA L+ E E L Sbjct: 122 RAQEIIGQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHL 181 Query: 204 FNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGR 263 F V+R LR +G+AII+ISH + E++ + DR+TVLRDG++V A E+D R+V+MMVGR Sbjct: 182 FAVMRSLRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGR 241 Query: 264 SLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPAS-FDVRAGEVLGFAGLVGAGRTEL 322 + + + A + V++V AL + P S F +R GE+LGFAGLVG+GRTE Sbjct: 242 RIENCFP-PKPAKGGEGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTET 300 Query: 323 ARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMN 382 + GA + + G P+ P A++AGI +PE RK QGL ++ N ++N Sbjct: 301 VLAMLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLN 360 Query: 383 VASRHTRLG--LVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIA 440 ++ RLG + R + AA+QR+ VK + V LSGGNQQKV++ARW+ A Sbjct: 361 NYGKY-RLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHA 419 Query: 441 PKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 500 KVLI DEPTRG+D+ AKSEIYQL+ +QG ++++ISSELPEV+G+ DRV V R G I Sbjct: 420 MKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGI 479 Query: 501 TGELAGAAITQENIMRLATDTNVPRTA 527 L G A+ E IM AT + A Sbjct: 480 VATLEGEAVNAEEIMTHATTGRIRHAA 506 Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%) Query: 296 IRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRA 355 +R +VRAGEV G GAG++ L ++L G G+I ++G+P D RAA+ Sbjct: 21 LRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAG 80 Query: 356 GIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAH 415 G+ V ++ + A + +R G ++ ++R A+ I +L V + Sbjct: 81 GVGVVFQEFS----LIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQEIIGQLGVAIPL 136 Query: 416 PETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAV 475 + PV KLS QQ V +A+ L + ++L+LDEPT + ++ ++ L +QGVA+ Sbjct: 137 -DVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAI 195 Query: 476 VVISSELPEVIGICDRVLVMREGMITGELAGAAITQENIMRLATDTNVPRTAP 528 + IS L E+ ICDR+ V+R+G A A + Q ++ + + P Sbjct: 196 IFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRIENCFP 248 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 385 bits (988), Expect = e-108, Method: Compositional matrix adjust. Identities = 215/513 (41%), Positives = 315/513 (61%), Gaps = 15/513 (2%) Query: 27 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGV--HAPDQGEI 84 LL+M+GI KSFG AL+ + + IRPGE L GENGAGKSTLMK+LSGV H +GEI Sbjct: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 Query: 85 LLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSR 144 L DG+P+ + AAGI +I+QEL + P +SVA N+FMG E+ G +++ AM R Sbjct: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR 124 Query: 145 TDAVLRQLGAGFGASDLAGRLSIAE-----QQQVEIARALVHRSRIVIMDEPTAALSERE 199 + ++R+L D+ L +++ QQ VEIA+AL +R++I+DEP+++L+ E Sbjct: 125 AEELMRELNM----PDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE 180 Query: 200 TEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQM 259 L +++ L+ G+A +YISH++ EV + D ++V+RDG + E+D ++I+ Sbjct: 181 IGVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ 240 Query: 260 MVGRSLSEFYQHQRIAPADA---AQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVG 316 MVGR ++ Y + A + A+ T + ++ SF VR GE+LG AGLVG Sbjct: 241 MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 Query: 317 AGRTELARLLFGA-DPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAV 375 AGRTEL +FGA R G +LLEG+P P ++R G+ VPEDRK G+ + V Sbjct: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 Query: 376 AANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLAR 435 N T+ V +R +R + + + I R+ VK A P P+ LSGGNQQK +LA+ Sbjct: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAK 420 Query: 436 WLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVM 