BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0077.p (640 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310762|ref|YP_003774854.1| outer membrane ferric sideropho... 1290 0.0 gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore... 258 8e-70 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 229 4e-61 gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore rece... 184 2e-47 gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 169 5e-43 >gi|300310762|ref|YP_003774854.1| outer membrane ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 717 Score = 1290 bits (3338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/640 (99%), Positives = 638/640 (99%) Query: 1 MEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISDTRFDAFRIRGFSSANDLLLDGM 60 MEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISDTRFDAFRIRGFSSANDLLLDGM Sbjct: 78 MEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISDTRFDAFRIRGFSSANDLLLDGM 137 Query: 61 RDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQELASQATLSLGRAGL 120 RDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQ++ASQATLSLG AGL Sbjct: 138 RDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQDVASQATLSLGSAGL 197 Query: 121 LGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSWLLQAEYD 180 LGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSWLLQAEYD Sbjct: 198 LGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSWLLQAEYD 257 Query: 181 EYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDVIRDIHMSLRSTLTRALS 240 EYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDVIRDIHMSLRSTLTRALS Sbjct: 258 EYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDVIRDIHMSLRSTLTRALS 317 Query: 241 QDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLDRVQRTRYQQNLQQRSVQNNLELLGQ 300 QDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLDRVQRTRYQQNLQQRSVQNNLELLGQ Sbjct: 318 QDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLDRVQRTRYQQNLQQRSVQNNLELLGQ 377 Query: 301 LGAHDLLLGVEHSWQKREPRLWSVAAPAVSAVTPENTRNGDDPTTPFQMNYHKASNLGLY 360 LGAHDLLLGVEHSWQKREPRLWSVAAPAVSAVTPENTRNGDDPTTPFQMNYHKASNLGLY Sbjct: 378 LGAHDLLLGVEHSWQKREPRLWSVAAPAVSAVTPENTRNGDDPTTPFQMNYHKASNLGLY 437 Query: 361 VQDQITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTAHALSPRIGVVWEALPGQHAYL 420 VQD+ITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTAHALSPRIGVVWEALPGQHAYL Sbjct: 438 VQDKITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTAHALSPRIGVVWEALPGQHAYL 497 Query: 421 SWSKNFAPVGGDVIGITPDARGNFNDLKPQFSRQVEVGIKSEWLDRRLSTTLAWFQLELF 480 SWSKNFAPVGGDVIGITPDARGNFNDLKPQFSRQVE GIKSEWLDRRLSTTLAWFQLELF Sbjct: 498 SWSKNFAPVGGDVIGITPDARGNFNDLKPQFSRQVEAGIKSEWLDRRLSTTLAWFQLELF 557 Query: 481 NRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVRAGWAIQSAKIVQAEPKFVGKR 