BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0021.p         (355 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3549 Non COG                                                        134   3e-31
PA3546 Non COG                                                         77   8e-14

>PA3549 Non COG
          Length = 391

 Score =  134 bits (337), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 158/326 (48%), Gaps = 23/326 (7%)

Query: 31  LHGELTHQLAKQLSNAWLPDQAAKLERAGS-------WLLLGDTGPRVRTGCPGWLFLAE 83
           L+G+L H            D+   ++R G+       + L  +  P V  G  GWLF  E
Sbjct: 44  LNGKLAHAFEAHY------DKEFPIKRLGTNLWAALDYTLFHEGRPGVVIGKDGWLFTDE 97

Query: 84  ELQVNRHAQANAQTKRAAVLAIRQALAQRGIGLLVAVVPDKSRIAASALCGLTRPAELNA 143
           E +     Q   +   A V  +++ L +RG+ L++AV+P K+R+    + G  +PA L+ 
Sbjct: 98  EFKPAPSGQ-QLEDNWALVRGVQRELNRRGVKLVLAVIPAKARLYPEHI-GREQPAALHD 155

Query: 144 RAAQ-WVSQLNQDGVAAIDLAPAL--APLGASAYLHTDTHWNETGANAAAQAIAARITAA 200
              Q ++++    G+ + DL  +L  A    + +L TDTHW+  GA   AQ + A I   
Sbjct: 156 SLYQDFLARARAAGIDSPDLLGSLRQAKDNGAVFLRTDTHWSPLGAETVAQRLGAEIRET 215

Query: 201 GVQATPQQAYTAQPGKLAQRPGDLVHLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAA 260
            +   P Q +  + G+     GDL+    LD L     P PE +     TEAA    G  
Sbjct: 216 HLLDVPAQNFVTRVGEERTHKGDLLSFLPLDPLFDELLPRPEQLQQRT-TEAAPALPGGQ 274

Query: 261 AKGGDDLDDLLGDSQLPNVALIGTSFSRNS--NFVGFLQMALGAKIGSFAKDGGKFSGSA 318
             G    DDL GDSQ P +AL+GTS+S N   NF G L+ AL A + ++AK+G       
Sbjct: 275 QSGAG--DDLFGDSQQPRLALVGTSYSANPRWNFEGALKQALSADLINYAKEGKGPLEPM 332

Query: 319 RDYFANPAFTQTPPKLVVWEIPERDL 344
            +   +  F + PP+L+VWE PER L
Sbjct: 333 LELLQDEGFRKDPPQLLVWEFPERYL 358


>PA3546 Non COG
          Length = 474

 Score = 76.6 bits (187), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 24/245 (9%)

Query: 104 AIRQALAQRGIGLLVAVVP-----DKSRIAASALCGLTRP-AELNARAAQWVSQLNQDGV 157
           A+R  L ++GI L+V   P     ++ +++ +   G     A+ N  A   +++  Q G+
Sbjct: 95  ALRDELKRKGIELVVVYQPTRGLVNREKLSPAEKAGFDYELAKKNYLAT--IARFRQAGI 152

Query: 158 AAIDLAPALAPLGASAYLHT-DTHWNETGANAAAQAIAARITAA-GVQATPQQAYTAQPG 215
              D +P        AY    D HW   GA  +A+ +A  +    G +  P++ + ++  
Sbjct: 153 WTPDFSPLFDEKEEHAYYFKGDHHWTPHGARRSAKIVAETLKQVPGFEEIPKKQFESKRV 212

Query: 216 KLAQRPGDLVHLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAAAKGGDDLDDLLGDSQ 275
            L  + G     A         Q    S A            GA+  G     DL GD  
Sbjct: 213 GLLSKLGTFHKAAA--------QLCGNSYATQYVDRFETEPVGASDSG-----DLFGDGG 259

Query: 276 LPNVALIGTSFSRNS-NFVGFLQMALGAKIGSFAKDGGKFSGSARDYFANPAFTQTPPKL 334
            P +AL+GTS S  + NF GFL+   GA I + A  GG F  S   Y  +  F + PPK+
Sbjct: 260 NPQIALVGTSNSGPAYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKI 319

Query: 335 VVWEI 339
           ++WE 
Sbjct: 320 LIWEF 324