BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0101.p (264 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC1641 [T] COG2200 FOG Vch Vibrio cholerae 272 5e-73 CC3148 [T] COG2200 FOG Ccr Caulobacter vibrioides 253 4e-67 VC1592 [T] COG2200 FOG Vch Vibrio cholerae 135 1e-31 CAC2702_1 [T] COG2200 FOG Cac Clostridium acetobutylicum 132 1e-30 ycgF_2 [T] COG2200 FOG Eco Escherichia coli K12 123 4e-28 >VC1641 [T] COG2200 FOG Vch Vibrio cholerae Length = 257 Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 125/237 (52%), Positives = 173/237 (72%) Query: 19 RSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSNRYR 78 ++C ++ LD +F A+QPIV T+ ++ YEALVRG E AY+V+ +VN+ NRY Sbjct: 11 KTCSCGVNENSLDFDFTMAFQPIVNCRTKEIFGYEALVRGLNNESAYSVISRVNEDNRYL 70 Query: 79 FDQACRTKAVEGAARLGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIFEVT 138 FDQ CR KA+ AA+LG+T LSINFLPNA+Y PE CI++T +AA++Y FPIE I+FE T Sbjct: 71 FDQMCRVKAIALAAKLGLTSKLSINFLPNAIYVPERCIRTTLEAAKRYQFPIENIMFEFT 130 Query: 139 EGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRNIDT 198 E ERV+D H+ I Y GF+TAIDDFG+GY+GLNLLA++Q +++K+DM L+RNI Sbjct: 131 EAERVEDVNHIKRIVEYYKSLGFQTAIDDFGSGYSGLNLLADFQTNIVKVDMGLIRNIHA 190 Query: 199 DKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 D+ RQ+I+ + +L+I+ LAEGVE+ AE L A G++LMQGY+FAKP F++L Sbjct: 191 DQVRQSIMKNCLKLFSDLNIQPLAEGVESHAEFAWLKAAGVELMQGYYFAKPGFESL 247 >CC3148 [T] COG2200 FOG Ccr Caulobacter vibrioides Length = 304 Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 123/241 (51%), Positives = 167/241 (69%), Gaps = 4/241 (1%) Query: 19 RSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSNRYR 78 ++C GC D + F A+QPIV+LS+ V+A+EAL RG +G+ A TVL ++D NRY Sbjct: 38 KACSGCRDGQDFETPFSMAFQPIVKLSSGEVFAHEALARGAEGQGAGTVLSTISDQNRYV 97 Query: 79 FDQACRTKAVEGAARLGMTQF---LSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIF 135 FDQ CR KA+E A L + Q LSINF+PNAVY P CI+ T A + FP+ R+IF Sbjct: 98 FDQQCRVKAIELATTLDLPQGGANLSINFMPNAVYEPRACIRLTLATAMRTGFPLNRLIF 157 Query: 136 EVTEGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRN 195 E TE E++D + H++NI R Y GF+TAIDDFGAGYAGLNL A+YQPD++K+DMDL+R+ Sbjct: 158 EFTENEQLDIQ-HVLNILRTYRAMGFKTAIDDFGAGYAGLNLFAKYQPDIVKLDMDLIRD 216 Query: 196 IDTDKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 ID+D+ ++ IV+ + + EL+I + EGVET E L LG+D +QGY AKP F+ L Sbjct: 217 IDSDRGKRVIVSNLLRMLTELEIFAVCEGVETMDELSALRDLGVDYVQGYVIAKPVFEGL 276 Query: 256 S 256 + Sbjct: 277 A 277 >VC1592 [T] COG2200 FOG Vch Vibrio cholerae Length = 284 Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 4/219 (1%) Query: 38 YQPIVRLSTRAVYAYEALVRGPQGEPAYT---VLEQVNDSNRY-RFDQACRTKAVEGAAR 93 +QPIV L++ YE+L RGPQ P +T + E R ++ C KA + Sbjct: 24 FQPIVHLASERAIGYESLSRGPQQSPLHTAGSLFEAAEQCQRLPELEKICVHKAAAAWSS 83 Query: 94 LGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIFEVTEGERVDDRPHLVNIF 153 G+ L IN P+ + + + +++ +++FE++E L N Sbjct: 84 FGIDSQLFINLSPDMLLHSQQHQWELPQLMQRHRLSANQVVFEISERTPALQLDELKNSV 143 Query: 154 REYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRNIDTDKPRQAIVAGIAAIC 213 + GF AIDD G+GY+GL L +E QPD +KID + NID++ + V + + Sbjct: 144 QHLQAQGFSIAIDDMGSGYSGLKLWSELQPDFVKIDRYFIHNIDSNPIKLKFVRSLVQLA 203 Query: 214 KELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKF 252 ++LD +++AEGVETR+E +A LGI+L+QGY F +P+ Sbjct: 204 EQLDCQLIAEGVETRSELLAIADLGIELVQGYLFGRPQL 242 >CAC2702_1 [T] COG2200 FOG Cac Clostridium acetobutylicum Length = 269 Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 38 YQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSNRYR----FDQACRTKAVEGAAR 93 +QPI+ LS + YEAL RGP P Y + + + +Y + ACR A++ + Sbjct: 20 FQPIISLSDCRILGYEALSRGPIDSPLYLPSDLFSAAKKYNKTWELELACRVTAIKNSKT 79 Query: 94 LGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIFEVTEGERVDDRPHLVNIF 153 L +FL IN P + + + KY+ + IIFE+TE + D I Sbjct: 80 LSPDKFLFINVDPEIIKSQNFQTSFSKEYLAKYNISPKNIIFEITERTAISDYKAFSKIL 139 Query: 154 REYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRNIDTDKPRQAIVAGIAAIC 213 + Y+ G++ A+DD G+GY+GL ++E +P IK+D++L+ NID + ++ +V Sbjct: 140 KNYTSQGYKIALDDTGSGYSGLQTISETKPHYIKLDIELIHNIDRNNFKKLLVKSFVDFS 199 Query: 214 KELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKP 250 K ++++AEG+ET E L LG+ QG++ +KP Sbjct: 200 KAAKLKLIAEGIETEGELKVLIDLGVYAGQGFFISKP 236 >ycgF_2 [T] COG2200 FOG Eco Escherichia coli K12 Length = 243 Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 1/222 (0%) Query: 35 EYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSNRYRFDQACRTKAVEGAARL 94 +A+ PIV +R + A+EA+V+ + P+ + Q D Y D + A A L Sbjct: 13 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 72 Query: 95 GMT-QFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIFEVTEGERVDDRPHLVNIF 153 + + +SIN LP + + + E+II E TE E + Sbjct: 73 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 132 Query: 154 REYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRNIDTDKPRQAIVAGIAAIC 213 + G AID FGAG+AGL LL+ +QPD IKI +L+ N+ PRQAI+ I C Sbjct: 133 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 192 Query: 214 KELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 L+I++ A GV T E L + GI++ QG FAK K + Sbjct: 193 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 234