540 NRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVRAGWAIQSAKIVQAEPKFVGKR Sbjct: 558 NRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVRAGWAIQSAKIVQAEPKFVGKR 617 Query: 541 ASGVSGRGGSLFLSYAPTLGWFAELGLTVEGARYADRDNLLELPAYTRWDGKMGYRLDEA 600 ASGVSGRGGSLFLSYAPTLGWFAELGLTVEGARYADRDNLLELPAYTRWDGKMGYRLDEA Sbjct: 618 ASGVSGRGGSLFLSYAPTLGWFAELGLTVEGARYADRDNLLELPAYTRWDGKMGYRLDEA 677 Query: 601 EFTLAVTNLANRRYYESATGLSQVRPGAPRALLLTAAYKF 640 EFTLAVTNLANRRYYESATGLSQVRPGAPRALLLTAAYKF Sbjct: 678 EFTLAVTNLANRRYYESATGLSQVRPGAPRALLLTAAYKF 717 >gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 704 Score = 258 bits (660), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 221/677 (32%), Positives = 315/677 (46%), Gaps = 76/677 (11%) Query: 2 EVPQSIQSVSVEQVSVYGARTLAGALLGVPGIS-SISDTRFDAFRIRGFSSANDLLLDGM 60 +VPQ+I V + + A +L L VPG+ S D + D IRGF++ D +DG Sbjct: 66 DVPQTINVVPAQVIRDQNASSLQDVLKNVPGLGLSTGDGQRDQVFIRGFTAIGDQFVDGF 125 Query: 61 RDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQELAS----------- 109 RDD Y R L N+E VEV++GPA+VLYGRGS GG+INR++K+PG +++ Sbjct: 126 RDDALYFRDLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPGVDVSDVSFTANSTAGR 185 Query: 110 QATLSLGRAGLLGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESG 169 +A L LGRAG AL W R+ E SFR R AP++ Sbjct: 186 RAELDLGRAG--EGALSW----------RLTGAVERGDSFRAQQFIDRTAIAPSVALRFS 233 Query: 170 RDS-WLLQAEYDEYERVPDRGIP---GRAIATANGEPTAYALPSAGHEQFFGAAGRDVIR 225 D+ LLQ +Y E R+ D GIP GR + G T Y +A F ++ Sbjct: 234 ADTKLLLQMDYLEDRRMMDFGIPSYRGRPVDVDPG--TTYGARNARDADF--------VQ 283 Query: 226 DIHMSLRSTLTRALSQDWTLRHALALMDLNSNFDNT---FVTQAYQSAPLDLDRVQRTR- 281 S +T T + +++ R+ L D + N +NT V +A + L+ ++ R Sbjct: 284 SRVASTTATFTHRFNDEFSFRNGLRYYDYHLNRNNTNGGTVNEATATTTLNHAKLVRDEN 343 Query: 282 ---YQQNLQQRSVQNNLELLGQLGA--HDLLLGVEHSWQKREPRLWS--VAAPAVSAVTP 334 Q L Q+ QLG+ H++L G+E Q ++ S V P VS P Sbjct: 344 GWFNQSELTQKL---------QLGSIRHEILYGLELGSQSKDASQASGVVNFPGVSIFNP 394 Query: 335 ENTRNGDDPTTPFQMNYHKASNLGLYVQDQITLAAHWKMLAGLRWDRFEVDSR--NRRNG 392 + P + Y Y+QD ++L+ WK L GLR+DR+ SR N NG Sbjct: 395 VLPVVDPNRLNPPTLTYGTYDTFATYLQDSLSLSEQWKALVGLRYDRYRQQSRILNLANG 454 Query: 393 VRSE--RTAHALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGITPDARGNFNDLKPQ 450 ++ RT A+SPR G+VW+ Q YLSWS++F P G T +A DL P+ Sbjct: 455 STADLQRTDTAVSPRAGLVWQPSLTQSYYLSWSRSFQPSGESFALATNNA-----DLAPE 509 Query: 451 FSRQVEVGIKSEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSVEG 510 +R E G K ++ + R S T++ F+LE N A P G G +R G ELS Sbjct: 510 QTRNTEAGAKYDFWEGRASATVSVFRLERDNIKSALP--NGVVIPVGKQRTDGAELSFSA 567 Query: 511 ELAAPWFVRAGWAIQSAKIVQAEP-----KFVGKRASGVSGRGGSLFLSYAPTLGWFAEL 565 +L W + AG+A +A I ++ F GK A+ G+L+L+ G Sbjct: 568 DLKQGWKLLAGYAWLNAVITESSSFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGG 