BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0051.p (401 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0279 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solana... 624 e-178 BMEI1923 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melite... 590 e-168 PA2015 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 579 e-165 SMb21121 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium m... 573 e-163 AGl2707 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tu... 546 e-155 >RSc0279 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solanacearum Length = 393 Score = 624 bits (1608), Expect = e-178, Method: Compositional matrix adjust. Identities = 306/401 (76%), Positives = 343/401 (85%), Gaps = 8/401 (1%) Query: 1 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 60 MI LPGL FD G DI LR AV +AQ E+APRA IDRSDQFPMD WK++GDLGVLGIT Sbjct: 1 MIELPGLRFDLGVDIEMLRSAVRDWAQAELAPRAEAIDRSDQFPMDAWKQMGDLGVLGIT 60 Query: 61 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 120 V EEYGG+G+GYLAH+IAMEEISRASASVGLSYGAHSNLCVNQI RNG QK KYLPKL Sbjct: 61 VAEEYGGSGMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTPAQKAKYLPKL 120 Query: 121 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 180 +SG++IGALAMSEPNAGSDVVSMKLRA+ +GDRYVLNG+KMWITNGPD DVLVVY KT+ Sbjct: 121 VSGEWIGALAMSEPNAGSDVVSMKLRAECRGDRYVLNGTKMWITNGPDCDVLVVYGKTEP 180 Query: 181 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 240 + GARGMTAF+VEKG KGFSVAQKLDKLGMRGSHTGELVF + EVP ENVLG G V Sbjct: 181 ELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPAENVLGEENGGTRV 240 Query: 241 LMSGLDFERSVLSGGPLGIMQXCVCVCVCVCVCVVPYVHDRKQFGQAIGEFQLMQGKLAD 300 LMSGLD+ER+VLSGGP+GIMQ C+ V V PY+HDRKQFGQ+IGEFQL+QGK+AD Sbjct: 241 LMSGLDYERAVLSGGPIGIMQACMDV-------VTPYIHDRKQFGQSIGEFQLIQGKIAD 293 Query: 301 MYSTMMACKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGN 360 MY+T+ AC+AY+Y VG+ D A + VR +RKD AG ILY+AEKATWMAGEAIQ LGGN Sbjct: 294 MYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGN 352 Query: 361 GYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL 401 GYINE+P GRLWRDAKLYEIGAGTSEIRRMLIGREL+A+T+ Sbjct: 353 GYINEFPTGRLWRDAKLYEIGAGTSEIRRMLIGRELYAETM 393 >BMEI1923 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melitensis Length = 382 Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust. Identities = 292/394 (74%), Positives = 332/394 (84%), Gaps = 13/394 (3%) Query: 7 LNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGITVGEEYG 66 +NF GE+I ALR+ V FA++ IAP AAE DR++QFPM LW++ G+LGVLGIT E+YG Sbjct: 1 MNFGLGEEIEALRDTVRRFAESRIAPLAAETDRNNQFPMHLWREFGELGVLGITAPEDYG 60 Query: 67 GAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKLISGDFI 126 GAG+GYLAH IAMEEISRASAS+GLSYGAHSNLCVNQI RNG+ EQ+ KYLPKLISG+ + Sbjct: 61 GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEHV 120 Query: 127 GALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDLDAGARG 186 GALAMSEP AGSDVVSMKL A+K+GDRYVLNG+KMWITNGPDADVLVVYAKTDL AG RG Sbjct: 121 GALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLVVYAKTDLSAGPRG 180 Query: 187 MTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNVLMSGLD 246 ++AF++EKG+KGFS AQKLDKLGMRGS+T ELVF+DCEVP EN+LG G+GVNVLMSGLD Sbjct: 181 ISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGTEGKGVNVLMSGLD 240 Query: 247 FERSVLSGGPLGIMQXCVCVCVCVCVCVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMM 306 +ER VL+GGPLGIM C+ V VVPYVH+RKQF Q IGEFQLMQ KLADMY T Sbjct: 241 YERVVLAGGPLGIMAACLDV-------VVPYVHERKQFDQPIGEFQLMQCKLADMYVTFN 293 Query: 307 ACKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEY 366 A +AYVYA+ ACDR ++ RKDAAG ILYSAE AT MA +AIQSLGGNGYIN+Y Sbjct: 294 ASRAYVYAMAAACDRGETT------RKDAAGCILYSAENATQMALQAIQSLGGNGYINDY 347 Query: 367 PVGRLWRDAKLYEIGAGTSEIRRMLIGRELFADT 400 P GRL RDAKLYEIGAGTSEIRRMLIGRELF +T Sbjct: 348 PTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQET 381 >PA2015 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 387 Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust. Identities = 283/396 (71%), Positives = 325/396 (82%), Gaps = 13/396 (3%) Query: 5 PGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGITVGEE 64 P LNF GE I LR+ V F E+ PRAA+ID+ +QFPMD+W+K G++G+LGITV EE Sbjct: 4 PSLNFALGETIDMLRDQVRGFVAAELQPRAAQIDQDNQFPMDMWRKFGEMGLLGITVDEE 63 Query: 65 YGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKLISGD 124 YGG+ LGYLAH + MEEISRASASV LSYGAHSNLCVNQIKRNGN EQK +YLP L+SG+ Sbjct: 64 