BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0344.p         (117 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1333 [D] COG0239 Integral membrane protein possibly involved ...   111   4e-25
PA4383 [D] COG0239 Integral membrane protein possibly involved i...    90   1e-18
ZcrcB [D] COG0239 Integral membrane protein possibly involved in...    85   4e-17
ECs0663 [D] COG0239 Integral membrane protein possibly involved ...    85   4e-17
crcB [D] COG0239 Integral membrane protein possibly involved in ...    84   1e-16

>RSc1333 [D] COG0239 Integral membrane protein possibly involved in
           chromosome condensation Rso Ralstonia solanacearum
          Length = 126

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 76/115 (66%)

Query: 1   MGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALAPEWRLFA 60
           +GAALGAWLRW  +V+WN     +P GTLAAN +G  +IG  V +F+ H +L PEWRL A
Sbjct: 11  VGAALGAWLRWAFAVLWNAINPALPYGTLAANLLGGYLIGVAVGFFDTHASLPPEWRLLA 70

Query: 61  VTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYRAL 115
           VTG LGGLTTFSTFS+E M  +  GDY   + H   HL GS+ L + G  + R L
Sbjct: 71  VTGFLGGLTTFSTFSSEVMANILAGDYAIGMLHVAAHLGGSLFLTMLGLWTVRTL 125


>PA4383 [D] COG0239 Integral membrane protein possibly involved in
           chromosome condensation Pae Pseudomonas aeruginosa
          Length = 127

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 65/108 (60%)

Query: 10  RWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALAPEWRLFAVTGVLGGLT 69
           RW + +  N     +P GTL AN +G  VIG  +AYF Q P +APEWRL  +TG  GGLT
Sbjct: 19  RWFLGLKLNSLLPSIPPGTLLANLVGGYVIGAAIAYFAQAPGIAPEWRLLIITGFCGGLT 78

Query: 70  TFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYRALAG 117
           TFSTFSAE + LLQ G   WA G    H+ GS+++ + G  S   + G
Sbjct: 79  TFSTFSAEVVSLLQEGRLGWAAGAIATHVSGSLLMTLLGLFSMNWMLG 126


>ZcrcB [D] COG0239 Integral membrane protein possibly involved in
           chromosome condensation EcZ Escherichia coli O157:H7
           EDL933
          Length = 127

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 67/109 (61%)

Query: 1   MGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALAPEWRLFA 60
           +G   G+  RW +S+ +N     +PLGTLAAN IGA +IG   A+F +   + P W++  
Sbjct: 10  IGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLI 69

Query: 61  VTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGF 109
            TG  GGLTTFSTFSAE + LLQ G + WA+ +  ++LLGS  +    F
Sbjct: 70  TTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAF 118


>ECs0663 [D] COG0239 Integral membrane protein possibly involved in
           chromosome condensation Ecs Escherichia coli O157:H7
          Length = 127

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 67/109 (61%)

Query: 1   MGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALAPEWRLFA 60
           +G   G+  RW +S+ +N     +PLGTLAAN IGA +IG   A+F +   + P W++  
Sbjct: 10  IGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLI 69

Query: 61  VTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGF 109
            TG  GGLTTFSTFSAE + LLQ G + WA+ +  ++LLGS  +    F
Sbjct: 70  TTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAF 118


>crcB [D] COG0239 Integral membrane protein possibly involved in
           chromosome condensation Eco Escherichia coli K12
          Length = 127

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 68/114 (59%)

Query: 1   MGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALAPEWRLFA 60
           +G   G+  RW +S+ +N     +PLGTL AN IGA +IG   A+F +   + P W++  
Sbjct: 10  IGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIGAFIIGIGFAWFSRMTNIDPVWKVLI 69

Query: 61  VTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYRA 114
            TG  GGLTTFSTFSAE + LLQ G + WA+ +  ++LLGS  +    F  + A
Sbjct: 70  TTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSA 123