627 Query: 566 GLTVEGARYADRDNLLELPAYTRWDGKMGYRLDEAEFTLAVTNLANRRYYESATGLSQ-- 623 G GAR+A+ N + LP Y D YR + E L + NL N Y S G + Sbjct: 628 GANAVGARFANPGNTVTLPGYVTVDAMAAYRTSKYEVQLNIGNLFNTGYIISGHGTNPNL 687 Query: 624 VRPGAPRALLLTAAYKF 640 PGAPR + LT Y Sbjct: 688 SMPGAPRNVALTLRYHM 704 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 229 bits (585), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 197/665 (29%), Positives = 299/665 (44%), Gaps = 52/665 (7%) Query: 2 EVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISD--TRFDAFRIRGFSSAND----L 55 E+PQS+Q VS + + A L LL V G++ ++ +D + IRGFS + + + Sbjct: 67 ELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRGFSGSENGGMNI 126 Query: 56 LLDGMRDDPQYV--RGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQELASQATL 113 L +G + Y R + N+E V+ L+GPA+ LYG GG IN ++K+P + A+ L Sbjct: 127 LWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKSANALDL 186 Query: 114 SLGRAGLLGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSW 173 S+G +A+D L+ A R+N EH GS RD V R++FAPA W ++ Sbjct: 187 SIGSNDAYRSAVDSTGALSSTVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLLTENTI 246 Query: 174 L-LQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDVIRDIHMSLR 232 L + E+ + DRG I NG A LP + +F G I+ + + Sbjct: 247 LNYEGEFLRQKAPLDRG-----IVAVNGN--AGVLPVS---RFLGEPNDGDIKMQNQNHL 296 Query: 233 STLTRALSQDWTLRHALALMD--LNSNFDNTFVTQAYQSAPLDLDRVQRTRYQQNLQQRS 290 TL + L+++W LR + + L+ F QA D ++R R ++ Sbjct: 297 LTLEQRLNENWHLRTGIFHKEGSLDGYSTEAFALQA------DNATLRRQRRYRDYSWHD 350 Query: 291 VQNNLELLGQLGA----HDLLLGVEHSWQKREPRLW-----SVAAPAVSAVTPENTRNGD 341 E+ G+ H++L+G E W + R+ +VA AV+ P + Sbjct: 351 TSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYNPVYGQAQP 410 Query: 342 DPTTPFQMNYHKASNLGLYVQDQITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTAHA 401 PT + + S GLY+QDQ++L+ W++LAG+R D F N RNG + + HA Sbjct: 411 TPTANTDTSERQIST-GLYLQDQLSLSERWRLLAGVRADAFRSTLNNLRNGAVTRQDKHA 469 Query: 402 LSPRIGVVWEALPGQHAYLSWSKNFAP-VGGDVIGITPDARGNFNDLKPQFSRQVEVGIK 460 SPR+G+ + P Y+S SK+F P G DV G N P+ SR E G+K Sbjct: 470 YSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDVSG---------NAFSPETSRAAEAGLK 520 Query: 461 SEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVRA 520 + D+R TLA F + N DP P F +G R++G+EL L W V Sbjct: 521 FQSEDKRSGATLAVFDITKQNVLTTDPANPNFSIAAGEVRSKGVELDANARLGHHWRVTG 580 Query: 521 GWAIQSAKIVQAEPKFVGKRASGVSGRGGSLFLSYAPTLGWFAEL----GLTVEGARYAD 576 A A + + VG R + SL + A GL G R D Sbjct: 581 NLAYTDAYVSRDNTLPVGSRLVNIPRSSASLLAVFEDADAHGAPYGVGGGLNYVGRRTGD 640 Query: 577 RDNLLELPAYTRWDGKMGYRLD-EAEFTLAVTNLANRRYYESATGLSQVRPGAPRALLLT 635 + LP+Y ++ + + +L V NL N+RYY S+ + PG R L Sbjct: 641 QAGSFMLPSYVTARALAYWQFTPKMKLSLDVNNLFNKRYYSSSYNSLWIMPGDERNATLA 700 Query: 636 AAYKF 640 KF Sbjct: 701 LNIKF 705 >gi|300310281|ref|YP_003774373.