BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0117.p (716 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 1415 0.0 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 405 e-114 gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 384 e-107 gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 189 8e-49 gi|300313664|ref|YP_003777756.1| tonB-dependent receptor for iro... 94 5e-20 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 1415 bits (3663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 708/718 (98%), Positives = 709/718 (98%), Gaps = 2/718 (0%) Query: 1 VALIFLAPLPALAQA--TAQDPQALPTVTVNASADASADGLPAEFAGGQVARGSRLGVLG 58 VALIFLAPLPALAQA TA D Q LPTVTVNASADASADGLPAEFAGGQVARGSRLGVLG Sbjct: 16 VALIFLAPLPALAQAQATAPDQQTLPTVTVNASADASADGLPAEFAGGQVARGSRLGVLG 75 Query: 59 NVDNLDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSD 118 NVDNLDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSD Sbjct: 76 NVDNLDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSD 135 Query: 119 DLMYNGLFGILPRQYVASEMMERVEVLYGASAFLNGATPGDAGLGGTINIVPKRAANEPL 178 DLMYNGLFGILPRQYVASEMMERVEV YGASAFLNGATPGDAGLGGTINIVPKRAANEPL Sbjct: 136 DLMYNGLFGILPRQYVASEMMERVEVQYGASAFLNGATPGDAGLGGTINIVPKRAANEPL 195 Query: 179 TDLTLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDY 238 TDLTLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDY Sbjct: 196 TDLTLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDY 255 Query: 239 RGNDFRLSADLGLQENNLSNVRPSVTIGAGLTSLPAAPSGSANYGQPWSYSNARDLFGTV 298 RGNDFRLSADLGLQENNLSNVRPSVTIGAGLTSLP APSGSANYGQPWSYSNARDLFGTV Sbjct: 256 RGNDFRLSADLGLQENNLSNVRPSVTIGAGLTSLPVAPSGSANYGQPWSYSNARDLFGTV 315 Query: 299 RGEWDLSSSTTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVATGEVGV 358 RGEWDLSSSTTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVATGEVGV Sbjct: 316 RGEWDLSSSTTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVATGEVGV 375 Query: 359 RTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLAD 418 RTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLAD Sbjct: 376 RTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLAD 435 Query: 419 PQTTIKTNLLSAVVSDTLGFYDDRLLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPM 478 PQTTIKTNLLSAVVSDTLGFYDDR+LVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPM Sbjct: 436 PQTTIKTNLLSAVVSDTLGFYDDRVLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPM 495 Query: 479 AGVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGL 538 AGVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGL Sbjct: 496 AGVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGL 555 Query: 539 GAAFFTTDRPLSYKDAVTNIEAANGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQT 598 GAAFFTTDRPLSYKDAVTNIEA NGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQT Sbjct: 556 GAAFFTTDRPLSYKDAVTNIEATNGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQT 615 Query: 599 NSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSPQYVDAANQLEVPSWVRY 658 NSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTS QYVDAANQLEVPSWVRY Sbjct: 616 NSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSTQYVDAANQLEVPSWVRY 675 Query: 659 DLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 716 DLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF Sbjct: 676 DLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 733 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 405 bits (1041), Expect = e-114, Method: Compositional matrix adjust. Identities = 264/721 (36%), Positives = 385/721 (53%), Gaps = 41/721 (5%) Query: 5 FLAPLPALAQATAQDPQALPTVTVNASADASADGLPAEFAGGQVARGSRLGVLGNVDNLD 64 L P+ LA A LP VT+ A+AD SA +AG +ARG LGVLGN +D Sbjct: 102 LLKPVDTLASAP------LPAVTIRAAADTSA------YAGAYLARGGALGVLGNRAVMD 149 Query: 65 SPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSDDLMYNG 124 P+ ++ YT +L+ DQQA V D + ND +R G F E+Y IRG+ S D+ NG Sbjct: 150 IPLATLNYTNELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYGLTSGDVGVNG 209 Query: 125 LFGILPRQYVASEMMERVEVLYGASAFLNGATPGDAGLGGTINIVPKRAANEPLTDLTLG 184 LFG+ + + M+ERV+VL G L+G +P + +GG+IN+V KRA +EPLT LT Sbjct: 210 LFGLASGNRMPAVMIERVDVLKGPGTLLHGISP-EGSIGGSINLVTKRAEDEPLTRLTAL 268 Query: 185 YESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYRGNDFR 244 Y+S +D+ RRFG Q+ G+R N G +A R++ +L +DYRG +R Sbjct: 269 YQSRRQPGVQVDLGRRFGTQDAWGIRFNTVLRRGEASIAGGRQDAGAGALALDYRGRGWR 328 Query: 245 LSADLGLQENNLSNVRPSVTIGAGLTSLPAAPSGSANYGQPWSYSNARDLFGTVRGEWDL 304 S D Q N S+ RP V G+T+LPA PSG ++ S D T R E +L Sbjct: 329 WSLDAYRQRENSSDFRPQVGFLPGVTALPAPPSGDLDFFSGNQLSFQDDALLT-RVEVEL 387 Query: 305 SSSTTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVATGEVGVRTHLQT 364 S +A+AA G R+ +L V + G+ +D A + + + G+R T Sbjct: 388 SEQLSAYAAVGQRRSATQQNLPTGSVDASGAGSVRNAYYDTASR--TLSADAGLRLQAAT 445 Query: 365 GAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLADPQTTIK 424 GAV H + + + NAY +S + A +LY P L + + +P+ Sbjct: 446 GAVRHGVSLGVTRLRQQAGNAYLVSADSS-AYSLYAPAT-----LPVISAARTEPRKAYD 499 Query: 425 TNLLSAVVSDTLGFYDDRLLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMAGVVFK 484 L S ++DTL +DRL + VG R+Q ++ D++ + A + Y+ SA SP+ G+V K Sbjct: 500 MTLDSLSLTDTLRLLEDRLQLLVGARRQSVRYDSFDTVSGAQLSSYEASAISPLLGLVVK 559 Query: 485 LTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGLGAAFFT 544 LS+Y N GL +G I T AN GQVLAPY+S+Q E G K + G + AA+F Sbjct: 560 PVAGLSLYANTTSGLTRGT-IVPTGLANAGQVLAPYRSRQLEAGAKLDWGRVMTQAAWFQ 618 Query: 545 TDRPLSYKDAVTNIEAA---------NGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQ 595 D P AV +A+ +G+QRNRG+EL+AYGE+ +G+RLL+ TF A+ Sbjct: 619 IDNP----SAVITTQASTPASSSYGYDGRQRNRGLELSAYGELMRGLRLLASATFYQARL 674 Query: 596 VQTNSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSPQYVDAANQLEVPSW 655 ++T + N+G+ A GVP AN L+ + G+ GL +GR +T P Y DAAN L +PSW Sbjct: 675 LRTANGLNDGRTAPGVPLRAANLSLDWEPAGLPGLAFSGRMIHTGPVYYDAANTLRLPSW 