495 L PKVLILDEPTRGVD+ AK+EIY+L+ LA G+A++++SSEL EV+G+ DRVLV+ Sbjct: 421 MLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVI 480 Query: 496 REGMITGELAGAAITQENIMRLATDTNVPRTAP 528 EG + G+ ++QE ++ A + VP+ P Sbjct: 481 GEGRLRGDFVNDNLSQETVLAAAINQPVPQATP 513 >gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 516 Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/504 (41%), Positives = 321/504 (63%), Gaps = 16/504 (3%) Query: 26 PLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEIL 85 P+L++ GI K+F AL+D+ L + PGE+H LMG+NGAGKSTL+KVL+GVH PD G+I Sbjct: 11 PMLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIE 70 Query: 86 LDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRT 145 LDGR +A ++A GI+ +YQE+ + PN+SVA N+F+G TR G ID ++ +++ Sbjct: 71 LDGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVG-RYPTRFGRIDWKSVHTQS 129 Query: 146 DAVLRQLGAGFGASDLAGRLS---IAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQ 202 +L+QL D+A LS +A QQ V I+RAL ++++I+DEPT++L E E +Q Sbjct: 130 RQLLQQLQIDI---DVAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQ 186 Query: 203 LFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVG 262 LF V+RRLR++G+AI++++H + + Y ++DR+TVLR+G GE E+ +V MVG Sbjct: 187 LFKVLRRLREQGMAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVG 246 Query: 263 RSLSEFYQHQRIAPADAAQLPT--------VMQVRALAG-GKIRPASFDVRAGEVLGFAG 313 + + + + A A A++L T +Q G + P +R GEV G G Sbjct: 247 VTAVDHRKVEAGAEALASELSTDAAAAGAVFLQAEGFGRRGVLAPQDLQLRRGEVFGLCG 306 Query: 314 LVGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQM 373 L+G+GRTE+ARLLFGAD G + +EG+ V ++ PR A+ AGI + EDRK +G L++ Sbjct: 307 LLGSGRTEMARLLFGADRADCGQLRIEGKEVRLNVPRDAIAAGIGFCSEDRKKEGAILEL 366 Query: 374 AVAANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLL 433 +V N + + +R ++ + +A ++ L +K A ETP+G LSGGNQQK LL Sbjct: 367 SVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALL 426 Query: 434 ARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVL 493 ARWL P +LILDEPTRG+D+ AK EI V + +G++++ ISSE+PEV+ DR+L Sbjct: 427 ARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRML 486 Query: 494 VMREGMITGELAGAAITQENIMRL 517 V+R+ GE + +++++++ Sbjct: 487 VLRDRRACGEYRRGELDEQSVLQV 510 Score = 93.2 bits (230), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 23/244 (9%) Query: 35 KSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALR 94 + FG L+ L +R GE+ L G G+G++ + ++L G D G++ ++G+ V L Sbjct: 281 EGFGRRGVLAPQDLQLRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGKEVRLN 340 Query: 95 DPGASRAAGINLIYQ---------ELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRT 145 P + AAGI + EL+V NI +A L+ R GL R R Sbjct: 341 VPRDAIAAGIGFCSEDRKKEGAILELSVRENIILA--------LQARQGLF-RVLPRKRQ 391 Query: 146 DAVLRQL--GAGFGASDLA---GRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERET 200 + + G +DL G LS QQ+ +AR L ++I+DEPT + R Sbjct: 392 NQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAK 451 Query: 201 EQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMM 260 +++ + V + +G++I++IS + EV +DR+ VLRD GE R E+D + ++Q++ Sbjct: 452 QEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVI 511 Query: 261 VGRS 264 G + Sbjct: 512 AGET 515 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.136 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,697,221 Number of extensions: 75018 Number of successful extensions: 957 Number of sequences better than 1.0e-08: 132 Number of HSP's gapped: 613 Number of HSP's successfully gapped: 236 Length of query: 542 Length of database: 1,619,870 Length adjustment: 90 Effective length of query: 452 Effective length of database: 1,193,720 Effective search space: 539561440 Effective search space used: 539561440 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)