BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0018.p
         (196 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309839|ref|YP_003773931.1| metal-dependent phosphohydrolas...   157   5e-40

>gi|300309839|ref|YP_003773931.1| metal-dependent phosphohydrolase
           [Herbaspirillum seropedicae SmR1]
          Length = 975

 Score =  157 bits (397), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/92 (90%), Positives = 83/92 (90%), Gaps = 5/92 (5%)

Query: 76  RSAQDAGRIMTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVS 135
           RSAQDAGRIMTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVS
Sbjct: 66  RSAQDAGRIMTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVS 125

Query: 136 AVYVGYPNGDFLLVRAL-----YIFTRAPSSA 162
           AVYVGYPNGDFLLVRAL       F RAP SA
Sbjct: 126 AVYVGYPNGDFLLVRALRGAEQRSFFRAPESA 157



 Score =  143 bits (360), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 1   MTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVSAVYVGYPNG 60
           MTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVSAVYVGYPNG
Sbjct: 75  MTERSRRIIDPAVATLRQLAFDPITQAGELDTRLARIAAFSADLVANPLVSAVYVGYPNG 134

Query: 61  DFLLVRALRGA 71
           DFLLVRALRGA
Sbjct: 135 DFLLVRALRGA 145


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.131    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 622,925
Number of extensions: 26096
Number of successful extensions: 103
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 2
Length of query: 196
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 116
Effective length of database: 1,241,070
Effective search space: 143964120
Effective search space used: 143964120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)