BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0129.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5091 [E] COG3741 N-formylglutamate amidohydrolase Pae Pseudomo... 266 5e-71 AGl1827 [E] COG3741 N-formylglutamate amidohydrolase Atu Agrobac... 250 3e-66 CC0958 Non COG 247 1e-65 BMEII0366 [E] COG3741 N-formylglutamate amidohydrolase Bme Bruce... 237 2e-62 SMb21164 [E] COG3741 N-formylglutamate amidohydrolase Sme Sinorh... 236 5e-62 >PA5091 [E] COG3741 N-formylglutamate amidohydrolase Pae Pseudomonas aeruginosa Length = 266 Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 140/260 (53%), Positives = 171/260 (65%), Gaps = 2/260 (0%) Query: 4 DICQLHQGSSPLLISMPHVGTRLPEELLASFSAVGLQVDDTDWHIAELYEFALGLGASVI 63 ++ +G PLLISMPH GTRL + A + DTDWHI LY+FA LGAS + Sbjct: 3 EVLSFKRGRVPLLISMPHPGTRLTPAVDAGLVEEARALTDTDWHIPRLYDFAEELGASTL 62 Query: 64 RPFHSRYVIDLNRPADGQSLYPGQNTTGLCPLTTFDNLPLYREGCEPDAAEIARRLQVYW 123 +SRYV+DLNRP+D + LY TTGL P T FD PLYREG P A E R L W Sbjct: 63 AAHYSRYVVDLNRPSDDKPLY-STATTGLYPDTLFDGRPLYREGMAPSAEERMRYLAEVW 121 Query: 124 HPYHAALQAELARLKAVHGYALLWDAHSIRSVIPHLFEGELPVFNFGTASGAACAPGLGE 183 PYH + ELARLKA GYALLWDAHSIRS +PHLF+G LP FN GT +GA+C P L Sbjct: 122 TPYHRTIAEELARLKAEFGYALLWDAHSIRSHVPHLFDGRLPDFNLGTNAGASCDPALAA 181 Query: 184 DLLALAQQLAPQFPAVLNGRFKGGYITRHYGQPARQVHALQLELAQRSYMQEYAPYALQA 243 L A+ A + VLNGRFKGG+ITRHYGQP + VHA+QLELAQ +YM E AP+A +A Sbjct: 182 RLEAVCAA-AEGYSHVLNGRFKGGHITRHYGQPEQHVHAVQLELAQCTYMDEQAPFAYRA 240 Query: 244 ALADQLKPVLQALVTRFMAF 263 LA+ + V++ L+ +A+ Sbjct: 241 DLAEATRAVIRELLESLLAW 260 >AGl1827 [E] COG3741 N-formylglutamate amidohydrolase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 311 Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 125/257 (48%), Positives = 167/257 (64%), Gaps = 3/257 (1%) Query: 8 LHQGSSPLLISMPHVGTRLPEELLASFSAVGLQVDDTDWHIAELYEFALGLGASVIRPFH 67 LHQG+SP++++ PH GT +P + G DTDWHI LY L +V FH Sbjct: 52 LHQGTSPVILAFPHTGTEVPPAIWDRLDDNGRIFADTDWHIHTLYAGLLENATTVRATFH 111 Query: 68 SRYVIDLNRPADGQSLYPGQNTTGLCPLTTFDNLPLYREGCEPDAAEIARRLQVYWHPYH 127 RYVID NR G SLYPGQNTTGL P T FD P+++ G EP+ A+IA RL+ + PYH Sbjct: 112 -RYVIDANRDPAGVSLYPGQNTTGLVPETDFDGKPIWKTGAEPNEADIAHRLETFHAPYH 170 Query: 128 AALQAELARLKAVHGYALLWDAHSIRSVIPHLFEGELPVFNFGTASGAACAPGLGEDLLA 187 AAL AE+ R+K++HG A+L+D HSIRS IP LFEG+LP FN GT G C P + E + Sbjct: 171 AALAAEIERVKSIHGIAILYDCHSIRSHIPFLFEGKLPDFNIGTDMGKTCDPAI-EKIAV 229 Query: 188 LAQQLAPQFPAVLNGRFKGGYITRHYGQPARQVHALQLELAQRSYMQ-EYAPYALQAALA 246 A + ++LNGRFKGG+ TRHYG+P VHA+Q+ELAQ +++Q E+ P+A A Sbjct: 230 EVTAAAQGYDSILNGRFKGGWTTRHYGKPQTGVHAIQMELAQSTHLQNEHPPFAYDTGKA 289 Query: 247 DQLKPVLQALVTRFMAF 263 ++L+ L+ ++TR F Sbjct: 290 ERLRTHLKTILTRMEKF 306 >CC0958 Non COG Length = 271 Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/269 (49%), Positives = 172/269 (63%), Gaps = 11/269 (4%) Query: 3 HDICQLHQGSSPLLISMPHVGTRLPEELLASFSAVGLQVDDTDWHIAELYEFALGLGASV 62 D Q+ +GS+PL+IS+PH GT +P ++ + ++ L D DW + +LY FA LGA++ Sbjct: 2 