BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0092.p         (66 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpA506 [L] COG4644 Transposase and inactivated derivatives, Tnp...    67   1e-11

>AGpA506 [L] COG4644 Transposase and inactivated derivatives, TnpA family
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 527

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 1   VLWNTVYLERVIEALRAQGKDIDDALLSFLSPLGWEHINLTGDYLWRQSKRLEIGQYRPL 60
           V WNTVYL+R I  L+ +G++I D LL  +SPL WEHINLTG Y W    ++  G +R L
Sbjct: 459 VHWNTVYLDRAITQLKREGRNIPDTLLKHISPLSWEHINLTGIYTWDAEHQMPDG-FRSL 517

Query: 61  R 61
           R
Sbjct: 518 R 518