BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0186.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 295 5e-80 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 237 2e-62 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 191 1e-48 AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport... 171 1e-42 mll4886 Non COG 169 6e-42 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 149/247 (60%), Positives = 190/247 (76%), Gaps = 1/247 (0%) Query: 1 MTASLP-LVLQDVHKAFDRSEILRGVDLQLQPGERCALIGPNGAGKSSLFHVVSGRYRAD 59 M+ +P L L+DV K F +EI+RGV+L + GER ALIGPNGAGKS+ F+++SGR+ Sbjct: 1 MSQPIPALELRDVRKRFGATEIIRGVNLTIGRGERHALIGPNGAGKSTTFNLISGRFAPS 60 Query: 60 AGRVLLHGRDITREPPQQIHRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRR 119 AG V L+G +I P +I+R GL+RSFQIT++F RLS FEN+RCA+LW+LGY+Y+FW R Sbjct: 61 AGSVRLNGEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYSFWHR 120 Query: 120 IGQLRDASERALSVLDKVGLAKRAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAG 179 + +LRDA ERA +VL+++GL R + AAG L+YAEQRALE+ +TIA A VILLDEPTAG Sbjct: 121 LAELRDARERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDEPTAG 180 Query: 180 MSRAESAAMVALIREVTVGKTLLMVEHDMQVVFGLADRIAVMDNGRVIACASAERIRANP 239 MSR+ES V LIR+VTVGKTL+MVEHDM VVFGLADRI+V+ G VIA + E IR N Sbjct: 181 MSRSESDHAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIRNNR 240 Query: 240 DVQALYL 246 V+ YL Sbjct: 241 RVKEAYL 247 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/245 (46%), Positives = 167/245 (68%) Query: 7 LVLQDVHKAFDRSEILRGVDLQLQPGERCALIGPNGAGKSSLFHVVSGRYRADAGRVLLH 66 LVL ++K+F + I+RGV+L ++ GER A+IGPNGAGKS+LFH++SG + +G + Sbjct: 7 LVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSGSIRFQ 66 Query: 67 GRDITREPPQQIHRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRIGQLRDA 126 G +I P ++R GLARSFQIT++FP L+ FEN+R A++ ++ FWR + +R Sbjct: 67 GEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVSSMRKV 126 Query: 127 SERALSVLDKVGLAKRAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAESA 186 + S+L++V L RA A +LSY+EQR+LE+ +T+A+D +I+LDEP AGMS+ E+ Sbjct: 127 TAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMSQEETD 186 Query: 187 AMVALIREVTVGKTLLMVEHDMQVVFGLADRIAVMDNGRVIACASAERIRANPDVQALYL 246 V LIRE+T +TL++VEHDM VVF LADRI+V+ G +IA + + IR N V+ YL Sbjct: 187 YTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARVREAYL 246 Query: 247 DRRPH 251 H Sbjct: 247 GEEAH 251 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/246 (41%), Positives = 148/246 (60%) Query: 1 MTASLPLVLQDVHKAFDRSEILRGVDLQLQPGERCALIGPNGAGKSSLFHVVSGRYRADA 60 M + L + + KAF + V+L+++ G ALIGPNGAGK++ F++++ Sbjct: 1 MAQDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTR 60 Query: 61 GRVLLHGRDITREPPQQIHRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRI 120 G +L +G DIT E P QI R G+ RSFQI+++FP LS ENVR L LG YAFWR Sbjct: 61 GTILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSE 120 Query: 121 GQLRDASERALSVLDKVGLAKRAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGM 180 L ++RA+ +LD+VGL A EL Y +RALE+A T+A + ++LLDEPT GM Sbjct: 121 KTLAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGM 180 Query: 181 SRAESAAMVALIREVTVGKTLLMVEHDMQVVFGLADRIAVMDNGRVIACASAERIRANPD 240 + + LI+ V G+T+LMVEH+M VV +AD+I V+ G+++A E + NP Sbjct: 181 GHEDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQ 240 Query: 241 VQALYL 246 V Y+ Sbjct: 241 VMEAYM 246 >AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 268 Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 134/233 (57%) Query: 14 KAFDRSEILRGVDLQLQPGERCALIGPNGAGKSSLFHVVSGRYRADAGRVLLHGRDITRE 73 K F ++ VDL + ALIGPNGAGK+++F++++ + G + G DIT+ Sbjct: 31 KTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAITFMGTDITKT 90 Query: 74 PPQQIHRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRIGQLRDASERALSV 133 PP ++ RLGL RSFQI+++FP L+ ENVR AL FW + L + RA + Sbjct: 91 PPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQFWLPLSSLDRLNARAEEL 150 Query: 134 LDKVGLAKRAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAESAAMVALIR 193 + VGL + A +LSY +R LE+A T+A D V+LLDEP AGM + + + LIR Sbjct: 151 ISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGGEDVSHVAELIR 210 Query: 194 EVTVGKTLLMVEHDMQVVFGLADRIAVMDNGRVIACASAERIRANPDVQALYL 246 EV + +LMVEH+++VV + + V+ G ++A + A+P V+ Y+ Sbjct: 211 EVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVRTAYM 263 >mll4886 Non COG Length = 241 Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 93/227 (40%), Positives = 137/227 (60%), Gaps = 9/227 (3%) Query: 25 VDLQLQPGERCALIGPNGAGKSSLFHVVSGRYRADAGRVLLHGRDITREPPQQIHRLGLA 84 VD L PGE A+IGPNGAGK++ +VSGR + +G ++ G DIT P R G+A Sbjct: 23 VDFTLMPGEIRAVIGPNGAGKTTFVSMVSGRIQPSSGAIVFDGADITSLPAYVRVRQGIA 82 Query: 85 RSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRIGQLRDASERA-LSVLDKVGLAKRA 143 +FQITS++ LS + NV + TL R G + A + A ++ L++ GLA RA Sbjct: 83 YTFQITSIYANLSVYANVALPVQLTL--------RHGPSKSAIQAAVMTALERTGLADRA 134 Query: 144 EVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAESAAMVALIREVTVGKTLLM 203 + AG+LSY QR LE+A+ +A +++LDEPT G++ +E + L+R++ T+L+ Sbjct: 135 HMPAGQLSYGHQRLLEVAMGLALKPRLLILDEPTQGLADSEIDNFIVLVRDIASSATVLL 194 Query: 204 VEHDMQVVFGLADRIAVMDNGRVIACASAERIRANPDVQALYLDRRP 250 +EH+M VV LADRI V + G+++A + E IR N VQ YL P Sbjct: 195 IEHNMPVVMQLADRITVFNAGKILAEGTPEAIRENAAVQEAYLGTAP 241