YGGSALGYLAHAVVMEEISRASASVALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGE 123 Query: 125 FIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDLDAGA 184 IGALAMSEPNAGSDVVSMKLRAD+ GDR+VLNGSKMWITNGPDA V+YAKTD D GA Sbjct: 124 HIGALAMSEPNAGSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGA 183 Query: 185 RGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNVLMSG 244 G+TAF+VE+ +KGFS KLDKLGMRGS+T EL+FQD EVPEENVLG V GV VLMSG Sbjct: 184 HGITAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSG 243 Query: 245 LDFERSVLSGGPLGIMQXCVCVCVCVCVCVVPYVHDRKQFGQAIGEFQLMQGKLADMYST 304 LD+ER VLSGGP+GIMQ C+ V VVPY+HDR+QFGQ+IGEFQL+QGK+ADMY+ Sbjct: 244 LDYERVVLSGGPVGIMQACMDV-------VVPYIHDRRQFGQSIGEFQLVQGKVADMYTA 296 Query: 305 MMACKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYIN 364 + A +AY+YAV ACDR ++ RKDAAG ILYSAE+AT MA +AIQ LGGNGYIN Sbjct: 297 LNASRAYLYAVAAACDRGETT------RKDAAGVILYSAERATQMALDAIQILGGNGYIN 350 Query: 365 EYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFADT 400 E+P GRL RDAKLYEIGAGTSEIRRMLIGRELF +T Sbjct: 351 EFPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNET 386 >SMb21121 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium meliloti Length = 387 Score = 573 bits (1476), Expect = e-163, Method: Compositional matrix adjust. Identities = 297/395 (75%), Positives = 328/395 (83%), Gaps = 13/395 (3%) Query: 6 GLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGITVGEEY 65 GLNF GE+I ALR +V FA IAP A + DRS+ FPM LW+++G+LG+LGIT E + Sbjct: 5 GLNFALGEEIDALRASVRRFASERIAPLADDADRSNAFPMSLWREMGELGLLGITADEAH 64 Query: 66 GGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKLISGDF 125 GGAGLGYLAH +AMEEISRASASVGLSYGAHSNLCVNQI RNG QK +YLPKLISG+ Sbjct: 65 GGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGKPAQKSRYLPKLISGEH 124 Query: 126 IGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDLDAGAR 185 +GALAMSEP AGSDVVSMKL+ADK+GDRYVLNGSKMWITNGPDADVLVVYAKTD AG R Sbjct: 125 VGALAMSEPGAGSDVVSMKLKADKRGDRYVLNGSKMWITNGPDADVLVVYAKTDPAAGPR 184 Query: 186 GMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNVLMSGL 245 G+TAFLVEK + GFS QKLDKLGMRGS+T EL+F DCEVPEENVLGGVG GV VLMSGL Sbjct: 185 GITAFLVEKAFPGFSAGQKLDKLGMRGSNTSELIFTDCEVPEENVLGGVGEGVKVLMSGL 244 Query: 246 DFERSVLSGGPLGIMQXCVCVCVCVCVCVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTM 305 D+ER VLS GPLGIM C+ V VVPY+H+RKQFGQ IGEFQLMQGKLADMY TM Sbjct: 245 DYERVVLSAGPLGIMAACLDV-------VVPYLHERKQFGQPIGEFQLMQGKLADMYVTM 297 Query: 306 MACKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINE 365 A +AYVYAV ACDR ++A RKDAAG ILY+AEKAT MA EAIQ+LGGNGY N+ Sbjct: 298 NAARAYVYAVAAACDRGETA------RKDAAGCILYAAEKATAMALEAIQALGGNGYTND 351 Query: 366 YPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFADT 400 YP GRL RDAKLYEIGAGTSEIRRMLIGRELFA+T Sbjct: 352 YPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFAET 386 >AGl2707 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 421 Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust. Identities = 268/390 (68%), Positives = 324/390 (83%), Gaps = 13/390 (3%) Query: 7 LNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGITVGEEYG 66 + D G +IAALR++ +AFA +IAP A EIDR+D+FP LW ++G+LG+ GITV EE+G Sbjct: 40 FDADLGPEIAALRDSASAFADDKIAPLATEIDRNDRFPRQLWPQMGELGLHGITVSEEFG 99 Query: 67 GAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKLISGDFI 126 GA +GYLAH +AMEEISRASAS+GLSYGAHSNLC+NQI R G +EQK +YLPKL+SGD + Sbjct: 100 GADMGYLAHCVAMEEISRASASIGLSYGAHSNLCINQIHRWGTDEQKHRYLPKLVSGDHV 159 Query: 127 GALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDLDAGARG 186 G+LAMSE AGSDVVSM+L+A++KGDRYVLNG+KMWITNG +AD LVVYAKTD+ AGARG Sbjct: 160 GSLAMSETEAGSDVVSMRLKAERKGDRYVLNGAKMWITNGHEADTLVVYAKTDMSAGARG 219 Query: 187 MTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNVLMSGLD 246 +TAFL+EKG+KGF AQKLDKLGMRGS T ELVF+DCEVPEEN+LG + GV VLMSGLD Sbjct: 220 ITAFLIEKGFKGFRPAQKLDKLGMRGSPTSELVFEDCEVPEENILGRLNDGVTVLMSGLD 279 Query: 247 FERSVLSGGPLGIMQXCVCVCVCVCVCVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMM 306 +ER+VL+ GP+GIMQ + + V+PYV +RKQFG+AIGEFQL+QGKLAD+YS M Sbjct: 280 YERAVLAAGPVGIMQAAIDL-------VLPYVRERKQFGKAIGEFQLVQGKLADIYSAMN 332 Query: 307 ACKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEY 366 A +AYVYAV +ACD R R+DAAGAIL++AE+AT +A +AIQ LGG+GY+NE Sbjct: 333 ASRAYVYAVARACDNG------RITRQDAAGAILFAAERATQVALDAIQLLGGSGYVNES 386 Query: 367 PVGRLWRDAKLYEIGAGTSEIRRMLIGREL 396 P GRL RDAKLYEIGAGTSEIRRMLIGREL Sbjct: 387 PAGRLLRDAKLYEIGAGTSEIRRMLIGREL 416