BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0307.p         (103 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA4674 [R] COG3093 Plasmid maintenance system antidote protein P...   103   1e-22
Cgl2962 [R] COG3093 Plasmid maintenance system antidote protein ...    98   6e-21
asl2923 [R] COG3093 Plasmid maintenance system antidote protein ...    94   6e-20
Cgl1005 [R] COG3093 Plasmid maintenance system antidote protein ...    94   1e-19
CC2867 Non COG                                                         82   2e-16

>PA4674 [R] COG3093 Plasmid maintenance system antidote protein Pae
          Pseudomonas aeruginosa
          Length = 101

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/95 (53%), Positives = 64/95 (67%)

Query: 5  SNRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARF 64
          +N MRPIHPGEILR+EFL   ++S  ALA AL V A  + +IV E+RGIS D A+RL R+
Sbjct: 3  TNGMRPIHPGEILRDEFLMEFDISPAALARALKVSAPTVNDIVREQRGISADMAIRLGRY 62

Query: 65 FGGDAQSWLNLQMTYDLKIAQRDHGARIEQEVRPL 99
          F   AQ W+NLQ  Y L  A   +G +IE E+ PL
Sbjct: 63 FDTSAQFWMNLQSEYSLATAYAANGKQIEHEIEPL 97


>Cgl2962 [R] COG3093 Plasmid maintenance system antidote protein Cgl
           Corynebacterium glutamicum
          Length = 121

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 5   SNRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARF 64
           +N  RP+ PGEILREEF+ P+ LS N LA A+ VP  RI EIV+ +R I+ DTALRLA +
Sbjct: 10  NNNDRPVMPGEILREEFMEPLGLSQNGLARAIGVPPRRINEIVHGKRAITADTALRLAAY 69

Query: 65  FGGDAQSWLNLQMTYDLKIAQRDHGARIEQEVRPLER 101
            G D Q WLNLQ  YDL +   D    +E  ++P +R
Sbjct: 70  LGPDPQFWLNLQTHYDLSVTYLDARTLLE-AIKPYDR 105


>asl2923 [R] COG3093 Plasmid maintenance system antidote protein Nos
          Nostoc sp. PCC 7120
          Length = 97

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 10 PIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARFFGGDA 69
          PIHPGEIL +E +  + ++A+ LA  LHVP  RI EI+N RRGI+ DTALRL ++FG   
Sbjct: 5  PIHPGEILADE-ITELAMTASDLARVLHVPKNRITEIINGRRGITADTALRLGQYFGTGG 63

Query: 70 QSWLNLQMTYDLKIAQRDHGARIEQEVRP 98
          + WLNLQ  Y+L++A++  G  I++ + P
Sbjct: 64 EFWLNLQKNYELRLAEQTSGKEIQETICP 92


>Cgl1005 [R] COG3093 Plasmid maintenance system antidote protein Cgl
           Corynebacterium glutamicum
          Length = 99

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 10  PIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARFFGGDA 69
           PIHPGEIL E+F+    L+ N +A+++ VP  RI EIV+ +R I+ DTALRL R+FG D 
Sbjct: 8   PIHPGEILMEDFIKGFGLTQNKVAVSIGVPPRRINEIVHGKRSITADTALRLGRYFGIDP 67

Query: 70  QSWLNLQMTYDLKIAQRDHGARIEQEVRPLE 100
           Q WL+LQ  Y+L++  RD GA    ++ PL+
Sbjct: 68  QFWLSLQTQYELEL-DRDAGAATYAQITPLK 97


>CC2867 Non COG
          Length = 104

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 55/82 (67%)

Query: 5  SNRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARF 64
          ++ + P+HPGEIL EEFL P  L+   +A  LH+   RI ++V  +  ++ DTALRL R 
Sbjct: 9  NDPLAPVHPGEILLEEFLKPYGLTPGRVATRLHIARPRIEKLVRGQTPVTIDTALRLERL 68

Query: 65 FGGDAQSWLNLQMTYDLKIAQR 86
          FG  AQ WLNLQ  YDL++A+R
Sbjct: 69 FGASAQFWLNLQNRYDLEMAKR 90