BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0446.p         (323 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0350_2 [NU] COG1705 Muramidase (flagellum-specific) Rso Ralst...   184   3e-46
ECs1459_2 [NU] COG1705 Muramidase (flagellum-specific) Ecs Esche...   142   1e-33
ZflgJ_2 [NU] COG1705 Muramidase (flagellum-specific) EcZ Escheri...   142   1e-33
flgJ_2 [NU] COG1705 Muramidase (flagellum-specific) Eco Escheric...   142   1e-33
YPO1807_2 [NU] COG1705 Muramidase (flagellum-specific) Ype Yersi...   141   3e-33

>RSp0350_2 [NU] COG1705 Muramidase (flagellum-specific) Rso Ralstonia
           solanacearum
          Length = 152

 Score =  184 bits (466), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 108/148 (72%), Gaps = 2/148 (1%)

Query: 174 VEAFQNRLQADAEMASKMTGIPAKFMLAQAALETGWGKKEIVTRDGRSAHNLFGIKATGN 233
           + +F N+L   A  AS+ TGIPA FM+  AALE+GWG++EI  +DG S+HNLFGIKA G+
Sbjct: 3   MSSFYNKLIDHATQASQETGIPASFMIGHAALESGWGRREIRAKDGTSSHNLFGIKAGGS 62

Query: 234 WTGKVVEATTIEYINGKPQKRVEKFRAYDSYADAFKDYANLLRSNPRYEKVLA--SAQDA 291
           WTG   E  T EY+ G   K  EKFRAY SYA+AFKDYANLL SNPRY  V+A  + +DA
Sbjct: 63  WTGPTTEVMTTEYVGGVAHKVKEKFRAYGSYAEAFKDYANLLSSNPRYSNVVAAGAGKDA 122

Query: 292 HGFAYGLQRAGYATDPHYAEKLSRIIRQ 319
             FA GLQRAGYATDP+YA K+  ++RQ
Sbjct: 123 ASFARGLQRAGYATDPNYANKIMAVLRQ 150


>ECs1459_2 [NU] COG1705 Muramidase (flagellum-specific) Ecs Escherichia coli
           O157:H7
          Length = 146

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 1/127 (0%)

Query: 193 GIPAKFMLAQAALETGWGKKEIVTRDGRSAHNLFGIKATGNWTGKVVEATTIEYINGKPQ 252
           G+P   +LAQAALE+GWG+++I   +G  ++NLFG+KA+GNW G V E TT EY NG+ +
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 253 KRVEKFRAYDSYADAFKDYANLLRSNPRYEKVLASAQDAHGFAYGLQRAGYATDPHYAEK 312
           K   KFR Y SY +A  DY  LL  NPRY  V  +A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 313 LSRIIRQ 319
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>ZflgJ_2 [NU] COG1705 Muramidase (flagellum-specific) EcZ Escherichia coli
           O157:H7 EDL933
          Length = 146

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 1/127 (0%)

Query: 193 GIPAKFMLAQAALETGWGKKEIVTRDGRSAHNLFGIKATGNWTGKVVEATTIEYINGKPQ 252
           G+P   +LAQAALE+GWG+++I   +G  ++NLFG+KA+GNW G V E TT EY NG+ +
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 253 KRVEKFRAYDSYADAFKDYANLLRSNPRYEKVLASAQDAHGFAYGLQRAGYATDPHYAEK 312
           K   KFR Y SY +A  DY  LL  NPRY  V  +A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 313 LSRIIRQ 319
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>flgJ_2 [NU] COG1705 Muramidase (flagellum-specific) Eco Escherichia coli
           K12
          Length = 146

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 1/127 (0%)

Query: 193 GIPAKFMLAQAALETGWGKKEIVTRDGRSAHNLFGIKATGNWTGKVVEATTIEYINGKPQ 252
           G+P   +LAQAALE+GWG+++I   +G  ++NLFG+KA+GNW G V E TT EY NG+ +
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 253 KRVEKFRAYDSYADAFKDYANLLRSNPRYEKVLASAQDAHGFAYGLQRAGYATDPHYAEK 312
           K   KFR Y SY +A  DY  LL  NPRY  V  +A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 313 LSRIIRQ 319
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>YPO1807_2 [NU] COG1705 Muramidase (flagellum-specific) Ype Yersinia pestis
          Length = 147

 Score =  141 bits (355), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 1/127 (0%)

Query: 193 GIPAKFMLAQAALETGWGKKEIVTRDGRSAHNLFGIKATGNWTGKVVEATTIEYINGKPQ 252
           GIP + ++AQAALE+GWG++EI T DG+S++N+FGIKA  +W G V E TT EY  G  +
Sbjct: 1   GIPHQLIMAQAALESGWGQREIPTADGKSSYNVFGIKAGSSWNGPVSEITTTEYEQGVAK 60

Query: 253 KRVEKFRAYDSYADAFKDYANLLRSNPRYEKVLASAQDAHGFAYGLQRAGYATDPHYAEK 312
           K   +FR Y SY +A  DY  LL  NPRY  V A+AQ     A+ LQ+AGYATDP YA+K
Sbjct: 61  KTKARFRVYGSYVEAVSDYVKLLTQNPRYAHV-AAAQSPEQGAHALQKAGYATDPQYAQK 119

Query: 313 LSRIIRQ 319
           L  +I+Q
Sbjct: 120 LVSVIQQ 126