BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0108.p         (108 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1543 [K] COG0640 Predicted transcriptional regulators Rso Ral...   106   1e-23
AGl2725 [K] COG0640 Predicted transcriptional regulators Atu Agr...    99   3e-21
mlr2159 [K] COG0640 Predicted transcriptional regulators Mlo Mes...    93   1e-19
SMa1056 [K] COG0640 Predicted transcriptional regulators Sme Sin...    93   2e-19
BMEII0810 [K] COG0640 Predicted transcriptional regulators Bme B...    92   3e-19

>RSc1543 [K] COG0640 Predicted transcriptional regulators Rso Ralstonia
           solanacearum
          Length = 121

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 3/108 (2%)

Query: 1   VFTMTSPSSLQ---ADQMRRAAGQAVAALKVLANEDRLLLMCQLSQAEMCVSELEESLDI 57
           V T   P+ L     D +R AA QA A LK +A+EDRLLL+CQL+Q E  V ELE  + +
Sbjct: 7   VATTAPPAPLPEHAIDMLRDAAAQACAVLKAMAHEDRLLLLCQLTQGERNVGELEMLVGL 66

Query: 58  RQPTLSQQLGVLRNEGVVSTRREGKRVYYRVADPKLLEMLGLMYQLYC 105
            QP+LSQ LGVLR+EG+V+TRR+GK +YYR+A  ++++++  +  LYC
Sbjct: 67  HQPSLSQHLGVLRDEGLVATRRDGKYIYYRLASFEVIQIMQTLSSLYC 114


>AGl2725 [K] COG0640 Predicted transcriptional regulators Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 117

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 63/94 (67%)

Query: 15  MRRAAGQAVAALKVLANEDRLLLMCQLSQAEMCVSELEESLDIRQPTLSQQLGVLRNEGV 74
           M + A +    LK LA+  RL+L C L+Q E  V ELE  LDIRQPTLSQQLGVLR  G+
Sbjct: 21  MEKRATEVAILLKTLAHPARLMLACTLAQGEFSVGELEAKLDIRQPTLSQQLGVLREAGI 80

Query: 75  VSTRREGKRVYYRVADPKLLEMLGLMYQLYCPKE 108
           V TRRE K+++YR+A+ K   ++  +Y ++C  E
Sbjct: 81  VDTRREAKQIFYRLAEDKAARLIEALYAIFCAPE 114


>mlr2159 [K] COG0640 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 112

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 63/91 (69%)

Query: 15  MRRAAGQAVAALKVLANEDRLLLMCQLSQAEMCVSELEESLDIRQPTLSQQLGVLRNEGV 74
           M   AG+  A LK LA+  RL+L+C L + E  VS+LEE+LDI QP LSQQL VLR+  +
Sbjct: 17  MESRAGEVAALLKTLAHPMRLMLVCTLVEGEYSVSQLEETLDIHQPNLSQQLTVLRDANI 76

Query: 75  VSTRREGKRVYYRVADPKLLEMLGLMYQLYC 105
           V TRR+GK+++YR+   K  +++  +Y ++C
Sbjct: 77  VETRRDGKQIFYRLTAEKAAQLVAALYTIFC 107


>SMa1056 [K] COG0640 Predicted transcriptional regulators Sme Sinorhizobium
           meliloti
          Length = 115

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 63/101 (62%)

Query: 8   SSLQADQMRRAAGQAVAALKVLANEDRLLLMCQLSQAEMCVSELEESLDIRQPTLSQQLG 67
           + L   +M   AG+    LK L++  RL+++C L Q E  V ELEE +D+ QP LSQ L 
Sbjct: 13  AGLSPAEMASRAGEVAKLLKTLSHPARLMIVCTLVQGEYSVGELEEKVDVHQPHLSQHLT 72

Query: 68  VLRNEGVVSTRREGKRVYYRVADPKLLEMLGLMYQLYCPKE 108
           VLR  G+V TRR+GK+++YR+   K   ++  +Y ++C KE
Sbjct: 73  VLRGSGIVQTRRDGKQIFYRLTGEKAARLIAALYDIFCVKE 113


>BMEII0810 [K] COG0640 Predicted transcriptional regulators Bme Brucella
           melitensis
          Length = 117

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 63/95 (66%)

Query: 13  DQMRRAAGQAVAALKVLANEDRLLLMCQLSQAEMCVSELEESLDIRQPTLSQQLGVLRNE 72
           +QM   A +    LK L++  RL+L C L++ E  V ELEE L IRQPTLSQQLGVLR  
Sbjct: 19  EQMEARANEVAELLKTLSHPARLMLACTLAEGEYSVGELEEMLGIRQPTLSQQLGVLREA 78

Query: 73  GVVSTRREGKRVYYRVADPKLLEMLGLMYQLYCPK 107
            +V TRRE K++YYR+ + K  +++  +Y ++C +
Sbjct: 79  DIVETRREAKQIYYRLVETKAAKLIDALYGIFCKE 113