BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0049.p         (147 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF0240 [K] COG1733 Predicted transcriptional regulators Xfa Xyle...    83   2e-16
mlr2600 [K] COG1733 Predicted transcriptional regulators Mlo Mes...    82   5e-16
SMc01493 [K] COG1733 Predicted transcriptional regulators Sme Si...    78   5e-15
AGc1578 [K] COG1733 Predicted transcriptional regulators Atu Agr...    78   6e-15
mll2818 [K] COG1733 Predicted transcriptional regulators Mlo Mes...    77   9e-15

>XF0240 [K] COG1733 Predicted transcriptional regulators Xfa Xylella
           fastidiosa 9a5c
          Length = 142

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 1/104 (0%)

Query: 32  RDVLAHAGSRWALGILHALGVYGTLRHAELKRQLSGVTQRMLTKTLRALERDGLLLRHET 91
           RDVL H G +W+L IL  L V G  R + ++R +  +++RMLT+TLR LER+G++ R   
Sbjct: 27  RDVLDHIGDKWSLLILLTL-VPGPTRFSAIQRAVPDISKRMLTQTLRHLERNGMIGRTVY 85

Query: 92  DEKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQARRTFD 135
             KP RVEY L  LG+ LL+ +  +  W   H ++ R+AR  FD
Sbjct: 86  PTKPPRVEYALAPLGESLLVPVMHLLKWASTHHDEVRRARNRFD 129


>mlr2600 [K] COG1733 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 122

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 33  DVLAHAGSRWALGILHALGVYGTLRHAELKRQLSGVTQRMLTKTLRALERDGLLLRHETD 92
           ++L   G +W + ++  LG +G LR  EL+  + G++Q+MLT TLR LERDG + R    
Sbjct: 17  EILQRVGDKWTVLVVGKLG-HGPLRFNELRAAVGGISQKMLTTTLRGLERDGFVTRTVFP 75

Query: 93  EKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQARRTFDS 136
             P RV+YELT LG +LL+ +S +  W   + +  R+AR  FD 
Sbjct: 76  TIPPRVDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDG 119


>SMc01493 [K] COG1733 Predicted transcriptional regulators Sme Sinorhizobium
           meliloti
          Length = 156

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 19  ICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAELKRQLSGVTQRMLTKTLR 78
           +C    + D+   RDV+ + G +W   ++ +L   G LR ++L+R +  ++QRMLT+TLR
Sbjct: 16  VCGMPVDIDNCPVRDVMDNIGGKWNSLMILSLA-DGPLRFSQLRRLIPDISQRMLTQTLR 74

Query: 79  ALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQARRTFDSQD 138
            L+RDG L R     +P  VEY LT LG+  L  +     W +E+ +  RQAR  +D   
Sbjct: 75  DLQRDGYLRRTVYPTQPPSVEYSLTDLGRSFLAVLRVFVDWSLENHQAIRQARAEYDDAQ 134

Query: 139 KQQNIHR 145
           +    HR
Sbjct: 135 EADCRHR 141


>AGc1578 [K] COG1733 Predicted transcriptional regulators Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 143

 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 60/109 (55%)

Query: 32  RDVLAHAGSRWALGILHALGVYGTLRHAELKRQLSGVTQRMLTKTLRALERDGLLLRHET 91
           +D++A    +W + IL  L  +GT R  ++ + +  ++Q+MLTKTLR +E DGL+ R   
Sbjct: 31  QDIIAKVADKWTMLILEVLEEHGTQRFTQIGKHVGNISQKMLTKTLRQMESDGLVRRTVH 90

Query: 92  DEKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQARRTFDSQDKQ 140
              P  V+Y LT LG+ L      +W W   H  +  +ARR F+ Q  +
Sbjct: 91  PVIPPHVDYGLTTLGRTLGSAFCGVWIWAETHHAEIEEARRRFNEQPPR 139


>mll2818 [K] COG1733 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 132

 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 6/109 (5%)

Query: 28  DGVRRDVLAHA-----GSRWALGILHALGVYGTLRHAELKRQLSGVTQRMLTKTLRALER 82
           D  RR   +H       S+W   ++ AL   G LR+ EL R+L G+T +ML +TLR LER
Sbjct: 12  DAFRRTCPSHTVLEMLASKWVYLVVCALR-KGRLRNGELARKLEGITPKMLAQTLRVLER 70

Query: 83  DGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQAR 131
           DGL+ R      P RVEYELT LG++L   ++ I  W  +HA D + AR
Sbjct: 71  DGLVRREIFPVIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDAR 119