BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0214.p         (167 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0547 [GEPR] COG0477 Permeases of the major facilitator superf...   220   9e-58
PA3709 [GEPR] COG0477 Permeases of the major facilitator superfa...   206   2e-53
mlr0338 [GEPR] COG0477 Permeases of the major facilitator superf...   200   1e-51
SMc04407 [GEPR] COG0477 Permeases of the major facilitator super...   197   9e-51
BMEII0406 [GEPR] COG0477 Permeases of the major facilitator supe...   187   7e-48

>RSc0547 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 567

 Score =  220 bits (561), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 122/132 (92%)

Query: 13  ITPEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFAGTDPNTAFIFALLAFAAGFIV 72
           +T EEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFF+G DP  AFIFALLAFAAGF+V
Sbjct: 20  MTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDPTAAFIFALLAFAAGFLV 79

Query: 73  RPFGALVFGRLGDLVGRKYTFLVTILIMGASTFIVGVLPNYNSIGITAPIILIILRILQG 132
           RPFGALVFGRLGD++GRKYTFL+TILIMG STFIVG+LP+Y +IG  AP+ILI+LR+LQG
Sbjct: 80  RPFGALVFGRLGDMIGRKYTFLITILIMGTSTFIVGLLPSYTTIGAAAPVILIMLRLLQG 139

Query: 133 LALGGDPGGSXT 144
           LALGG+ GG+ T
Sbjct: 140 LALGGEYGGAAT 151


>PA3709 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
           Pseudomonas aeruginosa
          Length = 539

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/159 (67%), Positives = 126/159 (79%), Gaps = 10/159 (6%)

Query: 9   TARGITP-EEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFAGTDPNTAFIFALLAFA 67
           T    TP EE+KVIFASSLGTVFEWYDF+LYG+LAA+I+KQFFAG +  TAFIFAL+AFA
Sbjct: 11  TVPATTPQEERKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFA 70

Query: 68  AGFIVRPFGALVFGRLGDLVGRKYTFLVTILIMGASTFIVGVLPNYNSIGITAPIILIIL 127
           AGF+VRPFGALVFGRLGD++GRKYTFLVTIL+MG STF VG+LP Y SIG+ APIIL+ L
Sbjct: 71  AGFLVRPFGALVFGRLGDMIGRKYTFLVTILLMGLSTFAVGLLPTYASIGVAAPIILVTL 130

Query: 128 RILQGLALGGDPGGS---------XTGAGAFPSWYPSCC 157
           R+LQGLALGG+ GG+             G++ SW  S  
Sbjct: 131 RMLQGLALGGEYGGAAIYVAEHAPANKRGSYTSWIQSTA 169


>mlr0338 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 629

 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/137 (75%), Positives = 118/137 (86%), Gaps = 1/137 (0%)

Query: 9   TARGITPEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFAGTDPN-TAFIFALLAFA 67
           T+RG+T EEKKVIFASSLGTVFEWYDFYLYGSLAA I   FF+ T P  T  IFALLAFA
Sbjct: 10  TSRGMTREEKKVIFASSLGTVFEWYDFYLYGSLAAFIGSTFFSPTIPEATRNIFALLAFA 69

Query: 68  AGFIVRPFGALVFGRLGDLVGRKYTFLVTILIMGASTFIVGVLPNYNSIGITAPIILIIL 127
           AGF+VRPFGALVFGR+GDLVGRKYTFLVT+ IMG STF+VG+LP Y ++GI AP+ILI L
Sbjct: 70  AGFLVRPFGALVFGRIGDLVGRKYTFLVTMTIMGLSTFLVGLLPGYATLGIAAPVILIAL 129

Query: 128 RILQGLALGGDPGGSXT 144
           R+LQGLALGG+ GG+ T
Sbjct: 130 RMLQGLALGGEYGGAAT 146


>SMc04407 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 629

 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 106/137 (77%), Positives = 113/137 (82%)

Query: 8   TTARGITPEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFAGTDPNTAFIFALLAFA 67
           T A  +T EEKKVIFASSLGTVFEWYDFYLYGSLA  I   FF+     T  IFALLAFA
Sbjct: 10  TKAGPMTGEEKKVIFASSLGTVFEWYDFYLYGSLAVYIGATFFSQYPETTRNIFALLAFA 69

Query: 68  AGFIVRPFGALVFGRLGDLVGRKYTFLVTILIMGASTFIVGVLPNYNSIGITAPIILIIL 127
           AGF+VRPFGALVFGRLGDLVGRKYTFLVTILIMG STF+VGVLP   SIGI APIILI L
Sbjct: 70  AGFLVRPFGALVFGRLGDLVGRKYTFLVTILIMGVSTFLVGVLPGAASIGIAAPIILIAL 129

Query: 128 RILQGLALGGDPGGSXT 144
           R+LQGLALGG+ GG+ T
Sbjct: 130 RLLQGLALGGEYGGAAT 146


>BMEII0406 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
           Brucella melitensis
          Length = 632

 Score =  187 bits (476), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 111/134 (82%)

Query: 11  RGITPEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFAGTDPNTAFIFALLAFAAGF 70
           + +T EE+KVIFASSLGTVFEWYDFYLYG+LA+ I   FF      T  IF LLAFAAGF
Sbjct: 12  QKMTGEERKVIFASSLGTVFEWYDFYLYGTLASFIGAAFFNEYPEATRNIFVLLAFAAGF 71

Query: 71  IVRPFGALVFGRLGDLVGRKYTFLVTILIMGASTFIVGVLPNYNSIGITAPIILIILRIL 130
           +VRPFGALVFGR+GDLVGRKYTFLVTI+IMG STF+VG+LP   S+GI APIILI LR+L
Sbjct: 72  VVRPFGALVFGRIGDLVGRKYTFLVTIVIMGGSTFLVGLLPGSASLGIFAPIILIALRML 131

Query: 131 QGLALGGDPGGSXT 144
           QGLALGG+ GG+ T
Sbjct: 132 QGLALGGEYGGAAT 145