BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0243.p
         (373 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible ...   751   0.0  
gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible ...   107   2e-24

>gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/373 (99%), Positives = 372/373 (99%)

Query: 1   LKKIPNQPHHFTPQPLDNKRLANLCGALDENLRQISAALDVTIFRRGDRFIVTGTNAERA 60
           +KKIPNQPHHFTPQPLDNKRLANLCGALDENLRQISAALDVTIFRRGDRFIVTGTNAERA
Sbjct: 1   MKKIPNQPHHFTPQPLDNKRLANLCGALDENLRQISAALDVTIFRRGDRFIVTGTNAERA 60

Query: 61  VEVLERFYEKADRPVAVDDIQLALVEQRANAAADEEAGLPPLPARRGKAAVAAAVEEDKD 120
           VEVLERFY+KADRPVAVDDIQLALVEQRANAAADEEAGLPPLPARRGKAAVAAAVEEDKD
Sbjct: 61  VEVLERFYDKADRPVAVDDIQLALVEQRANAAADEEAGLPPLPARRGKAAVAAAVEEDKD 120

Query: 121 SQDPLPESPVLKTRKHDLRGRTPHQSQYLNAILEHDITFGVGPAGTGKTYLAVACAVDAL 180
           SQDPLPESPVLKTRKHDLRGRTPHQSQYLNAILEHDITFGVGPAGTGKTYLAVACAVDAL
Sbjct: 121 SQDPLPESPVLKTRKHDLRGRTPHQSQYLNAILEHDITFGVGPAGTGKTYLAVACAVDAL 180

Query: 181 ERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRTQKLFEKQA 240
           ERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRTQKLFEKQA
Sbjct: 181 ERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRTQKLFEKQA 240

Query: 241 IEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVDLHHGQ 300
           IEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVDLHHGQ
Sbjct: 241 IEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVDLHHGQ 300

Query: 301 KSGLVDAISVLQEVRGIAFSRFTSADVVRHPLVARIVDAYDAAGNSKPDTARATARTATN 360
           KSGLVDAISVL EVRGIAFSRFTSADVVRHPLVARIVDAYDAAGNSKPDTARATARTATN
Sbjct: 301 KSGLVDAISVLHEVRGIAFSRFTSADVVRHPLVARIVDAYDAAGNSKPDTARATARTATN 360

Query: 361 LLTKSAKPRHAKT 373
           LLTKSAKPRHAKT
Sbjct: 361 LLTKSAKPRHAKT 373


>gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 566

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 105/204 (51%), Gaps = 20/204 (9%)

Query: 132 KTRKHDLRGRTPHQSQYLNAIL--EHDITFGVGPAGTGKTYLAVACAV-DALERDAVQRI 188
           K     +  R   Q+  LN ++  E D    +G AGTGKT LA+A  +   LE      I
Sbjct: 347 KNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEI 406

Query: 189 VLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDL---------LGFDRTQKLFEKQ 239
           ++TR  V  GE +GFLPG   +K+ P++    D L  L          G   TQ L  + 
Sbjct: 407 IVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEVLNKSDGDAGEWGRAATQDLI-RS 465

Query: 240 AIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVD---L 296
            I+I  L +MRGRT  + F+I+DEAQN TP+QMK  +TR G G+K V  G++ Q+D   L
Sbjct: 466 RIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYL 525

Query: 297 HHGQKSGLVDAISVLQEVRGIAFS 320
             G  SGL     V+   +G A S
Sbjct: 526 TEGS-SGLT---YVVDRFKGWAHS 545


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,108,823
Number of extensions: 46018
Number of successful extensions: 173
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 2
Length of query: 373
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 286
Effective length of database: 1,207,925
Effective search space: 345466550
Effective search space used: 345466550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)