BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0053.p         (266 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0765 [E] COG2008 Threonine aldolase Vch Vibrio cholerae            232   6e-61
PA0902 [E] COG2008 Threonine aldolase Pae Pseudomonas aeruginosa      218   1e-56
STM0934 [E] COG2008 Threonine aldolase Sty Salmonella typhimuriu...   216   4e-56
ybjU [E] COG2008 Threonine aldolase Eco Escherichia coli K12          215   7e-56
ECs0956 [E] COG2008 Threonine aldolase Ecs Escherichia coli O157:H7   214   2e-55

>VCA0765 [E] COG2008 Threonine aldolase Vch Vibrio cholerae
          Length = 343

 Score =  232 bits (592), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 106/175 (60%), Positives = 135/175 (77%)

Query: 29  DFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQSN 88
           DFRSDTVTQP+ AM+QAM +AP+GDDV G+DPTVN L+  AA   GFEA LF  SGTQ+N
Sbjct: 10  DFRSDTVTQPTDAMRQAMAQAPVGDDVYGDDPTVNELEQWAAERHGFEAALFTTSGTQAN 69

Query: 89  LIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVIKP 148
           L+ ++ HC RGDE + GQQ H YR+EAGG AVLGS+QPQP++ +PDGTL    ++A IKP
Sbjct: 70  LLGLLAHCERGDEYLCGQQAHNYRYEAGGAAVLGSIQPQPIDNEPDGTLDFAKLKAAIKP 129

Query: 149 DDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVAL 203
           DD HFART+L+ +ENT+ GK LPL+Y+ +      + GL+ H+DGAR+ NAAVAL
Sbjct: 130 DDAHFARTKLLSLENTINGKVLPLSYLAKAREFVDQHGLQLHLDGARVYNAAVAL 184


>PA0902 [E] COG2008 Threonine aldolase Pae Pseudomonas aeruginosa
          Length = 334

 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/175 (60%), Positives = 127/175 (72%)

Query: 29  DFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQSN 88
           D RSDTVTQP+  M++AM  A LGDDV GEDPTVN L+   A   GF A LF P+GT SN
Sbjct: 5   DLRSDTVTQPTAGMREAMAAAELGDDVYGEDPTVNRLEAELAARLGFAAALFVPTGTMSN 64

Query: 89  LIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVIKP 148
           L+ +M HC RGDE IVGQQ HTY++E GG AVLGS+QPQP++ + DG+L LD + A IK 
Sbjct: 65  LLGLMAHCERGDEYIVGQQAHTYKYEGGGAAVLGSIQPQPIDGEADGSLHLDKVAAAIKA 124

Query: 149 DDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVAL 203
           DD HFARTRL+ +ENT+ GK LPL Y+    A  + RGL  H+DGARL NAAV L
Sbjct: 125 DDFHFARTRLLALENTMQGKVLPLDYLAAARAFTRARGLALHLDGARLYNAAVKL 179


>STM0934 [E] COG2008 Threonine aldolase Sty Salmonella typhimurium LT2
          Length = 333

 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/176 (58%), Positives = 131/176 (74%)

Query: 27  MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 86
           M D RSDTVT+P  AM +AM+ AP+GDDV G+DPTVN LQ  AA + G EA LF P+GTQ
Sbjct: 1   MIDLRSDTVTRPGRAMLEAMMTAPVGDDVYGDDPTVNALQRYAADLSGKEAALFLPTGTQ 60

Query: 87  SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 146
           +NL+A+++HC RG+E IVGQ  H Y +EAGG AVLGS+QPQP++   DGTL L+++ A I
Sbjct: 61  ANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLENVAAKI 120

Query: 147 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVA 202
           K DD HFARTRL+ +ENT  GK LP AY+++     + RGL  H+DGAR+ NA VA
Sbjct: 121 KADDIHFARTRLLSLENTHNGKVLPRAYLKDAWTFTRERGLALHVDGARIFNAVVA 176


>ybjU [E] COG2008 Threonine aldolase Eco Escherichia coli K12
          Length = 333

 Score =  215 bits (548), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 102/176 (57%), Positives = 129/176 (73%)

Query: 27  MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 86
           M D RSDTVT+PS AM +AM+ AP+GDDV G+DPTVN LQ  AA + G EA +F P+GTQ
Sbjct: 1   MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQ 60

Query: 87  SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 146
           +NL+A+++HC RG+E IVGQ  H Y +EAGG AVLGS+QPQP++   DGTL LD +   I
Sbjct: 61  ANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI 120

Query: 147 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVA 202
           KPDD HFART+L+ +ENT  GK LP  Y++E     + R L  H+DGAR+ NA VA
Sbjct: 121 KPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVVA 176


>ECs0956 [E] COG2008 Threonine aldolase Ecs Escherichia coli O157:H7
          Length = 333

 Score =  214 bits (545), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/176 (57%), Positives = 129/176 (73%)

Query: 27  MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 86
           M D RSDTVT+PS AM +AM+ AP+GDDV G+DPTVN LQ  AA + G EA +F P+GTQ
Sbjct: 1   MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQ 60

Query: 87  SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 146
           +NL+A+++HC RG+E IVGQ  H Y +EAGG AVLGS+QPQP++   DGTL LD +   I
Sbjct: 61  ANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI 120

Query: 147 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVA 202
           KPDD HFART+L+ +ENT  GK LP  Y+++     + R L  H+DGAR+ NA VA
Sbjct: 121 KPDDIHFARTKLLSLENTHNGKVLPREYLKDAWEFTRERNLALHVDGARIFNAVVA 176