734 Query: 656 VRYDLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVA 715 R+DLG RY + +G V R +++N+ N + W + Y+ PRT S+ V Sbjct: 735 TRWDLGVRYRSRLGERPVVWRLNVENLFNHSTW-----LLDKPYVTVAAPRTVLLSMQVD 789 Query: 716 F 716 + Sbjct: 790 W 790 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust. Identities = 272/718 (37%), Positives = 385/718 (53%), Gaps = 34/718 (4%) Query: 5 FLAPLPALAQ--ATAQDPQALPTVTVNASADASADGLPAEFAGGQVARGSRLGVLGNVDN 62 LA A AQ TAQD +LPTVTV +D GLPA +AGGQVARG LGVLG D Sbjct: 36 LLAAPAAFAQDSGTAQDA-SLPTVTVTGRSDT---GLPAAYAGGQVARGGGLGVLGTQDV 91 Query: 63 LDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSDDLMY 122 LD+P ++ YT + I + QA VGDV+ ++ VR T G G F +SY IRG + +D + Sbjct: 92 LDTPFSTLNYTVEGIKNLQARTVGDVITSEASVRNTNGDGGFGDSYQIRGLPVSVNDTGF 151 Query: 123 NGLFGILPRQYVASEMMERVEVLYGASAFLNGATPGDAGLGGTINIVPKRAANEPLTDLT 182 NGL+G++ +++ M+ERVEVL G + G P G IN+V KRA EP++ LT Sbjct: 152 NGLYGLVSLSRMSTAMLERVEVLKGPGTLMYGMGPAGGVGGA-INLVSKRAGEEPVSSLT 210 Query: 183 LGYESGNSQYAAL-DVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYRGN 241 Y G++Q D+ RRFG + G+R+NA G T VA+ R++ ++ SL +DY G Sbjct: 211 ATY-VGSAQLGLQGDIGRRFGQDKEWGIRVNALYADGRTSVADNRQQQSMGSLALDYTGR 269 Query: 242 DFRLSADLGLQENNLSNVRPSVTIGAGLTSLPAAPSGSANYGQPWSYSNARDLFGTVRGE 301 R + D Q + N RP +IG TS+P+AP+G +N P + D R E Sbjct: 270 KLRWTLDAYTQHEDTRNFRPQFSIGT--TSMPSAPAGDSNL-YPGNTLQIDDKVVATRLE 326 Query: 302 WDLSSSTTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVAT-GEVGVRT 360 +DL+ TA+ A G +G S +T A + R Q V+T +VG+R Sbjct: 327 YDLTEQLTAYGAIGYHEGATAQSFPSATITGLD--GATSVRNGYYDQKVVSTSADVGLRA 384 Query: 361 HLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLADPQ 420 TG V H L AA+ + Y ++ + +A+NLY P A P + G L PQ Sbjct: 385 RFATGPVQHTLSMAANTLDQQTSYFYFVNAT-GVASNLYQPAPLA-PVTAARGEPL--PQ 440 Query: 421 TTIKTNLLSAVVSDTLGFYDDRLLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMAG 480 + +T L ++DTL D RLL+T G+R+QQ+ S++++ + +N Y SP+ G Sbjct: 441 S--QTRLSGLALTDTLSIADGRLLLTGGLRRQQVYSNSFSTRSSSNKIGY-----SPVLG 493 Query: 481 VVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGLGA 540 VV K + LS+Y NY GL G AN GQ APYK+KQ E GVK + G + A Sbjct: 494 VVVKPLENLSLYANYTAGLSAGG-FAGAQYANAGQAFAPYKTKQYESGVKLDWGRVTTTA 552 Query: 541 AFFTTDRPLSYKDAV--TNIEAANGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQT 598 A F +R S V +G+ R RG+EL+AYGE +G+RL++ TF + +Q T Sbjct: 553 AVFQIERANSSTAVVGSQTFATQDGRARVRGLELSAYGEAQRGLRLMASGTFFETRQSHT 612 Query: 599 NSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSPQYVDAANQLEVPSWVRY 658 N+GK VP+ N G + D P ++GL LN R T + AN ++VP W R Sbjct: 613 VGGTNDGKEIGAVPKHNFNLGADWDTPWLQGLALNTRIINTGASWYSDANTVKVPGWTRM 672 Query: 659 DLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 716 DLGARY + +GG +T RA+++N+ +++YW +GY G RT S V F Sbjct: 673 DLGARYTSRLGGQTITYRANLENLFDKHYW-----IMQNGYAGYGAGRTLVLSAQVDF 725 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 189 bits (479), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 206/737 (27%), Positives = 325/737 (44%), Gaps = 64/737 (8%) Query: 9 LPALAQAT------AQDPQALPTVTVNASADASADGLPAEFAGGQVARGSRLGVLGNVDN 62 LPA+ +A QD Q+LPT+ V AS A G AR + + + Sbjct: 22 LPAVTRAADTSDNQGQD-QSLPTINVTASG-----------ATGTQARSASVAGFDDAPL 69 Query: 63 LDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIAN-SDDLM 121 LD+P T + DQQ+ + DV+KND + + E++ IRGF + + Sbjct: 70 LDTPASVSVVTSAQMKDQQSRLLSDVVKNDASINENYAPVGYYENFSIRGFTLDPASAYR 129 Query: 122 YNGLFGILPRQYVASEMMERVEVLYGASAFLNGATPGDAGLGGTINIVPKRAANEPLTDL 181 NGL + Q +A E ERVE L G + G G GG +N V KR AN + + Sbjct: 130 VNGL-TVAGEQTIALENKERVEFLKGVA----GLQAGVVAAGGLVNYVTKRPAN--VRSI 182 Query: 182 TLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYRGN 241 TLG +S S+Y A D+ FG ++ G+RINAA + V+N + SL + + Sbjct: 183 TLGTDSNGSRYLATDLGALFGEHKQFGLRINAAHEDIHSYVSNGDGWRDFASLSATWAIS 242 Query: 242 DFRL-SADLGLQENNLSNVRPSVTIGAGLTSLPAAPSGSANYG-QPWSYSNARD--LFGT 297 L D Q+ +V +G +LP+ S S QPWS RD + Sbjct: 243 ARTLVQFDAEYQQKAQRSVAGYQLLGGA--TLPSGVSPSTMLTPQPWS-QPVRDSSVNAR 299 Query: 298 VRGEWDLSSSTTAWAAFGARQGTENNSLS-------GVRVTNASTGAAATYRF----DNA 346 +R + + ++ + G + ++ L+ G T A+ G Y + D Sbjct: 300 LRIDTEFNADWRGYVQAGRSRAVIDDYLAFPYGSGNGASPTFAANGDFDVYDYRVPNDER 359 Query: 347 RQDDVATGEVGVRTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQ 406 R D+V +G +G V H+L + + G+S N+YN T Sbjct: 360 RNDEVQAVAIG---KFASGWVQHELTLGMAMSRRIVDKSDGISVLVGQG-NIYNGT---- 411 Query: 407 PALTSLGNSLADPQTTIKTNLLSAVVSDTLGFYDDRLLVTVGVRQQQLKSDTYAYNTQAN 466 P L + + + + + SD + F R V G RQ L ++ +T A Sbjct: 412 PVLPAANAVIPAAYRNLDSRQKALFFSDRMQF-SQRWQVLAGGRQVWLNEQSFN-STGAV 469 Query: 467 TAHYDQSATSPMAGVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKE 526 T ++ P ++FK + LS+YG+Y E L G +N+ L P ++Q E Sbjct: 470 TRDTSRNLFLPQLALIFKPVQNLSLYGSYAETLSLGSS-APFWVSNFPVTLPPSVARQLE 528 Query: 527 VGVKYELG-GLGLGAAFFTTDRPLSYKD------AVTNIEAANGKQRNRGVELTAYGEVT 579 GVKYE L L AA F T + Y+ T ++ G+Q N GVEL A G++T Sbjct: 529 AGVKYEFSPELALTAAVFRTRKAYEYQKPDNSPTGFTYVQ--QGQQTNTGVELGANGKLT 586 Query: 580 KGVRLLSGLTFLDAKQVQTNSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYT 639 + + + T L A+ T ++ + + + VPR++ + VPG+ G+ + G Y+ Sbjct: 587 PRLAIGAAATVLRARASDTGTARFDDQQVVNVPRLRTAVYADYAVPGMEGVNVMGSWNYS 646 Query: 640 SPQYVDAANQLEVPSWVRYDLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGY 699 + + + +P+ ++ G RY + GHA TLRA+IDN+ ++ YW+ AG GY Sbjct: 647 ASKPATRDGSVNLPAVHVFNAGLRYQLRVNGHAATLRANIDNLFDKRYWKDAGQYLGDGY 706 Query: 700 LVAGNPRTFSTSVSVAF 716 + G PRT S+ F Sbjct: 707 VHLGAPRTARLSLQYDF 723 >gi|300313664|ref|YP_003777756.1| tonB-dependent receptor for iron transport protein [Herbaspirillum seropedicae SmR1] Length = 798 Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 186/738 (25%), Positives = 296/738 (40%), Gaps = 113/738 (15%) Query: 63 LDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGN--FQESYMIRGFIANSDDL 120 