BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0421.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0224 Non COG 431 e-120 PA4583 [S] COG1690 Uncharacterized conserved protein Pae Pseudom... 406 e-113 ZrtcB [S] COG1690 Uncharacterized conserved protein EcZ Escheric... 398 e-111 ECs4264 [S] COG1690 Uncharacterized conserved protein Ecs Escher... 398 e-111 rtcB [S] COG1690 Uncharacterized conserved protein Eco Escherich... 396 e-110 >RSc0224 Non COG Length = 406 Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust. Identities = 200/261 (76%), Positives = 227/261 (86%) Query: 2 LCQKTPKLEKTNHYKHLGTLGSGNHFIEICLDEEGAVWFMLHSGSRGVGNAIGTHFIELA 61 + K P+L KTN++KHLGTLG+GNHFIE+CLDEE VWFMLHSGSRGVGNAIG FIELA Sbjct: 146 ITDKYPRLRKTNNHKHLGTLGTGNHFIEVCLDEENRVWFMLHSGSRGVGNAIGNLFIELA 205 Query: 62 QQDMRKHMVNLPDRDLAYLKEGSTHYDDYLQAVGWAQKFARMNREVMMQNLIAAVRSVIA 121 Q DMR+H+ NLPDRDLAY +EGS H+DDY++AVGWAQ +AR NR MMQN+IAA R VIA Sbjct: 206 QADMRQHIANLPDRDLAYFEEGSEHFDDYVEAVGWAQDYARRNRATMMQNVIAAARKVIA 265 Query: 122 KPFQTHVEAVNCHHNYVQKEHHFGQDVLVTRKGAVSARAGELGIIPGSMGARSFIVRGKG 181 KPF VEAVNCHHNYVQ+E HFG +VLVTRKGAVSA+ G+LGIIPGSMGA+SFIVRG G Sbjct: 266 KPFAADVEAVNCHHNYVQRETHFGHEVLVTRKGAVSAQKGQLGIIPGSMGAKSFIVRGLG 325 Query: 182 EAESFHSCSHGAGRTMSRTEAKKRFSVEDHIRATEGVECRKDEAVIDEIPMAYKDIDAVM 241 E+F SCSHGAGRTMSRT+AKKR++V+D +RAT VECRKD VIDEIPMAYKDIDAVM Sbjct: 326 NEEAFCSCSHGAGRTMSRTQAKKRYTVDDQVRATAHVECRKDADVIDEIPMAYKDIDAVM 385 Query: 242 AAQQDLVEVVHTLRQIVCVKG 262 AAQ DLVE+VHTLRQ+VCVKG Sbjct: 386 AAQADLVEIVHTLRQVVCVKG 406 >PA4583 [S] COG1690 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 404 Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/261 (73%), Positives = 222/261 (85%) Query: 2 LCQKTPKLEKTNHYKHLGTLGSGNHFIEICLDEEGAVWFMLHSGSRGVGNAIGTHFIELA 61 + K P+LEKTN+ +HLGTLG+GNHFIE+CLDE VWFMLHSGSRGVGNAIG FIELA Sbjct: 144 ITDKHPRLEKTNNRQHLGTLGTGNHFIEVCLDEADRVWFMLHSGSRGVGNAIGNLFIELA 203 Query: 62 QQDMRKHMVNLPDRDLAYLKEGSTHYDDYLQAVGWAQKFARMNREVMMQNLIAAVRSVIA 121 + DMR+H+ NLPD+DLAY +EGS ++DDY++AVGWAQ FAR NR +MM +I A R VI Sbjct: 204 KADMRQHIANLPDKDLAYFEEGSRNFDDYVEAVGWAQDFARQNRALMMHAVIEAARQVIR 263 Query: 122 KPFQTHVEAVNCHHNYVQKEHHFGQDVLVTRKGAVSARAGELGIIPGSMGARSFIVRGKG 181 KPF+ ++EAV+CHHNYVQKE HFGQ+VLVTRKGAVSA+ G+LGIIPGSMGA+SFIVRG G Sbjct: 264 KPFEANLEAVDCHHNYVQKERHFGQEVLVTRKGAVSAQKGQLGIIPGSMGAKSFIVRGLG 323 Query: 182 EAESFHSCSHGAGRTMSRTEAKKRFSVEDHIRATEGVECRKDEAVIDEIPMAYKDIDAVM 241 E+F SCSHGAGRTMSRT+AKK FSV D RAT VECRKD VIDEIPMAYKDID VM Sbjct: 324 NQEAFCSCSHGAGRTMSRTKAKKVFSVADQARATAHVECRKDADVIDEIPMAYKDIDRVM 383 Query: 242 AAQQDLVEVVHTLRQIVCVKG 262 AQ++LVEV+HTLRQ+VCVKG Sbjct: 384 EAQRELVEVLHTLRQVVCVKG 404 >ZrtcB [S] COG1690 Uncharacterized conserved protein EcZ Escherichia coli O157:H7 EDL933 Length = 408 Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust. Identities = 185/265 (69%), Positives = 219/265 (82%), Gaps = 4/265 (1%) Query: 2 LCQKTPKLEKTNHYKHLGTLGSGNHFIEICLDEEGAVWFMLHSGSRGVGNAIGTHFIELA 61 L QK P+ TN+YKHLGTLG+GNHFIEICLDE VW MLHSGSRG+GNAIGT+FI+LA Sbjct: 144 LTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLA 