BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0134.p (221 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr3187_2 [E] COG0765 ABC-type amino acid transport system, perm... 173 2e-43 AF0232 [E] COG0765 ABC-type amino acid transport system, permeas... 172 4e-43 lin0840_2 [E] COG0765 ABC-type amino acid transport system, perm... 172 4e-43 TM0592 [E] COG0765 ABC-type amino acid transport system, permeas... 169 3e-42 mll3859 [E] COG0765 ABC-type amino acid transport system, permea... 165 9e-41 >alr3187_2 [E] COG0765 ABC-type amino acid transport system, permease component Nos Nostoc sp. PCC 7120 Length = 240 Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/209 (44%), Positives = 136/209 (65%), Gaps = 13/209 (6%) Query: 13 PSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLN---PQRRLLYGLCTFYLTLVRGTPLL 69 P+LL G +VT+++T S VLG + G L L RL+ P R F+ RGTPLL Sbjct: 20 PTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPARLFARAYVDFF----RGTPLL 75 Query: 70 VQLFLWFFGLPHVGVIL------PAYVCGILGLGIYSAAYISEIVRGSIQSIERGQMEAA 123 VQ+F+ +FG+P + L +V G++ L + +AAYI+EIVR IQSIE GQ EAA Sbjct: 76 VQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAA 135 Query: 124 RSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISIT 183 +SLGL + MR VI PQAF RM+PPLGNEFI+L+K+++LV+++ +L +G+ I++ Sbjct: 136 KSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADN 195 Query: 184 YRSLETYLVIALIYLVLTSVTTLALRRIE 212 YR+ E Y +A++YL LT + + L R+E Sbjct: 196 YRAFEIYAAVAIVYLCLTLLASQVLSRLE 224 >AF0232 [E] COG0765 ABC-type amino acid transport system, permease component Afu Archaeoglobus fulgidus Length = 224 Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 89/189 (47%), Positives = 132/189 (69%), Gaps = 1/189 (0%) Query: 13 PSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYLTLVRGTPLLVQL 72 P L G VT+++T S+ G ++G + GLGR++ + L + + T Y+ ++RGTPLLVQ+ Sbjct: 17 PDLAFGASVTLKLTLISIFFGLIIGTIAGLGRVS-KNPLPFAISTAYVEVIRGTPLLVQI 75 Query: 73 FLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQMEAARSLGLPYRM 132 + +FGLP +G+ L GI+ L I S AYI+EIVR I+SI GQMEAARSLG+ Y Sbjct: 76 LIVYFGLPAIGINLQPEPAGIIALSICSGAYIAEIVRAGIESIPIGQMEAARSLGMTYLQ 135 Query: 133 AMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISITYRSLETYLV 192 AMR VI PQAF ++P LGNEFIAL+K+S+L+S+++I +L G +I++ T+ + +L Sbjct: 136 AMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVISIVELTRVGRQIVNTTFNAWTPFLG 195 Query: 193 IALIYLVLT 201 +AL YL++T Sbjct: 196 VALFYLMMT 204 >lin0840_2 [E] COG0765 ABC-type amino acid transport system, permease component Lin Listeria innocua Length = 212 Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 144/210 (68%), Gaps = 2/210 (0%) Query: 10 DSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYLTLVRGTPLL 69 SWP+LL G +T+ + SL++ ++G+ G +++ ++L G+ T Y+ + RGTPL+ Sbjct: 4 SSWPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVS-NSKILRGIATVYVDIFRGTPLI 62 Query: 70 VQLFLWFFGLPH-VGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQMEAARSLGL 128 VQ F ++FG+P + +P ++ G++ L + + AY+ EIVRG IQS+++GQMEAARSLGL Sbjct: 63 VQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEAARSLGL 122 Query: 129 PYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISITYRSLE 188 P++ AM +V+LPQA MIP N+F+ +K+++++S + + +L G+ I++ T+ S Sbjct: 123 PHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTW 182 Query: 189 TYLVIALIYLVLTSVTTLALRRIEKVLRSE 218 T+L+I ++YL++ ++ T R+E+ LR++ Sbjct: 183 TWLIIGIMYLIVITILTKVSDRLERRLRND 212 >TM0592 [E] COG0765 ABC-type amino acid transport system, permease component Tma Thermotoga maritima Length = 216 Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 138/211 (65%), Gaps = 1/211 (0%) Query: 6 SGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYLTLVRG 65 S + D+ P LL G + T+++T+ ++++G +G+ G+GRL+ R + Y + Y+ +RG Sbjct: 6 SVIVDNLPLLLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYP-SSVYVEFLRG 64 Query: 66 TPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQMEAARS 125 TPL+VQLFL +FGLP +G+ + ++ LGI S AY++EIVR IQS+ +GQ EAARS Sbjct: 65 TPLMVQLFLVYFGLPELGLEFDRFTAAVIALGINSGAYVAEIVRAGIQSVPKGQYEAARS 124 Query: 126 LGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISITYR 185 LG+ + AM VILPQAF ++P LGNEFIAL K+S+L ++ +LM + I+S T+ Sbjct: 125 LGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVIGTVELMRSAQYIVSRTFM 184 Query: 186 SLETYLVIALIYLVLTSVTTLALRRIEKVLR 216 S Y +ALIY +T + ++ +E L+ Sbjct: 185 SFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215 >mll3859 [E] COG0765 ABC-type amino acid transport system, permease component Mlo Mesorhizobium loti Length = 226 Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 137/211 (64%), Gaps = 2/211 (0%) Query: 10 DSWPSLLHGTMV-TVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYLTLVRGTPL 68 +S PSLL ++ TV +T +S VLG +GL LGRL + L+ L FY+ + RGTPL Sbjct: 10 ESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVM-LVRFYVWIFRGTPL 68 Query: 69 LVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQMEAARSLGL 128 LVQLFL F+GLP VG++L A+ ++G + AY SEI+R +I S+ +GQ EAA S+G+ Sbjct: 69 LVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGM 128 Query: 129 PYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISITYRSLE 188 + AMRR ILPQA +PPL N FI+L+K+++L + +T+ ++ ++I++ TY L Sbjct: 129 TWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLI 188 Query: 189 TYLVIALIYLVLTSVTTLALRRIEKVLRSEG 219 Y+ A++YL ++SV + R+E+ L G Sbjct: 189 LYVEAAILYLAMSSVLSALQTRLEERLNRYG 219