BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0185.p (238 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 277 2e-74 BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transpo... 226 3e-59 SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 190 2e-48 AF0822 [E] COG0410 ABC-type branched-chain amino acid transport ... 180 2e-45 PA1070 [E] COG0410 ABC-type branched-chain amino acid transport ... 179 6e-45 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 133/237 (56%), Positives = 174/237 (73%), Gaps = 1/237 (0%) Query: 1 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 60 M ++ +L + GL A+YG+SH+LHGV L V GEIV++LGRNG GRSTL K++MG VR Sbjct: 1 MAATTPMLEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRCE 60 Query: 61 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPV-PDDGWREE 119 G I + + GL T+ +A RG+GYVPE+RD+FP LTV+QNLLLG K P P W+ + Sbjct: 61 GHILLRGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNPRQPRPRWQFD 120 Query: 120 EVLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAH 179 ++ LFP L+ R AG LSGGEQQML L R LMG+P ++IDEPTEGL+P +V QV Sbjct: 121 DMYRLFPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVAQVGE 180 Query: 180 YLELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 236 YL+ L+ R ++VLL+EQK A+AL++SQRVYVMG G++VF GTPA L AD ++QEWL Sbjct: 181 YLKTLKARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEWL 237 >BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 238 Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/233 (47%), Positives = 162/233 (69%), Gaps = 1/233 (0%) Query: 7 LLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST-GEIDF 65 +L + L A YG+SH+L GV+ ++ +GE +S+LGRNG+GRST +KA+MG V T GE+ Sbjct: 6 ILDVRELHAHYGKSHILQGVTFDLKKGEAISLLGRNGSGRSTTMKAIMGLVPPTSGEVLL 65 Query: 66 EDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPVPDDGWREEEVLTLF 125 ++LAG ++ I + G+G+VPE R+ F LTV +NL +G + G W E++ F Sbjct: 66 NGKNLAGERSFKICRAGIGFVPEERETFLNLTVDENLQMGIQRGAEGATRWTVEQMFDYF 125 Query: 126 PSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAHYLELLR 185 P L+ R AG+LSGGEQQML + R L+GNP ++LIDEPTEGL+P++V V ++ + Sbjct: 126 PRLKERRNTRAGSLSGGEQQMLTMCRTLLGNPLVMLIDEPTEGLAPKIVAVVGEMIKDIN 185 Query: 186 QRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWLAL 238 ++ V+V+L+EQK +AL++S RV VMG G +VF GTP +L AD+ L +EWLA+ Sbjct: 186 RQGVSVVLVEQKLTIALKVSSRVCVMGHGRIVFEGTPDELTADEKLMEEWLAV 238 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 4/209 (1%) Query: 7 LLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST-GEIDF 65 LL++AGL AWYG+SHVLHGV + V GE+V++LGRNG G++T L+A+MG VR GEI F Sbjct: 4 LLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEISF 63 Query: 66 EDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPVPDDGWREEEVLTLF 125 L + + +A RG+G+VPE R +F LTV +NLLL V G +E+ LF Sbjct: 64 AGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLL---PPAVAKGGMTIDEIFELF 120 Query: 126 PSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAHYLELLR 185 P+L R A LSGGEQQMLA+ R L R++L+DEPTEGL+P +V ++ L+ L+ Sbjct: 121 PNLHERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLK 180 Query: 186 QRQVAVLLIEQKQALALELSQRVYVMGRG 214 +R + VLL+EQ A +++ R Y+M G Sbjct: 181 ERGMTVLLVEQNFRFASKVADRFYLMDHG 209 >AF0822 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Afu Archaeoglobus fulgidus Length = 238 Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 146/235 (62%), Gaps = 4/235 (1%) Query: 7 LLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRS-TGEIDF 65 L + L YG VL GV+LEV RGEIVSI+G NGAG+STL + + G ++ +G I F Sbjct: 5 LFEVKDLHVAYGSYEVLRGVNLEVDRGEIVSIIGSNGAGKSTLFRTISGLIKPRSGRIIF 64 Query: 66 EDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPVPDDGWRE--EEVLT 123 E +AG + I G+ + PE R +FP L+V +NLLLG + G++E E V Sbjct: 65 EGEDIAGKSPEEIVSIGITHCPEGRFLFPELSVYKNLLLGYYTKRKDKKGFKERLEYVFE 124 Query: 124 LFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAHYLEL 183 +FP L+ R AG +SGGEQQMLA+ RALM +P+LLL+DEP+ GLSP++ V L+ Sbjct: 125 IFPVLKERINQRAGTMSGGEQQMLAIARALMPSPKLLLLDEPSLGLSPKLSWSVFEVLKE 184 Query: 184 LRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWLAL 238 ++ + A+L+ EQ +L L++S R YVM GE+ G ++ A+ +++ +L + Sbjct: 185 IK-KDTAILVSEQNASLCLKVSDRTYVMELGEIRLSGKADEVLANPEVKRAYLGI 238 >PA1070 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 233 Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 99/231 (42%), Positives = 146/231 (63%), Gaps = 1/231 (0%) Query: 7 LLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRS-TGEIDF 65 +L + +YG+ LH VS+EV +GEIV+++G NGAG+STLL + G ++ +G I + Sbjct: 1 MLSFDKVSTYYGKIQALHDVSVEVKKGEIVTLIGANGAGKSTLLMTLCGSPQAASGSIRY 60 Query: 66 EDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPVPDDGWREEEVLTLF 125 E L GL + I ++ + VPE R VF LTV++NL +G D + ++VL LF Sbjct: 61 EGEELVGLPSSTIMRKSIAVVPEGRRVFSRLTVEENLAMGGFFTDKDDYQVQMDKVLELF 120 Query: 126 PSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAHYLELLR 185 P L+ RY+ AG +SGGEQQMLA+GRALM P+LLL+DEP+ GL+P ++ Q+ +E LR Sbjct: 121 PRLKERYEQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFEIIEQLR 180 Query: 186 QRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 236 + V V L+EQ AL+L+ R YV+ G +V H T A L + ++ +L Sbjct: 181 REGVTVFLVEQNANQALKLADRAYVLENGRIVMHDTGAALLTNPKVRDAYL 231