203 Query: 62 QQDMRKHMVNLPDRDLAYLKEGSTHYDDYLQAVGWAQKFARMNREVMMQNLIAAVRSVIA 121 Q++M++ + LP RDLAY EG+ ++DDYL+AV WAQ FA +NR+VMM+N++ A++S+ Sbjct: 204 QKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQ 263 Query: 122 K----PFQTHVEAVNCHHNYVQKEHHFGQDVLVTRKGAVSARAGELGIIPGSMGARSFIV 177 K P +E +NCHHNYVQKE HFG+++ VTRKGAVSARAG+ GIIPGSMGA+SFIV Sbjct: 264 KTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIV 323 Query: 178 RGKGEAESFHSCSHGAGRTMSRTEAKKRFSVEDHIRATEGVECRKDEAVIDEIPMAYKDI 237 RG G ESF SCSHGAGR MSRT+AKK FSVED IRAT VECRKD VIDEIPMAYKDI Sbjct: 324 RGLGNEESFCSCSHGAGRVMSRTKAKKMFSVEDQIRATVHVECRKDAEVIDEIPMAYKDI 383 Query: 238 DAVMAAQQDLVEVVHTLRQIVCVKG 262 DAVMAAQ DLVEV++TLRQ+VCVKG Sbjct: 384 DAVMAAQSDLVEVIYTLRQVVCVKG 408 >ECs4264 [S] COG1690 Uncharacterized conserved protein Ecs Escherichia coli O157:H7 Length = 408 Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust. Identities = 185/265 (69%), Positives = 219/265 (82%), Gaps = 4/265 (1%) Query: 2 LCQKTPKLEKTNHYKHLGTLGSGNHFIEICLDEEGAVWFMLHSGSRGVGNAIGTHFIELA 61 L QK P+ TN+YKHLGTLG+GNHFIEICLDE VW MLHSGSRG+GNAIGT+FI+LA Sbjct: 144 LTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLA 203 Query: 62 QQDMRKHMVNLPDRDLAYLKEGSTHYDDYLQAVGWAQKFARMNREVMMQNLIAAVRSVIA 121 Q++M++ + LP RDLAY EG+ ++DDYL+AV WAQ FA +NR+VMM+N++ A++S+ Sbjct: 204 QKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQ 263 Query: 122 K----PFQTHVEAVNCHHNYVQKEHHFGQDVLVTRKGAVSARAGELGIIPGSMGARSFIV 177 K P +E +NCHHNYVQKE HFG+++ VTRKGAVSARAG+ GIIPGSMGA+SFIV Sbjct: 264 KTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIV 323 Query: 178 RGKGEAESFHSCSHGAGRTMSRTEAKKRFSVEDHIRATEGVECRKDEAVIDEIPMAYKDI 237 RG G ESF SCSHGAGR MSRT+AKK FSVED IRAT VECRKD VIDEIPMAYKDI Sbjct: 324 RGLGNEESFCSCSHGAGRVMSRTKAKKMFSVEDQIRATVHVECRKDAEVIDEIPMAYKDI 383 Query: 238 DAVMAAQQDLVEVVHTLRQIVCVKG 262 DAVMAAQ DLVEV++TLRQ+VCVKG Sbjct: 384 DAVMAAQSDLVEVIYTLRQVVCVKG 408 >rtcB [S] COG1690 Uncharacterized conserved protein Eco Escherichia coli K12 Length = 408 Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust. Identities = 184/265 (69%), Positives = 218/265 (82%), Gaps = 4/265 (1%) Query: 2 LCQKTPKLEKTNHYKHLGTLGSGNHFIEICLDEEGAVWFMLHSGSRGVGNAIGTHFIELA 61 L QK P+ TN+YKHLGTLG+GNHFIEICLDE VW MLHSGSRG+GNAIGT+FI+LA Sbjct: 144 LTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLA 203 Query: 62 QQDMRKHMVNLPDRDLAYLKEGSTHYDDYLQAVGWAQKFARMNREVMMQNLIAAVRSVIA 121 Q++M++ + LP RDLAY EG+ ++DDYL+AV WAQ FA +NR+ MM+N++ A++S+ Sbjct: 204 QKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQ 263 Query: 122 K----PFQTHVEAVNCHHNYVQKEHHFGQDVLVTRKGAVSARAGELGIIPGSMGARSFIV 177 K P +E +NCHHNYVQKE HFG+++ VTRKGAVSARAG+ GIIPGSMGA+SFIV Sbjct: 264 KTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIV 323 Query: 178 RGKGEAESFHSCSHGAGRTMSRTEAKKRFSVEDHIRATEGVECRKDEAVIDEIPMAYKDI 237 RG G ESF SCSHGAGR MSRT+AKK FSVED IRAT VECRKD VIDEIPMAYKDI Sbjct: 324 RGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDI 383 Query: 238 DAVMAAQQDLVEVVHTLRQIVCVKG 262 DAVMAAQ DLVEV++TLRQ+VCVKG Sbjct: 384 DAVMAAQSDLVEVIYTLRQVVCVKG 408