BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0182.p
         (308 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309999|ref|YP_003774091.1| hydrolase of the alpha/beta-hyd...   622   e-180

>gi|300309999|ref|YP_003774091.1| hydrolase of the
           alpha/beta-hydrolase fold protein [Herbaspirillum
           seropedicae SmR1]
          Length = 330

 Score =  622 bits (1605), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/308 (99%), Positives = 306/308 (99%)

Query: 1   VRKPVVAYRRERWEAPDGDFIDIDFVDGQPGRPLVVLFHGLEGSSDSHYSRALMAEVARR 60
           VRKP VAYRRERWEAPDGDFIDIDFVDGQPGRPLVVLFHGLEGSSDSHYSRALMAEVARR
Sbjct: 23  VRKPTVAYRRERWEAPDGDFIDIDFVDGQPGRPLVVLFHGLEGSSDSHYSRALMAEVARR 82

Query: 61  GWHGAIPHFRGCSGEINLAPRFYHSGDSAELDWIIRRLKLRQQDLVATHFYACGVSLGAN 120
           GWHGAIPHFRGCSGEINLAPRFYHSGDSAELDWIIRRLKLRQQDL ATHFYACGVSLGAN
Sbjct: 83  GWHGAIPHFRGCSGEINLAPRFYHSGDSAELDWIIRRLKLRQQDLAATHFYACGVSLGAN 142

Query: 121 ALLRWLGESQHQAEILDAACAVSAPLDLAGGGAALGAGFNRLYTWVFLRTMRPKCLAKLD 180
           ALLRWLGESQHQAEILDAACAVSAPLDLAGGGAALGAGFNRLYTWVFLRTMRPKCLAKLD
Sbjct: 143 ALLRWLGESQHQAEILDAACAVSAPLDLAGGGAALGAGFNRLYTWVFLRTMRPKCLAKLD 202

Query: 181 QFPGLFDREALLSARDLYAFDNIVTAPLHGYRNTEDYWDRASAKHILHDITVPTLVLNAR 240
           QFPGLFDREALLSARDLYAFDNIVTAPLHGYRNTEDYWDRASAKHILHDITVPTLVLNAR
Sbjct: 203 QFPGLFDREALLSARDLYAFDNIVTAPLHGYRNTEDYWDRASAKHILHDITVPTLVLNAR 262

Query: 241 NDPFLPEQHLPRTAAPEVVLDYPEQGGHVGFAAGGPPGRLDWLPRRLLHFLEGRSESSFA 300
           NDPFLPEQHLPRTAAPEVVLDYPEQGGHVGFAAGGPPGRLDWLPRRLLHFLEGRSESSFA
Sbjct: 263 NDPFLPEQHLPRTAAPEVVLDYPEQGGHVGFAAGGPPGRLDWLPRRLLHFLEGRSESSFA 322

Query: 301 AQAEAFHG 308
           AQAEAFHG
Sbjct: 323 AQAEAFHG 330


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.140    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 953,612
Number of extensions: 37718
Number of successful extensions: 103
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 223
Effective length of database: 1,217,395
Effective search space: 271479085
Effective search space used: 271479085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)