BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0526.p (303 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0618 Non COG 335 1e-91 STM0392 [L] COG2974 DNA recombination-dependent growth factor C ... 208 1e-53 ZyaiD [L] COG2974 DNA recombination-dependent growth factor C Ec... 205 9e-53 ECs0445 [L] COG2974 DNA recombination-dependent growth factor C ... 205 9e-53 rdgC [L] COG2974 DNA recombination-dependent growth factor C Eco... 204 2e-52 >RSc0618 Non COG Length = 307 Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 161/295 (54%), Positives = 209/295 (70%), Gaps = 1/295 (0%) Query: 2 FRNAQIYRLPKAWGITAEQLAQHLAPQTFTPAGNMDMQSQGWIQPRESSNGLVHQVNRQF 61 F+N Q++RLP W + +Q+ + LAP F P +++ Q GW PR+ LV+ +NRQ Sbjct: 3 FKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDD-GALVYSINRQM 61 Query: 62 LLRLQTEKKILPSSVINQLTRERAKELEEQQGFPPGRKQTKELKEQVTDELLPRAFTRLS 121 LL + EKK+LP+SV+NQ+T+ RA E+EEQQGF GRKQ +ELKEQVTDELLPRAFT Sbjct: 62 LLVFRAEKKLLPASVVNQVTKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIRR 121 Query: 122 SMWVWIDPVNGWLVADASSPAKAEEALKLLFKAVPRFPLETVRTVMSPGAAMTDWLASDE 181 VWID NGWLV DA++ A ++ LL K++ + PL +VR +SP AAMTDWL S E Sbjct: 122 DTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPLASVRVALSPVAAMTDWLLSGE 181 Query: 182 APDGFTVDQDTELRSTAESRATVRYVRHTLEADQLRQHIETGKQCTRLALTWADKISFTL 241 AP GFTVDQD ELRS+ E ATVRYV H LEAD +R+HIE GKQC RLA+TW ++ISF L Sbjct: 182 APGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFVL 241 Query: 242 AENLSIKKIALLDVLKENHDLTGKNDDERFDGDFVLFAAEAGQLISALVAALGGE 296 +L+IK++ LDV+KE D T +NDDERF+ D L E G++++ LV LGG+ Sbjct: 242 TPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGD 296 >STM0392 [L] COG2974 DNA recombination-dependent growth factor C Sty Salmonella typhimurium LT2 Length = 303 Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 168/297 (56%), Gaps = 2/297 (0%) Query: 2 FRNAQIYRLPKAWGITAEQLAQHLAPQTFTPAGNMDMQSQGWIQPRES-SNGLVHQVNRQ 60 F+N +YRL + + AE++ + LA TFTP G+ DM GW+ P S S+ L H N Q Sbjct: 4 FKNLMVYRLSRDITLRAEEMEKQLASMTFTPCGSQDMAKMGWVPPMGSHSDALTHTANGQ 63 Query: 61 FLLRLQTEKKILPSSVINQLTRERAKELEEQQGFPPGRKQTKELKEQVTDELLPRAFTRL 120 ++ + E+KILPS VI Q + ++LE QG + + LK++V LLPRAF+R Sbjct: 64 IIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRF 123 Query: 121 SSMWVWIDPVNGWLVADASSPAKAEEALKLLFKAVPRFPLETVRTVMSPGAAMTDWLASD 180 S +WID VNG ++ D +S KAE+ L LL K++ P+ + +T+W+ S Sbjct: 124 SQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLALENPIELTLTEWVRSG 183 Query: 181 EAPDGFTVDQDTELRSTAESRATVRYVRHTLEADQLRQHIETGKQCTRLALTWADKISFT 240 GF + + EL++ E +R + L +D++ HIE GK T+LAL W +I F Sbjct: 184 TVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFV 243 Query: 241 LAENLSIKKIALLDVLKE-NHDLTGKNDDERFDGDFVLFAAEAGQLISALVAALGGE 296 + ++ SIK++ D L++ N D+ ++ +RFD DF+L E LI +LV LGGE Sbjct: 244 MCDDGSIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGE 300 >ZyaiD [L] COG2974 DNA recombination-dependent growth factor C EcZ Escherichia coli O157:H7 EDL933 Length = 303 Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 2/297 (0%) Query: 2 FRNAQIYRLPKAWGITAEQLAQHLAPQTFTPAGNMDMQSQGWIQPRES-SNGLVHQVNRQ 60 F+N +YRL + + AE++ + LA FTP G+ DM GW+ P S S+ L H N Q