BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0238.p
         (512 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310053|ref|YP_003774145.1| apolipoprotein N-acyltransferas...  1009   0.0  

>gi|300310053|ref|YP_003774145.1| apolipoprotein N-acyltransferase
           transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 541

 Score = 1009 bits (2608), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/512 (99%), Positives = 510/512 (99%)

Query: 1   MPVAAGAINVFAFAPFKLWPLQILALAWLFHGVLAQPQASMRSQFLRGWLYGFGWAAAGV 60
           MPVAAGAINVFAFAPFKLWPLQILALAWLFHGVLAQPQASMRSQFLRGWLYGFGWAAAGV
Sbjct: 30  MPVAAGAINVFAFAPFKLWPLQILALAWLFHGVLAQPQASMRSQFLRGWLYGFGWAAAGV 89

Query: 61  HWLYISMHDYGSMPAWMAALAVALLALYLGLYAGAATAAASWLRTRWSSSPLVLALFMLP 120
           HWLYISMHDYG MPAWMAALAV LLALYLGLYAGAATAAASWLRTRWSSSPLVLALFMLP
Sbjct: 90  HWLYISMHDYGGMPAWMAALAVGLLALYLGLYAGAATAAASWLRTRWSSSPLVLALFMLP 149

Query: 121 ALWALMEWARGWVFTGFPWLVSGYAHTAGPLAGFAPVGGVYLVGWIAALIAGSLALLWMG 180
           ALWALMEWARGWVFTGFPWLVSGYAHTAGPLAGFAPVGGVYLVGWIAALIAGSLALLWMG
Sbjct: 150 ALWALMEWARGWVFTGFPWLVSGYAHTAGPLAGFAPVGGVYLVGWIAALIAGSLALLWMG 209

Query: 181 LSRKGVAGTGQRIILPLCAAALLCAGGVALRLVKWTAPQGQPISVRLLQGNIPQEMKFSN 240
           LSRKGVAGTGQRIILPLCAAALLCAGGVALRLVKWTAPQGQPISVRLLQGNIPQEMKFSN
Sbjct: 210 LSRKGVAGTGQRIILPLCAAALLCAGGVALRLVKWTAPQGQPISVRLLQGNIPQEMKFSN 269

Query: 241 DALVATLGMYEQMISAAPADLIATPETAIPLLPQQLPPDYLERIARFAQVSGSHLALGIP 300
           DALVATLGMYEQMISAAPADLIATPETAIPLLPQQLPPDYLERIARFAQVSGSHLALGIP
Sbjct: 270 DALVATLGMYEQMISAAPADLIATPETAIPLLPQQLPPDYLERIARFAQVSGSHLALGIP 329

Query: 301 LSDGPQLYANSVLGFGPGMGSAFLPYRYDKHHLVPFGEFIPPGFRWFVDMMHIPLGDMTR 360
           LSDGPQLYANSVLGFGPGMGSAFLPYRYDKHHLVPFGEFIPPGFRWFVDMMHIPLGDMTR
Sbjct: 330 LSDGPQLYANSVLGFGPGMGSAFLPYRYDKHHLVPFGEFIPPGFRWFVDMMHIPLGDMTR 389

Query: 361 GAPVQSPFGVKDQWVLPNICYEDLFGEEIAGQLRAAYRAAQPEASVLLNLSNIAWFGNSI 420
           GAPVQSPFGVKDQWVLPNICYEDLFGEEIAGQLRAAYRAAQPEASVLLNLSNIAWFGNSI
Sbjct: 390 GAPVQSPFGVKDQWVLPNICYEDLFGEEIAGQLRAAYRAAQPEASVLLNLSNIAWFGNSI 449

Query: 421 ALPQHLQISQMRTLETGRPMLRATNTGATAVILPGGATSELPPYTRGVLSATVQGYGGQT 480
           ALPQHLQISQMRTLETGRPMLRATNTGATAVILPGGATSELPPYTRGVLSATVQGYGGQT
Sbjct: 450 ALPQHLQISQMRTLETGRPMLRATNTGATAVILPGGATSELPPYTRGVLSATVQGYGGQT 509

Query: 481 PYILLGNKLVLGLALLMLLLAWGRNKAARIRH 512
           PYILLGNKLVLGLALLMLLLAWGRNKAARIRH
Sbjct: 510 PYILLGNKLVLGLALLMLLLAWGRNKAARIRH 541


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.139    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,624,700
Number of extensions: 69462
Number of successful extensions: 321
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 321
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 423
Effective length of database: 1,198,455
Effective search space: 506946465
Effective search space used: 506946465
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 133 (55.8 bits)