BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0058.p
         (663 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI prote...  1277   0.0  

>gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI protein
           [Herbaspirillum seropedicae SmR1]
          Length = 663

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/663 (98%), Positives = 657/663 (99%)

Query: 1   MTALPVYPFSAIVGQPLLQQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIAR 60
           MTALPVYPFSAIVGQPLLQQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIAR
Sbjct: 1   MTALPVYPFSAIVGQPLLQQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIAR 60

Query: 61  VAGCAFNCAPGQPAAACTLCNGDNTPAAAPADLPFVTLPLGATEDRVLGSLDLQQALQGG 120
           VA CAFNCAPGQPAAACTLCNGDN PAAAPADLPFVTLPLGATEDRVLGSLDLQQALQGG
Sbjct: 61  VAACAFNCAPGQPAAACTLCNGDNAPAAAPADLPFVTLPLGATEDRVLGSLDLQQALQGG 120

Query: 121 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGINAVQREGLSVSHPARFTLI 180
           QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGINAVQREGLSVSHPARFTLI
Sbjct: 121 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGINAVQREGLSVSHPARFTLI 180

Query: 181 GTMNLEEGDLRPQLLDRFGLMVEVNAPTDKTVRAEVVRRRIAFEADPAAFASQWQDRQDA 240
           GTMNLEEGDLRPQLLDRFGLMVEVNAPTDKTVRAEVVRRRIAFEADPAAFASQWQDRQDA
Sbjct: 181 GTMNLEEGDLRPQLLDRFGLMVEVNAPTDKTVRAEVVRRRIAFEADPAAFASQWQDRQDA 240

Query: 241 LRSQVAQAQRLLPEVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARSRVR 300
           LR+QVAQAQRLLPEVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARSRV 
Sbjct: 241 LRNQVAQAQRLLPEVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARSRVT 300

Query: 301 PDDVREAALLVLPHRRRRKPFEQTGMDQDKLDELVDQARPPEPPAPDAGPGSGEAPPQEP 360
           PDDVREAALLVLPHRRRRKPFEQTGMDQDKLD+L+DQAR PEPPAPDAG GSGEAPPQEP
Sbjct: 301 PDDVREAALLVLPHRRRRKPFEQTGMDQDKLDDLIDQARTPEPPAPDAGEGSGEAPPQEP 360

Query: 361 SPEQEQPEEGEQDQQDQPSEAGGQQTFAIAAAGQARKISVAAPAQASVASGRRSAVADAS 420
           SPEQEQPEEGEQDQQDQPSEAGGQQTFAIAAAGQARKISVAAPAQAS ASGRRSAVADAS
Sbjct: 361 SPEQEQPEEGEQDQQDQPSEAGGQQTFAIAAAGQARKISVAAPAQASAASGRRSAVADAS 420

Query: 421 RGSAVRAVPDANPDRLAIGATLRSAAVRSALSGEAEPGERLAVSRADLHRQVRSGRGANL 480
           RGSAVRAVPDANPDRLAIGATLRSAAVRSALSGEAEPGERLAVSRADLHRQVRSGRGANL
Sbjct: 421 RGSAVRAVPDANPDRLAIGATLRSAAVRSALSGEAEPGERLAVSRADLHRQVRSGRGANL 480

Query: 481 IVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLLLAPTRSADL 540
           IVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLLLAPTRSADL
Sbjct: 481 IVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLLLAPTRSADL 540

Query: 541 AEQGLRELPTGGRTPLPHALQLAAQVLQQASPEAPPLLVILSDGKANVSLPGSHGDAWAQ 600
           AEQGLRELPTGGRTPLPHALQLAAQVLQQASPEAPPLLVILSDGKANVSLPGSHGDAWAQ
Sbjct: 541 AEQGLRELPTGGRTPLPHALQLAAQVLQQASPEAPPLLVILSDGKANVSLPGSHGDAWAQ 600

Query: 601 TLEAADMLAAQAVPALVLDTESGYLRLGRAAQLAEALGAPCLTLEQLTGDALALTVRAQL 660
           TLEAADMLAAQAVPALVLDTESGYLRLGRAAQLAEALGAPCLTLEQLTGDALALTVRAQL
Sbjct: 601 TLEAADMLAAQAVPALVLDTESGYLRLGRAAQLAEALGAPCLTLEQLTGDALALTVRAQL 660

Query: 661 GAR 663
           GAR
Sbjct: 661 GAR 663


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.317    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,800,711
Number of extensions: 71300
Number of successful extensions: 385
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 385
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 572
Effective length of database: 1,188,985
Effective search space: 680099420
Effective search space used: 680099420
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 134 (56.2 bits)