BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0326.p         (295 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH1681 [G] COG1803 Methylglyoxal synthase Bha Bacillus halodurans      67   4e-11
RSc2185 [G] COG1803 Methylglyoxal synthase Rso Ralstonia solanac...    67   4e-11
PM0394 [G] COG1803 Methylglyoxal synthase Pmu Pasteurella multocida    66   1e-10
mgsA [G] COG1803 Methylglyoxal synthase Eco Escherichia coli K12       66   1e-10
ZmgsA [G] COG1803 Methylglyoxal synthase EcZ Escherichia coli O1...    66   1e-10

>BH1681 [G] COG1803 Methylglyoxal synthase Bha Bacillus halodurans
          Length = 138

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 9/103 (8%)

Query: 163 IALIAHDAMKTRMLELAEKHFDVLDQFAFRCATGTTGGLLNQLAVKMKGEAGRNWVKPFL 222
           IALIAHD  K  M++    + DVL       ATGTTG  +         EA +  VK F 
Sbjct: 3   IALIAHDKKKDEMVQFTIAYKDVLKDHEL-YATGTTGMRIM--------EAAQLPVKRFK 53

Query: 223 SGPLGGDAQIAELILERQCRRVLFLEDPHVARQHEADIQLLER 265
           SGPLGGD QI  L+ E +   ++FL DP  A+ HE D+  L R
Sbjct: 54  SGPLGGDQQIGALVAENKFDLIIFLRDPLTAQPHEPDVTALVR 96


>RSc2185 [G] COG1803 Methylglyoxal synthase Rso Ralstonia solanacearum
          Length = 135

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 163 IALIAHDAMKTRMLELAEKHFDVLDQFAFRC---ATGTTGGLLNQLAVKMKGEAGRNWVK 219
           IALIAHD  K  M+  A+ H      F  RC   ATGTTGG       +++ E G + V+
Sbjct: 7   IALIAHDHKKDDMIAFAQTH----KAFLMRCDLLATGTTGG-------RLQDEVGLS-VQ 54

Query: 220 PFLSGPLGGDAQIAELILERQCRRVLFLEDPHVARQHEADIQLLERAA 267
             LSGP GGD QI   + E +   V+FL DP   + HE DI  L RA 
Sbjct: 55  RMLSGPWGGDLQIGAQLAEGRVDAVIFLRDPMTPQPHEPDINALVRAC 102


>PM0394 [G] COG1803 Methylglyoxal synthase Pmu Pasteurella multocida
          Length = 152

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)

Query: 160 DEGIALIAHDAMKTRMLELAEKHFDVLDQFAFRCATGTTGGLLNQLAVKMKGEAGRNWVK 219
           ++ IAL+AHD  K  ++   + H  +L Q     ATGTTG L+ +       EA    +K
Sbjct: 11  NKHIALVAHDHCKQDLINWCKTHRTLLAQHTLY-ATGTTGNLIQK-------EANLP-IK 61

Query: 220 PFLSGPLGGDAQIAELILERQCRRVLFLEDPHVARQHEADIQLLERAA 267
             LSGP+GGD Q+  LI E+Q   ++F  DP  A  H+ D++ L R A
Sbjct: 62  SLLSGPMGGDQQLGGLIAEKQIDVLIFFWDPMNAVPHDPDVKALMRIA 109


>mgsA [G] COG1803 Methylglyoxal synthase Eco Escherichia coli K12
          Length = 155

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 9/105 (8%)

Query: 163 IALIAHDAMKTRMLELAEKHFDVLDQFAFRCATGTTGGLLNQLAVKMKGEAGRNWVKPFL 222
           IAL+AHD  K  ++   E+H  +L+Q     ATGTTG L+++         G N V   L
Sbjct: 17  IALVAHDHCKQMLMSWVERHQPLLEQHVLY-ATGTTGNLISR-------ATGMN-VNAML 67

Query: 223 SGPLGGDAQIAELILERQCRRVLFLEDPHVARQHEADIQLLERAA 267
           SGP+GGD Q+  LI E +   ++F  DP  A  H+ D++ L R A
Sbjct: 68  SGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLA 112


>ZmgsA [G] COG1803 Methylglyoxal synthase EcZ Escherichia coli O157:H7
           EDL933
          Length = 155

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 9/105 (8%)

Query: 163 IALIAHDAMKTRMLELAEKHFDVLDQFAFRCATGTTGGLLNQLAVKMKGEAGRNWVKPFL 222
           IAL+AHD  K  ++   E+H  +L+Q     ATGTTG L+++         G N V   L
Sbjct: 17  IALVAHDHCKQMLMSWVERHQPLLEQHVLY-ATGTTGNLISR-------ATGMN-VNAML 67

Query: 223 SGPLGGDAQIAELILERQCRRVLFLEDPHVARQHEADIQLLERAA 267
           SGP+GGD Q+  LI E +   ++F  DP  A  H+ D++ L R A
Sbjct: 68  SGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLA 112