BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0201.p (306 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1720_1 [S] COG0062 Uncharacterized conserved protein Rso Rals... 133 4e-31 ECs5142_1 [S] COG0062 Uncharacterized conserved protein Ecs Esch... 103 7e-22 yjeF_1 [S] COG0062 Uncharacterized conserved protein Eco Escheri... 100 5e-21 ZyjeF_1 [S] COG0062 Uncharacterized conserved protein EcZ Escher... 100 6e-21 STM4356_1 [S] COG0062 Uncharacterized conserved protein Sty Salm... 91 3e-18 >RSc1720_1 [S] COG0062 Uncharacterized conserved protein Rso Ralstonia solanacearum Length = 240 Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/205 (43%), Positives = 115/205 (56%), Gaps = 11/205 (5%) Query: 4 LHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNGG 63 L A +R +E AA AL P+TLM RAG A A+ Q A +L++AGPGNNGG Sbjct: 25 LFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQ-----ARAPRGHLLLVAGPGNNGG 79 Query: 64 DALEAACLLEEAGIEVSVQLHADESRQPADARRALARAREAE--LEFIEGTGDVPLRARS 121 DAL AA L EAG V+V L AD +R P DARRA AR A +E + VP + Sbjct: 80 DALVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAAHVPIEILHAPASVPATVTA 139 Query: 122 WALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAV 181 ++DGLFGIGL RP ++E +N P ++D+PSGL+ DTG V V Sbjct: 140 ---IVDGLFGIGLARPLAGLHAALVETLNGSGLPAYALDIPSGLSGDTGQPPAPDSPV-V 195 Query: 182 QATHTLSFIGDKPGLHTCDGSDHSG 206 +A TL+F+ KPGL T G D +G Sbjct: 196 RARATLTFLVAKPGLLTGAGRDATG 220 >ECs5142_1 [S] COG0062 Uncharacterized conserved protein Ecs Escherichia coli O157:H7 Length = 214 Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 111/206 (53%), Gaps = 21/206 (10%) Query: 9 EIRQVEQAALSAL--PPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNGGDAL 66 +IR+ E+ A AL Y LM RAG E A Q+ S + LVL G GNNGGD Sbjct: 22 DIRRGEREAADALGLTLYELMLRAG----EAAFQVCRSAYPDARHWLVLCGHGNNGGDGY 77 Query: 67 EAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSW---- 122 A L + GIEV+ L A ES +P ALAR EA ++ G++ W Sbjct: 78 VVARLAKAVGIEVT--LLAQESDKPLPEEAALAR--EA---WLNAGGEIHASNIVWPESV 130 Query: 123 ALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQ 182 AL++D L G GL + P ++ +I++ NS P++++D+PSGL A+TG+ G + Sbjct: 131 ALIVDALLGTGLQQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGAT----PGAVIN 186 Query: 183 ATHTLSFIGDKPGLHTCDGSDHSGQI 208 A HT++FI KPGL T D +GQ+ Sbjct: 187 ADHTITFIALKPGLLTGKARDVTGQL 212 >yjeF_1 [S] COG0062 Uncharacterized conserved protein Eco Escherichia coli K12 Length = 214 Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 19/199 (9%) Query: 14 EQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNGGDALEAACLLE 73 E A + L Y LM RAG E A Q+ S + LVL G GNNGGD A L + Sbjct: 29 EAADVLGLTLYELMLRAG----EAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAK 84 Query: 74 EAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSW----ALVIDGL 129 GIEV+ L A ES +P ALAR EA ++ G++ W L++D L Sbjct: 85 AVGIEVT--LLAQESDKPLPEEAALAR--EA---WLNAGGEIHASNIVWPESVDLIVDAL 137 Query: 130 FGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQATHTLSF 189 G GL + P ++ +I++ NS P++++D+PSGL A+TG+ G + A HT++F Sbjct: 138 LGTGLRQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGAT----PGAVINADHTITF 193 Query: 190 IGDKPGLHTCDGSDHSGQI 208 I KPGL T D +GQ+ Sbjct: 194 IALKPGLLTGKARDVTGQL 212 >ZyjeF_1 [S] COG0062 Uncharacterized conserved protein EcZ Escherichia coli O157:H7 EDL933 Length = 214 Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 21/206 (10%) Query: 9 EIRQVEQAALSAL--PPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNGGDAL 66 +IR+ E+ A AL Y LM RAG E A Q+ S + LVL G GNNGGD Sbjct: 22 DIRRGEREAADALGLTLYELMLRAG----EAAFQVCRSAYPDARHWLVLCGHGNNGGDGY 77 Query: 67 EAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSW---- 122 A L + GIEV+ L A ES +P ALAR EA ++ G++ W Sbjct: 78 VVARLAKAVGIEVT--LLAQESDKPLPEEAALAR--EA---WLNAGGEIHASNIVWPESV 130 Query: 123 ALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQ 182 AL++D L G GL + P ++ +I++ S P++++D+PSGL A+TG+ G + Sbjct: 131 ALIVDALLGTGLQQAPRESISQLIDHAXSHPAPIVAVDIPSGLLAETGAT----PGAVIN 186 Query: 183 ATHTLSFIGDKPGLHTCDGSDHSGQI 208 A HT++FI KPGL T D +GQ+ Sbjct: 187 ADHTITFIALKPGLLTGKARDVTGQL 212 >STM4356_1 [S] COG0062 Uncharacterized conserved protein Sty Salmonella typhimurium LT2 Length = 221 Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 106/210 (50%), Gaps = 13/210 (6%) Query: 9 EIRQVEQAALSA--LPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNGGDAL 66 +I+++E+ A A L Y LM RAG A A+ T LVL G GNNGGD Sbjct: 22 DIKRLERDAADAFGLTLYELMLRAGDAAFRVARDSYPDTR----HWLVLCGHGNNGGDGY 77 Query: 67 EAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSWALVI 126 A L + AGI SV L A ES +P A AR I D+ + + L+I Sbjct: 78 VVARLAQAAGI--SVTLLAQESDKPLPEEAAQARDAWLNAGGIIHAADI-IWPEATDLII 134 Query: 127 DGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQATHT 186 D L G G+ + P + +IE N+ PV+++D+PSGL A TG+ G + A HT Sbjct: 135 DALLGTGIAQAPRDPVAGLIEQANAHPAPVVAVDIPSGLLAQTGA----TPGAVISAAHT 190 Query: 187 LSFIGDKPGLHTCDGSDHSGQIVVDALEID 216 ++FI KPGL T D +G + DAL ++ Sbjct: 191 VTFIALKPGLLTGKARDVTGILHYDALGLE 220