BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0437.p         (180 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO2999 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis       133   3e-31
YPO1364 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis        95   9e-20
BMEI0359 [M] COG0845 Membrane-fusion protein Bme Brucella melite...    94   1e-19
Z1115 [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O...    92   6e-19
ECs0964 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli...    92   6e-19

>YPO2999 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis
          Length = 401

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 84/112 (75%)

Query: 28  RALTPPAPPSYLTATASVADIQDVVLASGTVKAYKQVSVGAQVSGQIKSLKVALGERVKK 87
           R ++PP  PSY+TA A + D++  VLA GT+KA KQV+VGAQVSGQIK+L V LG++V+K
Sbjct: 28  RWISPPDKPSYITAVAEIRDLEQTVLADGTIKAQKQVTVGAQVSGQIKALHVTLGQQVEK 87

Query: 88  GQLVAEIDSLTQANALASAEYSLQNLQAQLRAKEATLKQAQLAYARQQMMLA 139
            QLVAEID L Q NAL  AE +L+N+QAQ  AK AT K  QL Y RQQ +LA
Sbjct: 88  NQLVAEIDDLAQQNALKDAEEALKNVQAQRAAKIATQKNNQLTYQRQQQILA 139


>YPO1364 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis
          Length = 371

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 75/125 (60%)

Query: 13  LLSLAVLLAGGYLVHRALTPPAPPSYLTATASVADIQDVVLASGTVKAYKQVSVGAQVSG 72
           L ++AVLL GG+ + R L  P P +Y T      D+Q  VLA+G + A ++V VGAQVSG
Sbjct: 12  LAAIAVLLIGGFFIARHLMAPVPVNYQTVKVVHRDLQQNVLATGKLDAVRKVDVGAQVSG 71

Query: 73  QIKSLKVALGERVKKGQLVAEIDSLTQANALASAEYSLQNLQAQLRAKEATLKQAQLAYA 132
           Q++ L V +G+ VK+GQL+A ID     N +   E +LQ+L AQ    +A L  A +   
Sbjct: 72  QLEKLYVEIGDHVKRGQLLAMIDPQQAQNQIKEVEATLQDLNAQRIQAKAELHLATVTLG 131

Query: 133 RQQMM 137
           RQQ +
Sbjct: 132 RQQNL 136


>BMEI0359 [M] COG0845 Membrane-fusion protein Bme Brucella melitensis
          Length = 408

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 1/134 (0%)

Query: 7   RRPKILLLSLAVLLAGGYLVHRALTPPAP-PSYLTATASVADIQDVVLASGTVKAYKQVS 65
           RR  + L + A+++  G+  + +        SYL  T +  DI++ + A GT+ A + V+
Sbjct: 25  RRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAVGTLSALRSVN 84

Query: 66  VGAQVSGQIKSLKVALGERVKKGQLVAEIDSLTQANALASAEYSLQNLQAQLRAKEATLK 125
           VGAQVSGQ+KS+KV +G+ VK+GQL+AEID       +  A   L NL+AQL +K+A L 
Sbjct: 85  VGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLKAQLLSKDAQLT 144

Query: 126 QAQLAYARQQMMLA 139
             +L  ARQ+ +LA
Sbjct: 145 LKKLNAARQKSLLA 158


>Z1115 [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O157:H7
           EDL933
          Length = 380

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 1/123 (0%)

Query: 13  LLSLAVLLAGGYLVHRALTPPAPPSYLTATASVADIQDVVLASGTVKAYKQVSVGAQVSG 72
           +++L +++AG   + R L  P P +Y T      D+Q  VLA+G + A ++V VGAQVSG
Sbjct: 21  VIALVIVIAGLITLWRILNAPVP-TYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSG 79

Query: 73  QIKSLKVALGERVKKGQLVAEIDSLTQANALASAEYSLQNLQAQLRAKEATLKQAQLAYA 132
           Q+K+L VA+G++VKK QL+  ID     N +   E +L  L+AQ +  EA LK A++ Y+
Sbjct: 80  QLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYS 139

Query: 133 RQQ 135
           RQQ
Sbjct: 140 RQQ 142


>ECs0964 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli O157:H7
          Length = 380

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 1/123 (0%)

Query: 13  LLSLAVLLAGGYLVHRALTPPAPPSYLTATASVADIQDVVLASGTVKAYKQVSVGAQVSG 72
           +++L +++AG   + R L  P P +Y T      D+Q  VLA+G + A ++V VGAQVSG
Sbjct: 21  VIALVIVIAGLITLWRILNAPVP-TYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSG 79

Query: 73  QIKSLKVALGERVKKGQLVAEIDSLTQANALASAEYSLQNLQAQLRAKEATLKQAQLAYA 132
           Q+K+L VA+G++VKK QL+  ID     N +   E +L  L+AQ +  EA LK A++ Y+
Sbjct: 80  QLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYS 139

Query: 133 RQQ 135
           RQQ
Sbjct: 140 RQQ 142