BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0107.p (338 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2712 [J] COG0809 S-adenosylmethionine Rso Ralstonia solanacearum 491 e-139 VC0739 [J] COG0809 S-adenosylmethionine Vch Vibrio cholerae 405 e-113 NMB1859 [J] COG0809 S-adenosylmethionine Nme Neisseria meningiti... 387 e-107 PA3824 [J] COG0809 S-adenosylmethionine Pae Pseudomonas aeruginosa 382 e-106 NMA0599 [J] COG0809 S-adenosylmethionine NmA Neisseria meningiti... 380 e-105 >RSc2712 [J] COG0809 S-adenosylmethionine Rso Ralstonia solanacearum Length = 362 Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust. Identities = 242/342 (70%), Positives = 282/342 (82%), Gaps = 5/342 (1%) Query: 1 MYSLSDFDFELPPELIAQTPLAERSASRLL----QVQGAQLTDRRFSDIVELLQPGDLLV 56 M +LSDFDF+LPPELIAQT L +R+ASRLL QG DR+F+D+V+ L+PGDLLV Sbjct: 7 MLTLSDFDFDLPPELIAQTALPDRTASRLLAARHDAQGTHFDDRQFADLVDYLRPGDLLV 66 Query: 57 FNDTRVIKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADAFDVTV 116 FNDTRVIKAR FG K +GGKIE LVER+LD TV AQ+R+SKSP G+ +RLADAFDVTV Sbjct: 67 FNDTRVIKARFFGHKASGGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADAFDVTV 126 Query: 117 GERFGEFFTLHFPADAFELLEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTA 176 G R FFTL FP A EL+EQYG LPLPPYI+H D++DETRYQTVYA+ PGAVAAPTA Sbjct: 127 GPRHEPFFTLRFPQPALELIEQYGRLPLPPYIEHTPDSFDETRYQTVYARTPGAVAAPTA 186 Query: 177 GLHFDEALLQQLAARGVKQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTISPETVEAVR 236 GLHFD+AL +L A GV++ F+TLHVGAGTF PVRVE++++H+MHSEWY ISP+ EA+R Sbjct: 187 GLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHSEWYAISPDLAEAIR 246 Query: 237 ATKAAGGRVIAVGTTSMRALESGSQ-SGQLQAGSDDTQLFITPGYTFKTVDQLVTNFHLP 295 AT+A GGR++AVGTTSMRALES +Q G L AGS +T +FITPGY F+ VD LVTNFHLP Sbjct: 247 ATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYRFRLVDALVTNFHLP 306 Query: 296 KSTLLMLVSAFAGYEHIRAAYAHAIAQQYRFFSYGDAMLLTR 337 KSTLLMLVSAFAG E IRAAY HAIAQ+YRFFSYGDAM LTR Sbjct: 307 KSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 348 >VC0739 [J] COG0809 S-adenosylmethionine Vch Vibrio cholerae Length = 352 Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust. Identities = 203/346 (58%), Positives = 259/346 (74%), Gaps = 13/346 (3%) Query: 4 LSDFDFELPPELIAQTPLAERSASRLLQVQG--AQLTDRRFSDIVELLQPGDLLVFNDTR 61 +SDF FELP ELIA+ P AER+ASRLLQ+ G QL D F D++EL++PGDLLVFN+TR Sbjct: 3 VSDFHFELPDELIARYPKAERTASRLLQLDGNSGQLVDGTFKDVLELVEPGDLLVFNNTR 62 Query: 62 VIKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLA--DAFDVTVGER 119 VI AR+FG K +GGK+E LVER+LD T+ A VR+SK P PGT + L D F + R Sbjct: 63 VIPARMFGRKASGGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGENDEFHAVMQAR 122 Query: 120 FGEFFTLHFPAD--AFELLEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTAG 177 F + F A+ ++L Q G +PLPPYID + D+ RYQTVY ++PGAVAAPTAG Sbjct: 123 HDALFEIRFTAETVVLDILNQIGHMPLPPYIDRPDEEADKERYQTVYNQKPGAVAAPTAG 182 Query: 178 LHFDEALLQQLAARGVKQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTISPETVEAVRA 237 LHFD+ALL+Q+ A+GV+ A+VTLHVGAGTFQPVRVE++ H MH+E+ + E V+A+ A Sbjct: 183 LHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHMHAEYVEVPQEVVDAITA 242 Query: 238 TKAAGGRVIAVGTTSMRALESGSQSGQLQAGSD------DTQLFITPGYTFKTVDQLVTN 291 TKA GGRV+AVGTTS+R+LES +Q LQ G++ DT++FI PGY ++ VD L+TN Sbjct: 243 TKARGGRVVAVGTTSVRSLESAAQDA-LQKGTELKPFFGDTEIFIFPGYQYQLVDCLITN 301 Query: 292 FHLPKSTLLMLVSAFAGYEHIRAAYAHAIAQQYRFFSYGDAMLLTR 337 FHLP+STL+MLVSAFAGYEH AAY HA+ +QYRFFSYGDAM + + Sbjct: 302 FHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFIRK 347 >NMB1859 [J] COG0809 S-adenosylmethionine Nme Neisseria meningitidis MC58 Length = 346 Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust. Identities = 207/340 (60%), Positives = 251/340 (73%), Gaps = 6/340 (1%) Query: 4 LSDFDFELPPELIAQTPLAERSASRLL-QVQGAQLTDRRFSDIVELLQPGDLLVFNDTRV 62 +SDFDF LP +LIAQ P R +SRLL + L DR F D+ + ++ GD+LVFN+T+V Sbjct: 3 ISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGDLPDYVEAGDVLVFNNTKV 62 Query: 63 IKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADAFD-VTVGERFG 