Sbjct: 4 FKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQ 63 Query: 61 FLLRLQTEKKILPSSVINQLTRERAKELEEQQGFPPGRKQTKELKEQVTDELLPRAFTRL 120 ++ + E+KILPS VI Q + +LE +Q + + LK++V LLPRAF+R Sbjct: 64 IVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRF 123 Query: 121 SSMWVWIDPVNGWLVADASSPAKAEEALKLLFKAVPRFPLETVRTVMSPGAAMTDWLASD 180 S +WID VNG ++ D +S KAE+ L LL K++ P+ + +T+W+ S Sbjct: 124 SQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMANPIELTLTEWVRSG 183 Query: 181 EAPDGFTVDQDTELRSTAESRATVRYVRHTLEADQLRQHIETGKQCTRLALTWADKISFT 240 A GF + + EL+S E +R + L ++++ HIE GK T+LAL W +I F Sbjct: 184 SAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFV 243 Query: 241 LAENLSIKKIALLDVLKE-NHDLTGKNDDERFDGDFVLFAAEAGQLISALVAALGGE 296 + ++ S+K++ D L++ N D+ ++ +RFD DF+L E LI L+ LGGE Sbjct: 244 MCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300 >ECs0445 [L] COG2974 DNA recombination-dependent growth factor C Ecs Escherichia coli O157:H7 Length = 303 Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 2/297 (0%) Query: 2 FRNAQIYRLPKAWGITAEQLAQHLAPQTFTPAGNMDMQSQGWIQPRES-SNGLVHQVNRQ 60 F+N +YRL + + AE++ + LA FTP G+ DM GW+ P S S+ L H N Q Sbjct: 4 FKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQ 63 Query: 61 FLLRLQTEKKILPSSVINQLTRERAKELEEQQGFPPGRKQTKELKEQVTDELLPRAFTRL 120 ++ + E+KILPS VI Q + +LE +Q + + LK++V LLPRAF+R Sbjct: 64 IVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRF 123 Query: 121 SSMWVWIDPVNGWLVADASSPAKAEEALKLLFKAVPRFPLETVRTVMSPGAAMTDWLASD 180 S +WID VNG ++ D +S KAE+ L LL K++ P+ + +T+W+ S Sbjct: 124 SQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMANPIELTLTEWVRSG 183 Query: 181 EAPDGFTVDQDTELRSTAESRATVRYVRHTLEADQLRQHIETGKQCTRLALTWADKISFT 240 A GF + + EL+S E +R + L ++++ HIE GK T+LAL W +I F Sbjct: 184 SAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFV 243 Query: 241 LAENLSIKKIALLDVLKE-NHDLTGKNDDERFDGDFVLFAAEAGQLISALVAALGGE 296 + ++ S+K++ D L++ N D+ ++ +RFD DF+L E LI L+ LGGE Sbjct: 244 MCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300 >rdgC [L] COG2974 DNA recombination-dependent growth factor C Eco Escherichia coli K12 Length = 303 Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 2/297 (0%) Query: 2 FRNAQIYRLPKAWGITAEQLAQHLAPQTFTPAGNMDMQSQGWIQPRES-SNGLVHQVNRQ 60 F+N +YRL + + AE++ + LA FTP G+ DM GW+ P S S+ L H N Q Sbjct: 4 FKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQ 63 Query: 61 FLLRLQTEKKILPSSVINQLTRERAKELEEQQGFPPGRKQTKELKEQVTDELLPRAFTRL 120 ++ + E+KILPS VI Q + +LE +Q + + LK++V LLPRAF+R Sbjct: 64 IVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRF 123 Query: 121 SSMWVWIDPVNGWLVADASSPAKAEEALKLLFKAVPRFPLETVRTVMSPGAAMTDWLASD 180 S +WID VNG ++ D +S KAE+ L LL K++ P+ + +T+W+ S Sbjct: 124 SQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSG 183 Query: 181 EAPDGFTVDQDTELRSTAESRATVRYVRHTLEADQLRQHIETGKQCTRLALTWADKISFT 240 A GF + + EL+S E +R + L ++++ HIE GK T+LAL W +I F Sbjct: 184 SAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFV 243 Query: 241 LAENLSIKKIALLDVLKE-NHDLTGKNDDERFDGDFVLFAAEAGQLISALVAALGGE 296 + ++ S+K++ D L++ N D+ ++ +RFD DF+L E LI L+ LGGE Sbjct: 244 MCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300