BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0116.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0731 [R] COG0824 Predicted thioesterase Rso Ralstonia solanac...   166   2e-41
VC1840 [R] COG0824 Predicted thioesterase Vch Vibrio cholerae         124   1e-28
PA0968 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...   117   1e-26
ybgC [R] COG0824 Predicted thioesterase Eco Escherichia coli K12      110   8e-25
ZybgC [R] COG0824 Predicted thioesterase EcZ Escherichia coli O1...   110   8e-25

>RSc0731 [R] COG0824 Predicted thioesterase Rso Ralstonia solanacearum
          Length = 134

 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/147 (59%), Positives = 104/147 (70%), Gaps = 15/147 (10%)

Query: 6   SPFDWKIRVYYEDTDTGGVVFYANYLKFFERARTEWLRSFGFQQQHLAETTGAIFVVKNT 65
           S FDW +RVY+EDTD GGVVFYANYLKFFERARTEWLR+ G  QQ LA+TTGAIFVV++T
Sbjct: 2   SSFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRST 61

Query: 66  SVDYLSPARLDDELRLTVVVEKFRNASMQFIQEAWRLPSGDGSGSAGPDGSAPRLLARGS 125
           +VDY +PARLDD L++   +E+   AS+QF QE+WR   GD             LL  G+
Sbjct: 62  AVDYRAPARLDDLLQVRSRMERVGPASVQFAQESWR---GD------------ILLVSGT 106

Query: 126 ITVVCVDQATFRPRPIPDELLNRIKKA 152
           I V CVD+ TFRP PIP  +L  IK A
Sbjct: 107 IRVGCVDRLTFRPTPIPAPILATIKAA 133


>VC1840 [R] COG0824 Predicted thioesterase Vch Vibrio cholerae
          Length = 155

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 15/137 (10%)

Query: 6   SPFDWKIRVYYEDTDTGGVVFYANYLKFFERARTEWLRSFGFQQQHLAETTGAIFVVKNT 65
           + F W + VYYEDTD GGVV++ANYLKFFERARTE LR+ G  QQ L E  G  FVV++ 
Sbjct: 22  NTFHWPVTVYYEDTDAGGVVYHANYLKFFERARTEMLRAVGVHQQSLLE-QGIGFVVRHM 80

Query: 66  SVDYLSPARLDDELRLTVVVEKFRNASMQFIQEAWRLPSGDGSGSAGPDGSAPRLLARGS 125
            +D+L  A+LDD L +   V + + AS+ F QE              P+G+   +L++  
Sbjct: 81  EIDFLKGAKLDDHLEVVTRVSELKKASLTFCQEL-----------VNPEGT---VLSKAK 126

Query: 126 ITVVCVDQATFRPRPIP 142
           + V C+D  + RPR +P
Sbjct: 127 VKVACIDNESMRPRALP 143


>PA0968 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 148

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 78/139 (56%), Gaps = 14/139 (10%)

Query: 7   PFDWKIRVYYEDTDTGGVVFYANYLKFFERARTEWLRSFGFQQQHLAETTGAIFVVKNTS 66
           PF  + RVYYEDTD GG+V+Y NYLKF ERARTE LR+ GF Q  L      +FVV +  
Sbjct: 9   PFQQRFRVYYEDTDAGGIVYYVNYLKFMERARTERLRALGFAQSQLV-GDNLLFVVHSAE 67

Query: 67  VDYLSPARLDDELRLTVVVEKFRNASMQFIQEAWRLPSGDGSGSAGPDGSAPRLLARGSI 126
             Y +PA+LDDEL ++  VE+   AS++F Q+  R              S   LL  G  
Sbjct: 68  ARYHAPAKLDDELLVSAEVEELNRASLKFRQQVRR-------------ASDSVLLCEGRF 114

Query: 127 TVVCVDQATFRPRPIPDEL 145
            V CV   T +PR IP+ L
Sbjct: 115 LVACVRADTLKPRAIPETL 133


>ybgC [R] COG0824 Predicted thioesterase Eco Escherichia coli K12
          Length = 134

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 15/147 (10%)

Query: 5   SSPFDWKIRVYYEDTDTGGVVFYANYLKFFERARTEWLRSFGFQQQHLAETTGAIFVVKN 64
           ++ F W +RVYYEDTD GGVV++A+Y+ F+ERARTE LR   F QQ L     A FVV+ 
Sbjct: 3   TTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVA-FVVRK 61

Query: 65  TSVDYLSPARLDDELRLTVVVEKFRNASMQFIQEAWRLPSGDGSGSAGPDGSAPRLLARG 124
            +V+Y +PARLDD L +   +   R  S+ F Q   R+ + + +           LL   
Sbjct: 62  MTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQ---RIVNAENT-----------LLNEA 107

Query: 125 SITVVCVDQATFRPRPIPDELLNRIKK 151
            + VVCVD    +PR +P  ++   K+
Sbjct: 108 EVLVVCVDPLKMKPRALPKSIVAEFKQ 134


>ZybgC [R] COG0824 Predicted thioesterase EcZ Escherichia coli O157:H7
           EDL933
          Length = 134

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 15/147 (10%)

Query: 5   SSPFDWKIRVYYEDTDTGGVVFYANYLKFFERARTEWLRSFGFQQQHLAETTGAIFVVKN 64
           ++ F W +RVYYEDTD GGVV++A+Y+ F+ERARTE LR   F QQ L     A FVV+ 
Sbjct: 3   TTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVA-FVVRK 61

Query: 65  TSVDYLSPARLDDELRLTVVVEKFRNASMQFIQEAWRLPSGDGSGSAGPDGSAPRLLARG 124
            +V+Y +PARLDD L +   +   R  S+ F Q   R+ + + +           LL   
Sbjct: 62  MTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQ---RIVNAENT-----------LLNEA 107

Query: 125 SITVVCVDQATFRPRPIPDELLNRIKK 151
            + VVCVD    +PR +P  ++   K+
Sbjct: 108 EVLVVCVDPLKMKPRALPKSIVAEFKQ 134