121 +KARLFG K++GG+IEAL+ER+LD T A +R+SKSP PG + VTVG R G Sbjct: 63 MKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVFEGGIRAVTVG-REG 121 Query: 122 EFFTLHFPAD--AFELLEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTAGLH 179 E F L F +ELLEQ G LPLPPYI+ ADA D++RYQTVYAK GAVAAPTAGLH Sbjct: 122 ELFCLRFEGGETVYELLEQNGHLPLPPYIERAADADDDSRYQTVYAKYQGAVAAPTAGLH 181 Query: 180 FDEALLQQLAARGVKQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTISPETVEAVRATK 239 F E LL +L +G A VTLHVGAGTFQPVRV+ + +HKMHSEW+ + ET AV A K Sbjct: 182 FTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKMHSEWFEVPSETAAAVEAAK 241 Query: 240 AAGGRVIAVGTTSMRALESGSQ-SGQLQAGSDDTQLFITPGYTFKTVDQLVTNFHLPKST 298 A G +V AVGTTSMRALES ++ +G+L+AG DT +FITPGY F VD+LVTNFHLPKST Sbjct: 242 ARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPGYRFNVVDRLVTNFHLPKST 301 Query: 299 LLMLVSAFAGYEHIRAAYAHAIAQQYRFFSYGDAMLLTRT 338 LLMLVSAF+G HIRAAY HA+ ++YRFFSYGDAM+L R Sbjct: 302 LLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGRN 341 >PA3824 [J] COG0809 S-adenosylmethionine Pae Pseudomonas aeruginosa Length = 347 Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/337 (59%), Positives = 244/337 (72%), Gaps = 2/337 (0%) Query: 4 LSDFDFELPPELIAQTPLAERSASRLLQVQG--AQLTDRRFSDIVELLQPGDLLVFNDTR 61 ++DF F+LP LIA+ PL ER ASRLL + G L R+F+D+++ L+PGDL+VFN+TR Sbjct: 3 VADFHFDLPEALIARHPLPERRASRLLALDGPTGTLAHRQFADLLDYLRPGDLMVFNNTR 62 Query: 62 VIKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADAFDVTVGERFG 121 VI ARLFG KE+GGK+E LVER+LD V A +RASK+P PGTRI + + +R Sbjct: 63 VIPARLFGQKESGGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILVEGGGSAEMLQRHD 122 Query: 122 EFFTLHFPADAFELLEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTAGLHFD 181 F L F LLE+ G +PLPPYID DA D RYQTVYA+ GAVAAPTAGLHFD Sbjct: 123 ALFELAFAEPVLPLLERVGHMPLPPYIDRPDDAADRERYQTVYAQRAGAVAAPTAGLHFD 182 Query: 182 EALLQQLAARGVKQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTISPETVEAVRATKAA 241 EALL+ + A+GV AFVTLHVGAGTFQPVRVE + H MH EW + + V+AV +A Sbjct: 183 EALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVMHREWLEVGQDVVDAVSVCRAR 242 Query: 242 GGRVIAVGTTSMRALESGSQSGQLQAGSDDTQLFITPGYTFKTVDQLVTNFHLPKSTLLM 301 GGRV+AVGTTS+R+LES ++ G+L+ S DT +FI PG F VD LVTNFHLP+STLLM Sbjct: 243 GGRVVAVGTTSVRSLESAARDGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLM 302 Query: 302 LVSAFAGYEHIRAAYAHAIAQQYRFFSYGDAMLLTRT 338 LVSAFAGY AAYA A+AQ YRFFSYGDAM +TR Sbjct: 303 LVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITRN 339 >NMA0599 [J] COG0809 S-adenosylmethionine NmA Neisseria meningitidis Z2491 Length = 346 Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/339 (58%), Positives = 246/339 (72%), Gaps = 4/339 (1%) Query: 4 LSDFDFELPPELIAQTPLAERSASRLL-QVQGAQLTDRRFSDIVELLQPGDLLVFNDTRV 62 +SDFDF LP LIAQ P R +S LL + L DR F D+ + ++ GD+LVFN+T+V Sbjct: 3 ISDFDFTLPEHLIAQHPPEVRGSSHLLVALPDMPLQDRVFGDLPDYVEAGDVLVFNNTKV 62 Query: 63 IKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADAFDVTVGERFGE 122 +KARLFG K++GG+IEAL+ER+LD T A +R+SKSP PG + + R GE Sbjct: 63 MKARLFGQKDSGGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVFEGGIRAVMVGREGE 122 Query: 123 FFTLHFPAD--AFELLEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTAGLHF 180 F L F +ELLEQ G LPLPPYI+ ADA D++RYQTVYAK GAVAAPTAGLHF Sbjct: 123 LFCLRFEGGETVYELLEQNGHLPLPPYIERAADADDDSRYQTVYAKYQGAVAAPTAGLHF 182 Query: 181 DEALLQQLAARGVKQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTISPETVEAVRATKA 240 E LL++L +G A VTLHVGAGTFQPVRV+ + +HKMHSEW+ + ET AV A KA Sbjct: 183 TEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKMHSEWFEVPSETAAAVEAAKA 242 Query: 241 AGGRVIAVGTTSMRALESGSQ-SGQLQAGSDDTQLFITPGYTFKTVDQLVTNFHLPKSTL 299 G +V AVGTTSMRALES ++ +G+L+AG DT +FITPGY F D+LVTNFHLPKSTL Sbjct: 243 RGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPGYRFNVADRLVTNFHLPKSTL 302 Query: 300 LMLVSAFAGYEHIRAAYAHAIAQQYRFFSYGDAMLLTRT 338 LMLVSAF+G HIRAAY +A+ ++YRFFSYGDAM+L R Sbjct: 303 LMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRN 341