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 715 Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 196/674 (29%), Positives = 291/674 (43%), Gaps = 85/674 (12%) Query: 1 MEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSISD--TRFDAFRIRGFSSAN-DLLL 57 +E+PQS++ ++ +Q+ GA LA + V GIS ++D +D F IRGFSS + L+ Sbjct: 79 LELPQSVRVMTTQQIDDLGAVRLADTVDYVSGISRLNDFGGTWDNFAIRGFSSTDMGFLV 138 Query: 58 DGMRDDPQYV--RGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQELASQATLSL 115 +G Y R IER+E L+GPAS LYG GG IN ++K+P ++ A +S Sbjct: 139 NGFPGSRGYNPRRDTATIERIEFLKGPASALYGSSEPGGTINIVTKKPQFSASNSAEVSA 198 Query: 116 GRAGLLGAALDWNRPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPALKWESGRDSWL- 174 G GL A +D PL+ + A R+ E S ++ R AP+L W +++ L Sbjct: 199 GTGGLRRATVDSTGPLSQNLAYRLIAMTEEGDSRSSLLSNRRSLVAPSLAWVIDKNTLLN 258 Query: 175 LQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDVI----RDIHMS 230 + E+ + DRGI G RD + D +M+ Sbjct: 259 YEGEFLQASTPLDRGI-------------------INVRGVLGGLPRDRVLSEPSDGNMA 299 Query: 231 LRS-----TLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSAPL--DLDRVQRTRYQ 283 +RS TL +LS+ W +R + + S+FD + T+A PL DL + RT Sbjct: 300 MRSNTHQLTLEHSLSEQWRMRLGASYKE--SSFDG-YYTEAKLRNPLQADLRTLDRTGTW 356 Query: 284 QNLQQRSVQNNLELLGQLG----AHDLLLGVEHS--WQKREPRLWS------VAAPAVSA 331 + L R + EL GQ AH L+G E S W E + + P A Sbjct: 357 RQLPSRDMSIQGELHGQFKTGDIAHTFLVGAEASKLWMNTEILRSTTLLPIDIYNPIYGA 416 Query: 332 VTPENTRNGDDPTTPFQMNYHKASNLGLYVQDQITLAAHWKMLAGLRWDRFE--VDSRNR 389 P DD T+ N + L+VQDQ++L+ WK+L GLRWD++ V SR Sbjct: 417 ARPAL----DDRTSSSDENQRVKA---LFVQDQLSLSPQWKLLGGLRWDQYNQSVVSRVA 469 Query: 390 RNGVRSERTAHALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGITPDARGNFNDLKP 449 G S+R + A+SPR G+ + YLS K+F G + P P Sbjct: 470 PVGTTSQRQS-AVSPRAGISYLPNAWSSVYLSAGKSFRGNSGVDVNGRP--------FDP 520 Query: 450 QFSRQVEVGIKSEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSVE 509 Q S E G+K + D RL A + + N + P F +G ++ G E Sbjct: 521 QRSTSYEAGLKLQSTDERLGANFAVYDITKTNV-LTTSDNPNFMAAAGEVKSTGFEADAY 579 Query: 510 GELAAPWFVRAGWAIQSAKIVQAEPKFVGKRASGVSGRGGSLFLSYAPTLGWFAE----L 565 G+L A W + A ++ A++ + G R + + L + L A Sbjct: 580 GQLNANWRLSANFSWDDARVSKDRTLPTGTRLANIPAYSAGLLVMREDALANGARYGVGG 639 Query: 566 GLTVEGARYADRDNLLELPAYT------RWDGKMGYRLDEAEFTLAVTNLANRRYYESAT 619 G+ G R + + LPAYT W RL +L V NL NR YY + Sbjct: 640 GVNYVGNRSGNAADTYSLPAYTLVKLLSYWQVSKNVRL-----SLDVHNLFNRNYYPGSW 694 Query: 620 GLSQVRPGAPRALL 633 V PGA R ++ Sbjct: 695 NNLYVMPGAERTVV 708 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 169 bits (429), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 179/666 (26%), Positives = 275/666 (41%), Gaps = 54/666 (8%) Query: 1 MEVPQSIQSVSVEQVSVYGARTLAGALLGVPGISSIS---DTR-FDAFRIRGFSSA--ND 54 +EVPQS+ V+ +++ G +L L +PG +S + D R ++ F +RGF +A Sbjct: 66 LEVPQSVSVVTRDEMDARGVTSLLDVLRYMPGANSETHGVDPRGYEYFNLRGFINAQVTS 125 Query: 55 LLLDGMRDDP----QYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQELASQ 110 L+G+R P Q+ +ER+EVLRGP SV +G+ GGVINR+SK PG ++ ++ Sbjct: 126 NFLNGLRQIPGGFGQFRTETYGMERIEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNE 185 Query: 111 ATLSLGRAGLLGAALDWN------RPLAPHWALRINTGREHAGSFRDTVNGTRQYFAPAL 164 + +G D N L L +++ ++ + + + R Y AP+L Sbjct: 186 LGVDIGSFNRKQVVADLNGHTQDGEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFYLAPSL 245 Query: 165 KWE-SGRDSWLLQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAAGRDV 223 W S S L A+Y + DR R A G + L G D Sbjct: 246 TWRPSASTSLTLMADY-----MNDRSGSSRWTAVRPGNVLTHTL--------IGDPNFDR 292 Query: 224 IRDIHMSLRSTLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLDRVQR--TR 281 + S WT R +L S V A L + R T Sbjct: 293 QSNDQWSFGYQFEHKFDNAWTFRQNFRQANLKS------VYAALNPGTLTGSVLTRGTTV 346 Query: 282 YQQNLQQRSVQNNLELLGQLGA--HDLLLGVEHSWQKREPRLWSVAAPAVSAVTPENTRN 339 Y + V N LE + GA H +L G++ S + AAP+++ P Sbjct: 347 YNSQVDNTLVDNQLEGRLKWGATEHTVLFGLDWSRMYDREVRYRGAAPSLNIDNPVYGVT 406 Query: 340 GDDPTTPFQMNYHKASNLGLYVQDQITLAAHWKMLAGLRWDRFEVDSRNRRNGVRSERTA 399 TT F + GLY QDQI + G RWD+ + ++RN N + Sbjct: 407 IPAATTLFGNLEENMNQTGLYAQDQIKFDQRLTLTLGGRWDKVKDETRNYFNRTTTRSDD 466 Query: 400 HALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGITPDARGNFNDLKPQFSRQVEVGI 459 ALS RIG+ + Y+S++ +F P G P P +RQ EVGI Sbjct: 467 SALSGRIGLSYLVTRDIAPYVSYATSFLPQTGSDFNGKP--------FDPTKARQAEVGI 518 Query: 460 KSEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSVEGELAAPWFVR 519 K + D + T A F+L N DP F SG ++RG+EL +GE+ + Sbjct: 519 KYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVLSGEIKSRGLELEAKGEIVKGLNLS 578 Query: 520 AGWAIQSAKIVQAEP-KFVGKRASGVSGRGGSLFLSYAPTLGWFAELGLT----VEGARY 574 A + K Q +GK+ V + S++ Y G A G+ G+ Y Sbjct: 579 ASYTYTDVKNTQNNTASLLGKQPILVPRQAASVWADYTVQGGPLAGAGIGGGARYTGSNY 638 Query: 575 ADRDNLLELPAYTRWDGKMGYRLDEAEFTLAVTNLANRRYYES-ATGLSQVRPGAPRALL 633 AD N ++ T +D Y L+ + L ++N+ N+ Y A + A R + Sbjct: 639 ADAANTVKNGGVTVFDAVFHYNLNRWRYALNISNITNKEYTSCLAEPTTTCFWAAERTAI 698 Query: 634 LTAAYK 639 L+A Y+ Sbjct: 699 LSARYR 704 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.318 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,062,030 Number of extensions: 90819 Number of successful extensions: 341 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 281 Number of HSP's successfully gapped: 22 Length of query: 640 Length of database: 1,619,870 Length adjustment: 91 Effective length of query: 549 Effective length of database: 1,188,985 Effective search space: 652752765 Effective search space used: 652752765 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)