BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0050.p         (200 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rs...   219   4e-57
PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae...   115   6e-26
CC0643 Non COG                                                         93   3e-19
AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase At...    62   1e-09

>RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rso Ralstonia
           solanacearum
          Length = 201

 Score =  219 bits (557), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 102/201 (50%), Positives = 138/201 (68%), Gaps = 1/201 (0%)

Query: 1   MSTPIDFYFDFSSPYGYFAAVEIDKLAAKYSRSVNWHPILLGPIFKALGTNSLANIPVKG 60
           M+  IDFYFDFSSPYGYFA+  ++ LA +Y+R+  WHPILLG +FK  G   LA  P+KG
Sbjct: 1   MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQPLKG 60

Query: 61  DYSRHDMERTARFHNIFYKAPSQFPIGTQVAARATLWVQQTQPA-KAVDLIKTLYSAYFT 119
           DY+  D ERTARFH I Y+ P+ FP+ TQ AARA LWV       +A+   + +Y A F 
Sbjct: 61  DYAWRDFERTARFHGIDYRKPTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRALFV 120

Query: 120 EDIDISVPENVLRIAADNGIDRAALETALGTPELKEQLRAATEAAGKAGVFGSPFMIVDG 179
           +D++I  P  V++IA   GID  AL    G+ ++K+QL+A  + A   GVFGSP++I+DG
Sbjct: 121 DDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKAEIDLAMSRGVFGSPYVIIDG 180

Query: 180 EQFWGFDRFTQLEAFLKNGKI 200
           E FWGFDRF Q+EA L++G++
Sbjct: 181 EPFWGFDRFDQIEALLRDGRV 201


>PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae
           Pseudomonas aeruginosa
          Length = 195

 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 8/191 (4%)

Query: 1   MSTPIDFYFDFSSPYGYFAAVEIDKLAAKYSRSVNWHPILLGPIFKALGTNSLANIPVKG 60
           MS  I+F+FDF SP  Y A  ++ ++AA +  S+ W P+LLG +FKA G +S   +P KG
Sbjct: 1   MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVFKATGNHSPIEVPAKG 60

Query: 61  DYSRHDMERTARFHNIFYKAPSQFPIGTQV---AARATLWVQQTQPAKAVDLIKTLYSAY 117
            Y+ HD+ R A+ + +       FPI T      A+  L  +  QP      +K ++ A 
Sbjct: 61  RYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGFQP-----YLKAVFEAL 115

Query: 118 FTEDIDISVPENVLRIAADNGIDRAALETALGTPELKEQLRAATEAAGKAGVFGSPFMIV 177
           +    ++  PE V ++ A+ G D       +G  ++KE L+A TE A + GVFG+P   V
Sbjct: 116 WVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGVFGAPSFFV 175

Query: 178 DGEQFWGFDRF 188
             + F+G DR 
Sbjct: 176 GDQLFFGQDRL 186


>CC0643 Non COG
          Length = 206

 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 5   IDFYFDFSSPYGYFAAVEIDKLAAKYSRSVNWHPILLGPIFKALGTNS----LANIPVKG 60
           IDF FDF SP  Y +   + ++AA+   +V   P LLG IFKA G  +       +  K 
Sbjct: 10  IDFIFDFGSPNAYLSWKLLPEIAARQGAAVRLIPCLLGGIFKATGNQAPMIAFGGVKGKM 69

Query: 61  DYSRHDMERTARFHNIF-YKAPSQFPIGTQVAARATLWVQQTQPAKAVDLIKTLYSAYFT 119
           DY   +  R    H +  ++    FP+ T +  R  +  Q+   A+A   ++ +    + 
Sbjct: 70  DYEMLETRRFIAAHGLTAFRFNPHFPVNTLLLMRGMIAAQRIGVAEAY--LEAMLKGMWE 127

Query: 120 EDIDISVPENVLRIAADNGIDRAALETALGTPELKEQLRAATEAAGKAGVFGSPFMIVDG 179
           + + +  PE  +  A   G+D AAL  A G  E+K +L A TEAA   G FG P   V  
Sbjct: 128 DGLKLDDPEVFVATANAAGLDGAALLAATGDAEVKAELVANTEAAVARGTFGIPTFFVGE 187

Query: 180 EQFWGFDRFTQLEAFLKNG 198
           E F+G +R  Q+EA L  G
Sbjct: 188 EIFFGKERLGQVEAELAKG 206


>AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 219

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 6/191 (3%)

Query: 7   FYFDFSSPYGYFAAVEIDKLAAKYSRSVNWHPILLGPIFKALGTNSLANIPV-KGDYSRH 65
           +Y   SSP+ Y    +   L  K+   V   P     I    G   L + P  + DY   
Sbjct: 30  YYHALSSPWAYLGGPQFKALVEKHDLDVVVRPTR---IVTENGGVPLRSRPQPRQDYHAV 86

Query: 66  DMER-TARFHNIFYKAPSQFPIGTQVAARATLWVQQTQPAKAVDLIKTLYSAYFTEDIDI 124
           +++R   R        P  +P   + +AR  +     Q   A++L   L  A + E+ D+
Sbjct: 87  ELDRWRKRLGMPLVLKPRYYPTNNEFSARMVI-AADRQGLPALELSHALLRALWAEEQDV 145

Query: 125 SVPENVLRIAADNGIDRAALETALGTPELKEQLRAATEAAGKAGVFGSPFMIVDGEQFWG 184
           + P+  + +A   G+D  AL     TPE+      +   A   GVFG+P  +     +WG
Sbjct: 146 TDPDVRIAVANSLGLDGRALRALEDTPEIMAAWHDSHAEAQSRGVFGTPTWVYRDTLYWG 205

Query: 185 FDRFTQLEAFL 195
            DR T L+  L
Sbjct: 206 QDRLTFLDDAL 216