BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0193.p         (94 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF2450 [T] COG0271 Stress-induced morphogen (activity unknown) X...    75   3e-14
SMc00698 [T] COG0271 Stress-induced morphogen (activity unknown)...    74   1e-13
NMA2143 [T] COG0271 Stress-induced morphogen (activity unknown) ...    67   9e-12
NMB0344 [T] COG0271 Stress-induced morphogen (activity unknown) ...    67   9e-12
BMEI0045 [T] COG0271 Stress-induced morphogen (activity unknown)...    66   2e-11

>XF2450 [T] COG0271 Stress-induced morphogen (activity unknown) Xfa
          Xylella fastidiosa 9a5c
          Length = 96

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 53/84 (63%)

Query: 4  ADTRVQRITERLTATFSPQVCLVEDESALHAGHAGAASGGGHYRIRLVSDLFAGKNRLNR 63
          A  RV++I   L   F+P    V+DES  H GH+GA  G GH+ + +V+ +FAGK  L R
Sbjct: 6  AVNRVEQIQIVLGDAFAPSRLEVKDESDRHIGHSGARDGRGHFSVLIVTPMFAGKTLLAR 65

Query: 64 HRLVYDCLSDLMQQEIHALAIVAL 87
          HR VY  L  +M+ +IHAL+I AL
Sbjct: 66 HRAVYAALGSMMETDIHALSIQAL 89


>SMc00698 [T] COG0271 Stress-induced morphogen (activity unknown) Sme
          Sinorhizobium meliloti
          Length = 93

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 9  QRITERLTATFSPQVCLVEDESALHAGHAGAASGGG--HYRIRLVSDLFAGKNRLNRHRL 66
          +RI E+LT  F P+  +V +ES  HAGH     GGG  H R+R+VS  F G +R+ RHR 
Sbjct: 5  RRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRA 64

Query: 67 VYDCLSDLMQQEIHALAIVALSPSEAT 93
          + D L   +   +HALA+   +P EAT
Sbjct: 65 INDLLKPELDAGLHALAVEPAAPGEAT 91


>NMA2143 [T] COG0271 Stress-induced morphogen (activity unknown) NmA
          Neisseria meningitidis Z2491
          Length = 92

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 8  VQRITERLTATFSPQVCLVEDESALHAGHAGAASGGGHYRIRLVSDLFAGKNRLNRHRLV 67
          V  I ERL  T  P V  + DES LH GHAG  +GGGHY + +VS  F G +RLNR + V
Sbjct: 4  VDLIRERLQ-TLDPLVLEIGDESHLHKGHAGN-TGGGHYAVLVVSGRFEGVSRLNRQKTV 61

Query: 68 YDCLSDLMQQE-IHALAIVALSPSE 91
             L DL     IHAL I A +P E
Sbjct: 62 KSLLKDLFSDGIIHALGIRAAAPDE 86


>NMB0344 [T] COG0271 Stress-induced morphogen (activity unknown) Nme
          Neisseria meningitidis MC58
          Length = 92

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 8  VQRITERLTATFSPQVCLVEDESALHAGHAGAASGGGHYRIRLVSDLFAGKNRLNRHRLV 67
          V  I ERL  T  P V  + DES LH GHAG  +GGGHY + +VS  F G +RLNR + V
Sbjct: 4  VDLIRERLQ-TLDPLVLEIGDESHLHKGHAGN-TGGGHYAVLVVSGRFEGVSRLNRQKTV 61

Query: 68 YDCLSDLMQQE-IHALAIVALSPSE 91
             L DL     IHAL I A +P E
Sbjct: 62 KSLLKDLFSGGMIHALGIRAATPDE 86


>BMEI0045 [T] COG0271 Stress-induced morphogen (activity unknown) Bme
          Brucella melitensis
          Length = 102

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 9/97 (9%)

Query: 5  DTRVQRITERLTATFSPQVCLVEDESALHAGH---------AGAASGGGHYRIRLVSDLF 55
          +++   +  +LTA F+P+   V +ES LHAGH             +G  H+RIR+V++ F
Sbjct: 3  NSKQSSMEAKLTAAFAPEKLEVINESRLHAGHHRDGGHEDDTYDGAGETHFRIRIVAEAF 62

Query: 56 AGKNRLNRHRLVYDCLSDLMQQEIHALAIVALSPSEA 92
           G +R+ RHR + D L + ++  +HALA+   +P EA
Sbjct: 63 TGMSRVQRHRAINDLLKEELESGVHALALEPSAPGEA 99