BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0316.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2156 [S] COG1561 Uncharacterized stress-induced protein Rso R... 345 7e-95 NMB0711 [S] COG1561 Uncharacterized stress-induced protein Nme N... 221 2e-57 NMA0916 [S] COG1561 Uncharacterized stress-induced protein NmA N... 218 2e-56 XF1504 [S] COG1561 Uncharacterized stress-induced protein Xfa Xy... 211 1e-54 YPO0043 [S] COG1561 Uncharacterized stress-induced protein Ype Y... 211 2e-54 >RSc2156 [S] COG1561 Uncharacterized stress-induced protein Rso Ralstonia solanacearum Length = 311 Score = 345 bits (885), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 180/313 (57%), Positives = 228/313 (72%), Gaps = 14/313 (4%) Query: 3 IYSMTGYAVTTRET-----------TAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPMLR 51 I+SMTGY V TR+ TV++E ++VNSRFLDL FR ++ RA EP LR Sbjct: 2 IHSMTGYGVATRQAAFTDHSGAPCDNVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALR 61 Query: 52 EAIMGRLVRGKVECRLSFGRKVASGNSQALNHTLVGQLASLQDQLRAQFPDAAPLSINEL 111 E +M L RGK+ECR++ R+ A+G+ ALN ++ QLA+L+ ++ P A L + E+ Sbjct: 62 EMLMSALSRGKLECRINLQRQEAAGDVAALNVGVLQQLATLEQEVARHLPAAGSLRMGEV 121 Query: 112 LRWPGVMEEAEISQDTLQADILATMQQTLDAFVESRAREGAALQAVILARVDAMEAIVAR 171 LRWPGV+ E E++QD L+ + A ++ L +ESR REG AL+A++L RVDAM +IV Sbjct: 122 LRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRREGEALKAMLLERVDAMLSIVED 181 Query: 172 ITPLVPQLVEQFQQKATERMTEALGLALQTQNGAAPVATREESLERIRQEVTLYGIRIDI 231 + P+VP L++Q Q K TER+ EA GLA +G P TR+E ERIRQE T+YGIRIDI Sbjct: 182 LVPMVPNLIQQHQDKLTERLREAFGLA--APDG-TPALTRDELTERIRQEATVYGIRIDI 238 Query: 232 AEELARLSAHLGETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAVKELADASMELKL 291 AEEL+RL AHL ETRHIL+KGGQ+GKRLDFMMQELNREANT+GSKAA KELADASMELKL Sbjct: 239 AEELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKL 298 Query: 292 LIDQMREQVQNLE 304 LI+QMREQVQNLE Sbjct: 299 LIEQMREQVQNLE 311 >NMB0711 [S] COG1561 Uncharacterized stress-induced protein Nme Neisseria meningitidis MC58 Length = 294 Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 125/305 (40%), Positives = 180/305 (59%), Gaps = 17/305 (5%) Query: 1 LTIYSMTGYAVTTRETTAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPMLREAIMGRLVR 60 + I+SMTG+A E + + L++++VN RFLD+Q R+ DDLR +E +RE I + R Sbjct: 6 IHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKISSHIAR 65 Query: 61 GKVECRLSFGRKVASGNSQALNHTLVGQLASLQDQLRAQFPDAAPLSINELLRWPGVMEE 120 GKVEC++ S LN LVGQLA + LR + D A L + ++LR+PGV+ Sbjct: 66 GKVECKIQIQDAENGSQSLELNRDLVGQLAEINKDLR-KHHDLAKLGVADILRFPGVLAS 124 Query: 121 AEISQDTLQADILATMQQTLDAFVESRAREGAALQAVILARVDAMEAIVARITPLVPQLV 180 + + L I ++ L F +R REG L +L R++AME I+ ++ L P L+ Sbjct: 125 QRENTEELAKSITELTEKALKDFTAARKREGKKLGEHLLQRLEAMEEIIDALSELFPTLL 184 Query: 181 EQFQQKATERMTEALGLALQTQNGAAPVATREESLERIRQEVTLYGIRIDIAEELARLSA 240 E ++K R+ EA+G N +R++QE L+ + DI EE +RL Sbjct: 185 ETHKEKIRARLVEAVG---SIDN------------DRLQQEFALFIQKSDIDEEFSRLRT 229 Query: 241 HLGETRHIL-KKGGQVGKRLDFMMQELNREANTVGSKAAVKELADASMELKLLIDQMREQ 299 H+ E R I+ + G GKRLDF+MQELNREANT+GSK+ E AS+ELK+LI+QMREQ Sbjct: 230 HIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQ 289 Query: 300 VQNLE 304 VQN+E Sbjct: 290 VQNIE 294 >NMA0916 [S] COG1561 Uncharacterized stress-induced protein NmA Neisseria meningitidis Z2491 Length = 294 Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 123/305 (40%), Positives = 181/305 (59%), Gaps = 17/305 (5%) Query: 1 LTIYSMTGYAVTTRETTAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPMLREAIMGRLVR 60 + I+SMTG+A E + + L++++VN RFLD+Q R+ DDLR +E +RE I + R Sbjct: 6 IHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRMPDDLRYLESGIREKISSHIAR 65 Query: 61 GKVECRLSFGRKVASGNSQALNHTLVGQLASLQDQLRAQFPDAAPLSINELLRWPGVMEE 120 GKVEC++ S S LN LV QLA + LR + D A L + ++LR+PGV+ Sbjct: 66 GKVECKIQIQDTENSRQSLELNSDLVNQLAEINKNLR-KHHDLAKLGVADILRFPGVLAS 124 Query: 121 AEISQDTLQADILATMQQTLDAFVESRAREGAALQAVILARVDAMEAIVARITPLVPQLV 180 + + L I ++ L F +R REG L +L R+++ME I+ ++ L P L+ Sbjct: 125 QRENTEELAKSITELTEKALKDFTAARRREGKKLGEHLLQRLESMEEIIDALSELFPTLL 184 Query: 181 EQFQQKATERMTEALGLALQTQNGAAPVATREESLERIRQEVTLYGIRIDIAEELARLSA 240 E ++K R+ EA+G + + +R++QE L+ + DI EE +RL Sbjct: 185 ETHKEKIRARLVEAVG---------------DINNDRLQQEFALFIQKSDIDEEFSRLRT 229 Query: 241 HLGETRHIL-KKGGQVGKRLDFMMQELNREANTVGSKAAVKELADASMELKLLIDQMREQ 299 H+ E R I+ + G GKRLDF+MQELNREANT+GSK+ E AS+ELK+LI+QMREQ Sbjct: 230 HIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQ 289 Query: 300 VQNLE 304 VQN+E Sbjct: 290 VQNIE 294 >XF1504 [S] COG1561 Uncharacterized stress-induced protein Xfa Xylella fastidiosa 9a5c Length = 300 Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 121/302 (40%), Positives = 182/302 (60%), Gaps = 16/302 (5%) Query: 3 IYSMTGYAVTTRETTAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPMLREAIMGRLVRGK 62 I+SMT +A T G + E++SVN RFLD+ R+ ++LRA+EP LRE + R+ RGK Sbjct: 15 IHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALEPQLRERVAARVSRGK 74 Query: 63 VECRLSFGRKVASGNSQALNHTLVGQLASLQDQLRAQFPDAAPLSINELLRWPGVMEEAE 122 ++ + + +N L+ QL++L +L AQFP A ++ ELL+ PGV++ + Sbjct: 75 LDLTVRLSPQEIHTGKLVVNELLLSQLSTLALRLSAQFP-ALRVTFAELLQIPGVLKGEQ 133 Query: 123 ISQDTLQADILATMQQTLDAFVESRAREGAALQAVILARVDAMEAIVARITPLVPQLVEQ 182 I TLQ +A + + L+ F+ +R REG +QA+I R A+E IV + L+P + E Sbjct: 134 IDMATLQGHAVALLDKVLNNFIATREREGLKMQAMIAQRASAIERIVGEVRILIPTIREG 193 Query: 183 FQQKATERMTEALGLALQTQNGAAPVATREESLERIRQEVTLYGIRIDIAEELARLSAHL 242 K + RM L+ G RI QE+ L+ ++D+ EEL RLS+H+ Sbjct: 194 QHNKLSARMNH---LSYPVDPG------------RIEQELVLWLQKLDVDEELDRLSSHI 238 Query: 243 GETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAVKELADASMELKLLIDQMREQVQN 302 E IL++ VG+RLDF+MQE NREANT+GSK+ ++A++ELK+LIDQ+REQVQN Sbjct: 239 SELHRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQN 298 Query: 303 LE 304 +E Sbjct: 299 IE 300 >YPO0043 [S] COG1561 Uncharacterized stress-induced protein Ype Yersinia pestis Length = 287 Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 180/302 (59%), Gaps = 16/302 (5%) Query: 3 IYSMTGYAVTTRETTAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPMLREAIMGRLVRGK 62 I SMT YA + G E++SVN R+L+ R+ + R++EP++RE I RL RGK Sbjct: 2 IRSMTAYARRDIKGEWGNAAWELRSVNQRYLETYIRLPEQFRSLEPVIRERIRSRLTRGK 61 Query: 63 VECRLSFGRKVASGNSQALNHTLVGQLASLQDQLRAQFPDAAPLSINELLRWPGVMEEAE 122 +EC L F + +S LN L QL + ++ Q D ++ ++LRWPGVM E Sbjct: 62 IECHLRFELDANAQSSLILNEKLAKQLVEAGNWVKMQ-SDEGEINPVDILRWPGVMSAEE 120 Query: 123 ISQDTLQADILATMQQTLDAFVESRAREGAALQAVILARVDAMEAIVARITPLVPQLVEQ 182 D + +++ + LD F+ SR EGAAL+ +I R++ + A V ++ +P +++ Sbjct: 121 QDLDAISTELMQALDTALDDFIVSRETEGAALKTLIEQRLEGVSAEVVKVRAHMPNILQW 180 Query: 183 FQQKATERMTEALGLALQTQNGAAPVATREESLERIRQEVTLYGIRIDIAEELARLSAHL 242 +++ ++ EA +Q +N R+ QE+ L RID+AEEL RL AH+ Sbjct: 181 QRERLLNKLEEA---QVQLENT------------RLEQELVLMAQRIDVAEELDRLEAHV 225 Query: 243 GETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAVKELADASMELKLLIDQMREQVQN 302 ET +ILKK VG+RLDFMMQE NRE+NT+ SK+ E+ ++++ELK+LI+QMREQ+QN Sbjct: 226 KETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQN 285 Query: 303 LE 304 +E Sbjct: 286 IE 287