RDWLQVVRGSAPLIISLPHTGTDIPPDIESQLASPWLARKDADWWVEQLYAFAENLGATL 61 Query: 63 IRPFHSRYVIDLNRPADGQSLYPGQNTTGLCPLTTFDNLPLYREGCEPDAAEIARRLQVY 122 +R SR VID+NR G SLYPGQ TT LCP TTFD PLYR+G PDAAEI R Y Sbjct: 62 VRTAISRTVIDVNRDPSGASLYPGQATTELCPTTTFDGEPLYRDGG-PDAAEIDHRRTTY 120 Query: 123 WHPYHAALQAELARLKAVHGYALLWDAHSIRSVIPHLFEGELPVFNFGTASGAACAPGLG 182 + PYHAAL++E+ RL+AVH +L++AHSIRS +P LFEGELP FN GT SG +CA L Sbjct: 121 FEPYHAALRSEIERLRAVHPTVVLYEAHSIRSRVPRLFEGELPQFNLGTNSGQSCADALT 180 Query: 183 EDLLALAQQLAPQFPAVLNGRFKGGYITRHYGQPARQVHALQLELAQRSYMQEYAP---- 238 + A A V NGRFKGG+ TRHYGQPA VHA+Q+ELA R YM + A Sbjct: 181 VAVEAACD--ASGLSRVTNGRFKGGWTTRHYGQPATGVHAIQMELACRGYMDDPAEPPTP 238 Query: 239 ----YALQAALADQLKPVLQALVTRFMAF 263 AA A+ L+ VL+ ++ + F Sbjct: 239 DTWPTPFHAARAEPLRAVLEEVLGACLDF 267 >BMEII0366 [E] COG3741 N-formylglutamate amidohydrolase Bme Brucella melitensis Length = 314 Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/261 (46%), Positives = 170/261 (65%), Gaps = 5/261 (1%) Query: 3 HDI--CQLHQGSSPLLISMPHVGTRLPEELLASFSAVGLQVDDTDWHIAELYEFALGLGA 60 HD+ + QG+SP+++ +PH GT +P+++ + + G + DTDWHI +LY+ L GA Sbjct: 47 HDMRAVETRQGNSPVILGLPHTGTDVPDDIWSRLNDNGKILADTDWHIHKLYD-GLIDGA 105 Query: 61 SVIRPFHSRYVIDLNRPADGQSLYPGQNTTGLCPLTTFDNLPLYREGCEPDAAEIARRLQ 120 + +R RY ID NR G SLYPGQNTT L P T FD L ++++G P A+IA R+ Sbjct: 106 TFVRATFHRYCIDANRDPAGVSLYPGQNTTTLIPETDFDGLSIWKDGEAPTEADIADRIA 165 Query: 121 VYWHPYHAALQAELARLKAVHGYALLWDAHSIRSVIPHLFEGELPVFNFGTASGAACAPG 180 + PYH AL AE+ R+KA+HG A+L+D HSIRS IP LFEG+LP FN GT G C PG Sbjct: 166 RFHRPYHDALAAEIERVKAIHGVAILYDCHSIRSHIPFLFEGKLPDFNIGTDMGKTCDPG 225 Query: 181 LGEDLLALAQQLAPQFPAVLNGRFKGGYITRHYGQPARQVHALQLELAQRSYM-QEYAPY 239 + + + + A + ++LNGRFKGG+ TRHYG+P VHA+Q+ELAQ +++ E P+ Sbjct: 226 IEAAAVEVTAK-AKGYTSILNGRFKGGWTTRHYGRPQTGVHAIQMELAQSTHLATEAVPF 284 Query: 240 ALQAALADQLKPVLQALVTRF 260 A A AD L+ L+ L+ R Sbjct: 285 AYDEAKADTLRVHLKTLLQRL 305 >SMb21164 [E] COG3741 N-formylglutamate amidohydrolase Sme Sinorhizobium meliloti Length = 271 Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 125/257 (48%), Positives = 166/257 (64%), Gaps = 3/257 (1%) Query: 5 ICQLHQGSSPLLISMPHVGTRLPEELLASFSAVGLQVDDTDWHIAELYEFALGLGASVIR 64 + ++ QGSSP+++ PH GT +P + + G + DTDWHI +LY+ L +V Sbjct: 3 VFEVRQGSSPVILGFPHTGTDVPASIRERLNDNGRILADTDWHIHDLYQGLLPDATAVRA 62 Query: 65 PFHSRYVIDLNRPADGQSLYPGQNTTGLCPLTTFDNLPLYREGCEPDAAEIARRLQVYWH 124 FH RYVID NR G SLYPGQNTTGL P T FD LP+++EG P +I RL+ + Sbjct: 63 TFH-RYVIDANRDPAGVSLYPGQNTTGLVPETDFDGLPIWKEGEGPTEVDITERLRDFHA 121 Query: 125 PYHAALQAELARLKAVHGYALLWDAHSIRSVIPHLFEGELPVFNFGTASGAACAPGLGED 184 PYHAAL AE+AR+KA+HG +L+D HSIRS IP LFEG LP FN GT G CA + Sbjct: 122 PYHAALSAEIARVKAIHGVVVLYDCHSIRSHIPFLFEGRLPDFNIGTDMGKTCATEIER- 180 Query: 185 LLALAQQLAPQFPAVLNGRFKGGYITRHYGQPARQVHALQLELAQRSYM-QEYAPYALQA 243 A A + +LNGRFKGG+ TRHYG+P + VHA+Q+ELAQ +++ E P+AL Sbjct: 181 AAAEIAAGAECYSHILNGRFKGGWTTRHYGRPEQGVHAIQMELAQSTHLATEAPPFALDR 240 Query: 244 ALADQLKPVLQALVTRF 260 A AD+L+ L+A++ R Sbjct: 241 AKADRLRRPLKAILERI 257