BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0381.p (218 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1304 [KT] COG1974 SOS-response transcriptional repressors (Re... 290 2e-78 lexA [KT] COG1974 SOS-response transcriptional repressors (RecA-... 243 2e-64 ZlexA [KT] COG1974 SOS-response transcriptional repressors (RecA... 243 2e-64 ECs5026 [KT] COG1974 SOS-response transcriptional repressors (Re... 243 2e-64 PA3007 [KT] COG1974 SOS-response transcriptional repressors (Rec... 242 4e-64 >RSc1304 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Rso Ralstonia solanacearum Length = 216 Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 143/215 (66%), Positives = 173/215 (80%), Gaps = 3/215 (1%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M LT RQ+QI +LI I+ TGFPPTRAEIAAE GF S NAAEEHL+ALARKG IE++P Sbjct: 1 MATLTTRQQQIYDLIHQTIQRTGFPPTRAEIAAEFGFSSPNAAEEHLRALARKGVIELTP 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 G SRGIRLR G ++ Q +LP LMQL+LPL+GRVAAGSPILA EH+++ YQVDP Sbjct: 61 GASRGIRLRAEGG---ASPHQFSLPSMGLMQLTLPLVGRVAAGSPILAAEHIDRQYQVDP 117 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 ++F ++PD+LLKVRGMSMRDAGILDGDLLAV+RA +A NG+IVVARL D+VTVKR+Q+ G Sbjct: 118 SLFSSRPDFLLKVRGMSMRDAGILDGDLLAVQRAAEAANGKIVVARLGDDVTVKRFQRKG 177 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLR 215 + L ENP+FEPI V + D+F LEGLAVGL+R Sbjct: 178 RQVELIAENPDFEPIHVDLDRDEFQLEGLAVGLIR 212 >lexA [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Eco Escherichia coli K12 Length = 202 Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/219 (55%), Positives = 152/219 (69%), Gaps = 20/219 (9%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M LTARQ+++ +LI++ I TG PPTRAEIA LGFRS NAAEEHL+ALARKG IEI Sbjct: 1 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 G SRGIRL + G LPL+GRVAAG P+LAQ+H+E YQVDP Sbjct: 61 GASRGIRLLQEEEEG------------------LPLVGRVAAGEPLLAQQHIEGHYQVDP 102 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 ++F D+LL+V GMSM+D GI+DGDLLAV + RNGQ+VVAR+ DEVTVKR +K G Sbjct: 103 SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQG 162 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRS--W 217 + + L PEN EF+PI+V F +EGLAVG++R+ W Sbjct: 163 NKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDW 201 >ZlexA [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) EcZ Escherichia coli O157:H7 EDL933 Length = 202 Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/219 (55%), Positives = 152/219 (69%), Gaps = 20/219 (9%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M LTARQ+++ +LI++ I TG PPTRAEIA LGFRS NAAEEHL+ALARKG IEI Sbjct: 1 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 G SRGIRL + G LPL+GRVAAG P+LAQ+H+E YQVDP Sbjct: 61 GASRGIRLLQEEEEG------------------LPLVGRVAAGEPLLAQQHIEGHYQVDP 102 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 ++F D+LL+V GMSM+D GI+DGDLLAV + RNGQ+VVAR+ DEVTVKR +K G Sbjct: 103 SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQG 162 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRS--W 217 + + L PEN EF+PI+V F +EGLAVG++R+ W Sbjct: 163 NKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDW 201 >ECs5026 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Ecs Escherichia coli O157:H7 Length = 202 Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/219 (55%), Positives = 152/219 (69%), Gaps = 20/219 (9%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M LTARQ+++ +LI++ I TG PPTRAEIA LGFRS NAAEEHL+ALARKG IEI Sbjct: 1 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 G SRGIRL + G LPL+GRVAAG P+LAQ+H+E YQVDP Sbjct: 61 GASRGIRLLQEEEEG------------------LPLVGRVAAGEPLLAQQHIEGHYQVDP 102 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 ++F D+LL+V GMSM+D GI+DGDLLAV + RNGQ+VVAR+ DEVTVKR +K G Sbjct: 103 SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQG 162 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRS--W 217 + + L PEN EF+PI+V F +EGLAVG++R+ W Sbjct: 163 NKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDW 201 >PA3007 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Pae Pseudomonas aeruginosa Length = 204 Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 123/215 (57%), Positives = 161/215 (74%), Gaps = 12/215 (5%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M KLT RQ +IL+ IK +E+ GFPPTRAEIA ELGF+S NAAEEHL+ALARKGAIE++P Sbjct: 1 MQKLTPRQAEILSFIKRCLEDHGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTP 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 G SRGIR+ G PH A LP+IGRVAAG+PILA++++E++ +++P Sbjct: 61 GASRGIRI-----PGFE-------PHAANDDEGLPVIGRVAAGAPILAEQNIEESCRINP 108 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 A F + DYLL+VRGMSM+D GILDGDLLAV +ARNGQ+VVAR+ +EVTVKR+++ G Sbjct: 109 AFFNPRADYLLRVRGMSMKDIGILDGDLLAVHVTREARNGQVVVARIGEEVTVKRFKREG 168 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLR 215 S + L ENPEF PI V ++ + +EGL+VG++R Sbjct: 169 SKVWLLAENPEFAPIEVDLKEQELIIEGLSVGVIR 203