BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0244.p (303 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1423 [O] COG0330 Membrane protease subunits, stomatin/prohibi... 483 e-136 NMA1382 [O] COG0330 Membrane protease subunits, stomatin/prohibi... 413 e-115 NMB1220 [O] COG0330 Membrane protease subunits, stomatin/prohibi... 412 e-115 RP328 [O] COG0330 Membrane protease subunits, stomatin/prohibiti... 334 1e-91 RC0452 [O] COG0330 Membrane protease subunits, stomatin/prohibit... 332 7e-91 >RSc1423 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Rso Ralstonia solanacearum Length = 308 Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/302 (76%), Positives = 275/302 (91%) Query: 2 LGSVTLVIFFLAIVFVVQTVKVVPQQHAWVVERLGKYHATLAPGLNIVVPFIDRVAYKHI 61 LG++ L++ F AIV + Q++K+VPQQHAW++ERLGKYHATL+PGLNIV+PF+DRVAYKH+ Sbjct: 4 LGTLALIVLFAAIVLIAQSIKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAYKHV 63 Query: 62 LKEIPLDVPPQVCITKDNTQLQVDGILYFQITDPMRASYGSSNYIAAITQLAQTTLRSVI 121 LKEIPLDVP Q+CITKDNTQLQVDGILYFQ+TDPMRASYGSSN++ AITQLAQTTLRSV+ Sbjct: 64 LKEIPLDVPSQICITKDNTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLRSVV 123 Query: 122 GKMELDKTFEERDHINTAIVSAIDESAENWGVKVLRYEIKDLTPPKEILHAMQAQITAER 181 GK+ELDKTFEER+ IN ++V+A+DE+A NWGVKVLRYEIKDLTPPKEILHAMQAQITAER Sbjct: 124 GKLELDKTFEEREFINHSVVNALDEAASNWGVKVLRYEIKDLTPPKEILHAMQAQITAER 183 Query: 182 EKRALIAASEGRKQEQINIATGEREAAIARSEGEKQASINRAEGQAAAILAIAEASAEAI 241 EKRALIAASEG++QEQIN+A G REAAI +SEGEKQA+INRA+G+AAAILA+AEA+A+AI Sbjct: 184 EKRALIAASEGKRQEQINLAAGAREAAIQKSEGEKQAAINRAQGEAAAILAVAEANAQAI 243 Query: 242 RKTAAAIEQPGGSDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLADMSGLIASALQVVKQ 301 +K AI GG DAVNLKVAE+YV AFG LAK N++IVP NL D+S +IASALQ+VKQ Sbjct: 244 QKVGHAIRTEGGIDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNLGDLSTMIASALQIVKQ 303 Query: 302 QK 303 Q+ Sbjct: 304 QR 305 >NMA1382 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs NmA Neisseria meningitidis Z2491 Length = 315 Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/308 (64%), Positives = 248/308 (80%), Gaps = 11/308 (3%) Query: 7 LVIFFLAIVFVVQTVKVVPQQHAWVVERLGKYHATLAPGLNIVVPFIDRVAYKHILKEIP 66 +++ +VF ++ V+PQQ VVERLG++H L GLNI++PFIDRVAY+H LKEIP Sbjct: 5 IILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEIP 64 Query: 67 LDVPPQVCITKDNTQLQVDGILYFQITDPMRASYGSSNYIAAITQLAQTTLRSVIGKMEL 126 LDVP QVCIT+DNTQL VDGI+YFQ+TDP ASYGSSNYI AITQLAQTTLRSVIG+MEL Sbjct: 65 LDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMEL 124 Query: 127 DKTFEERDHINTAIVSAIDESAENWGVKVLRYEIKDLTPPKEILHAMQAQITAEREKRAL 186 DKTFEERD IN+ +VSA+DE+A WGVKVLRYEIKDL PP+EIL +MQAQITAEREKRA Sbjct: 125 DKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR 184 Query: 187 IAASEGRKQEQINIATGEREAAIARSEGEKQAS-----------INRAEGQAAAILAIAE 235 IA SEGRK EQIN+A+G+REA I +SEGE QA+ INRA+G+A ++ +AE Sbjct: 185 IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAE 244 Query: 236 ASAEAIRKTAAAIEQPGGSDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLADMSGLIASA 295 A+AEAIR+ AAA++ GG+DAVNLK+AEQYV AF LAK +N++I+PAN+AD+ LI++ Sbjct: 245 ANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAG 304 Query: 296 LQVVKQQK 303 ++++ K Sbjct: 305 MKIIDSSK 312 >NMB1220 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Nme Neisseria meningitidis MC58 Length = 315 Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/309 (64%), Positives = 249/309 (80%), Gaps = 12/309 (3%) Query: 7 LVIFFLAI-VFVVQTVKVVPQQHAWVVERLGKYHATLAPGLNIVVPFIDRVAYKHILKEI 65 +I +A+ VF ++ V+PQQ VVERLG++H L GLNI++PFIDRVAY+H LKEI Sbjct: 4 FIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSLKEI 63 Query: 66 PLDVPPQVCITKDNTQLQVDGILYFQITDPMRASYGSSNYIAAITQLAQTTLRSVIGKME 125 PLDVP QVCIT+DNTQL VDGI+YFQ+TDP ASYGSSNYI AITQLAQTTLRSVIG+ME Sbjct: 64 PLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRME 123 Query: 126 LDKTFEERDHINTAIVSAIDESAENWGVKVLRYEIKDLTPPKEILHAMQAQITAEREKRA 185 LDKTFEERD IN+ +V+A+DE+A WGVKVLRYEIKDL PP+EIL +MQAQITAEREKRA Sbjct: 124 LDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRA 183 Query: 186 LIAASEGRKQEQINIATGEREAAIARSEGEKQAS-----------INRAEGQAAAILAIA 234 IA SEGRK EQIN+A+G+REA I +SEGE QA+ INRA+G+A ++ +A Sbjct: 184 RIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVA 243 Query: 235 EASAEAIRKTAAAIEQPGGSDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLADMSGLIAS 294 EA+AEAIR+ AAA++ GG+DAVNLK+AEQYV AF LAK +N++I+PAN+AD+ LI++ Sbjct: 244 EANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISA 303 Query: 295 ALQVVKQQK 303 ++++ K Sbjct: 304 GMKIIDSSK 312 >RP328 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Rpr Rickettsia prowazekii Length = 311 Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 163/298 (54%), Positives = 215/298 (72%), Gaps = 1/298 (0%) Query: 7 LVIF-FLAIVFVVQTVKVVPQQHAWVVERLGKYHATLAPGLNIVVPFIDRVAYKHILKEI 65 L+IF + I+ ++Q VKVVPQQ AWVVE+LGK+ L PGLN+++P I RVAYKH LKE Sbjct: 5 LLIFSIITILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPIIQRVAYKHTLKEE 64 Query: 66 PLDVPPQVCITKDNTQLQVDGILYFQITDPMRASYGSSNYIAAITQLAQTTLRSVIGKME 125 +DV Q I+ DN L +DG+LY +I DPM ASYG +N AITQLAQTT+RS IGK+ Sbjct: 65 AIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLP 124 Query: 126 LDKTFEERDHINTAIVSAIDESAENWGVKVLRYEIKDLTPPKEILHAMQAQITAEREKRA 185 LD+TFEERD +N AIVSAI+++A NWG++ +RYEIKD+ PP+ IL AM+ Q+ AER+KRA Sbjct: 125 LDRTFEERDTLNVAIVSAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAERQKRA 184 Query: 186 LIAASEGRKQEQINIATGEREAAIARSEGEKQASINRAEGQAAAILAIAEASAEAIRKTA 245 I SEG +Q +IN A GE+ + SE +NRA+G+A AI +A A+A +I A Sbjct: 185 QILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSIEIVA 244 Query: 246 AAIEQPGGSDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLADMSGLIASALQVVKQQK 303 AAI++ GGSDAV LK+AEQY+ AFG LAK N++I+P NL++ S + AL + Q K Sbjct: 245 AAIQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPTNLSEPSSFVTGALTIFNQLK 302 >RC0452 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Rco Rickettsia conorii Length = 312 Score = 332 bits (851), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 162/298 (54%), Positives = 216/298 (72%), Gaps = 1/298 (0%) Query: 7 LVIF-FLAIVFVVQTVKVVPQQHAWVVERLGKYHATLAPGLNIVVPFIDRVAYKHILKEI 65 L+IF +AI+ ++Q VKVVPQQ AWVVE+LGK+ L PGLN+++P I RVAYKH LKE Sbjct: 5 LLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHTLKEE 64 Query: 66 PLDVPPQVCITKDNTQLQVDGILYFQITDPMRASYGSSNYIAAITQLAQTTLRSVIGKME 125 +DV Q I+ DN L +DG+LY +I DPM ASYG +N AITQLAQTT+RS IGK+ Sbjct: 65 AIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLP 124 Query: 126 LDKTFEERDHINTAIVSAIDESAENWGVKVLRYEIKDLTPPKEILHAMQAQITAEREKRA 185 LD+TFEER+ +N AIV+AI+++A NWG++ +RYEIKD+ PP+ IL AM+ Q+ AER+KRA Sbjct: 125 LDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAERQKRA 184 Query: 186 LIAASEGRKQEQINIATGEREAAIARSEGEKQASINRAEGQAAAILAIAEASAEAIRKTA 245 I SEG +Q +IN A GE+ + SE +NRA+G+A AI +A A+A +I A Sbjct: 185 QILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSIEIVA 244 Query: 246 AAIEQPGGSDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLADMSGLIASALQVVKQQK 303 A+++ GGSDAV LK+AEQY+ AFG LAK N++I+PANL++ S I AL + Q K Sbjct: 245 TAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQLK 302