LD P ++++ Q A + D+LKN P + T G GN + + + IRGF ++ L Sbjct: 90 LDLPQSITVVPKEVLTQQNAQNLQDILKNVPGITFTSGEGNLGWGDMFTIRGF-SSEQSL 148 Query: 121 MYNGL--FGILPRQYVASEMMERVEVLYGASAFLNGATPGDAGLGGTINIVPKRAANEPL 178 +G+ G+ R + +E+VEV G + +G + +GG++N+V K A + Sbjct: 149 TVDGVRDAGMSSRNDTFN--LEQVEVFKGTGSIESGVS----AIGGSVNLVSKEARLDDF 202 Query: 179 TDLTLGYESGNSQYAALDVSRRFGPQERLGVRINAAR---HAGGTGVANERRETNLFSLG 235 + + G S D++ + L R+N + H V R+ SLG Sbjct: 203 YNTSFGVGSAGYTRFTADLNHQLDATSAL--RLNLMKQQNHVAERDVVKYDRQGIAASLG 260 Query: 236 VDYRGNDFRLSADLGLQ-ENNLSNVRPSVTIGAGLTSLPAAPSGSANYGQPWSYSNARDL 294 + G R+ D+ Q ++N+ + + G G + +P S +A YG Sbjct: 261 LGL-GTRTRIFFDVFHQDDDNIPDTGLPIQRGTGGSVMPYV-SRNAWYGSTTYTQQTTTD 318 Query: 295 FGTVRGEWDLSSST-----TAW-----------AAF------GARQGTE-----NNSL-- 325 T R E D S + T W A F GA GT + SL Sbjct: 319 ALTARVEHDFSDAVKIRNQTRWERADNLSVLSPARFNAANSAGASLGTSLGYAGSGSLTA 378 Query: 326 -SGVRVTNASTGAAATY------RFDNARQDDVATGEVGVRTHLQTGAVSHKLVAAASAY 378 SG+ + T A Y F +++ + + + TGA+ H+L Y Sbjct: 379 ASGILSYSDFTNTANRYGVLRGNDFGTSKRYTILDNQSDLSLKFDTGAIRHELSTGVDLY 438 Query: 379 SLNSRNAYG------LSPSYALATNLYNPTNYAQPALTSLGNSLADPQTTIKTNLLSAVV 432 R YG +PS AL ++ NPT + T G + + + T V Sbjct: 439 ----RETYGDLPRTVATPSGALGFDMSNPTVSSASVATLKGGAGLESRVTNA----GLYV 490 Query: 433 SDTLGFYDDRLLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMAGVVFKLTKTLSVY 492 +DT+ F +T +R + K+ T A TA A S G+V+K + S+Y Sbjct: 491 ADTMKFSPQWQFLTA-LRYDRWKAVTSTRG--ATTASSSAGALSGRLGLVYKPLENASLY 547 Query: 493 GNYIEGLQQGKQITDTTAANYG----QVLAPYKSKQKEVGVKYEL--GGLGLGAAFFTTD 546 Y Q T A YG +P +K +E+G K+++ L L A F T+ Sbjct: 548 LTYARAAQPSALGATTNNAIYGSASASAYSPAVAKTRELGGKWDVLNKRLALTGAVFRTE 607 Query: 547 --RPLSYKDAVTNIEAANGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQTNSSANN 604 Y D T+ A +R GVEL G +T + GLT L +KQ + AN Sbjct: 608 VTDSWEYGDDETSPVRALPAKRVDGVELGVQGNLTDAWSVFGGLTRLKSKQTK---GANA 664 Query: 605 GKYAIGVPRVQANAGLEVDV-PGV---RGLTLNGRATYTSPQYVDAAN------------ 648 G A VP N + PG+ G G+ Y+ +YV N Sbjct: 665 GSEAKNVPDWTLNLWTSYEAKPGLFFSYGAQYVGKRRYSDNKYVGGLNNSSSTVSGPSGT 724 Query: 649 -------QLEVPSWVRYDLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLV 701 Q + P++ + L AR+ D + L ++DN+ N+ YW S G+S G+ + Sbjct: 725 RPVYVLDQEKAPAYWLHSLAARWRVD---RRLALNFNVDNLFNKFYW-SRIGSSLDGFQL 780 Query: 702 AGNP---RTFSTSVSVAF 716 G P RT++ S ++F Sbjct: 781 YGVPGAGRTYTLSADISF 798 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.313 0.130 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,182,668 Number of extensions: 94827 Number of successful extensions: 315 Number of sequences better than 1.0e-08: 14 Number of HSP's gapped: 283 Number of HSP's successfully gapped: 14 Length of query: 716 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 624 Effective length of database: 1,184,250 Effective search space: 738972000 Effective search space used: 738972000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)