BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0035.p         (325 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21000 [GEPR] COG0477 Permeases of the major facilitator super...    70   7e-12

>SMb21000 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 377

 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 134/292 (45%), Gaps = 24/292 (8%)

Query: 8   ATALLSFLPALTTDTLLQLLLRIVTGVTSA--LIFVSGGLLVSRLAALHAQRAGLLLGLY 65
           AT LL     LT+  L   ++R + G+ SA  +IF+SG +L   LAA    R+  +  ++
Sbjct: 67  ATTLLLAAMGLTSSVLAYSIIRFLAGLASAFAMIFISGIVLGQGLAA----RSEHVPSVH 122

Query: 66  YGGTGIGIVAASLLV--PPVMEAAAARGAPHPWQWAWILLGVLALLASLVMTLPARLMPT 123
           +GG G GI  +S+ V   P+   A    +   W      +G L  LA  V+   A L+P 
Sbjct: 123 FGGVGFGIALSSIAVWVAPLAGVAGLSMSQADW-----FVGALVALAGTVLV--AALLPA 175

Query: 124 SPAQAAGGGAW----RPRSLLFGLTGYLFFGLGYIGYMTFVIALLKEEGMAPARITLFFA 179
           S   A GG       R R L+     Y FFG GY+   TF++A+ ++     +   L + 
Sbjct: 176 SRHAANGGRPEVPLVRSRPLMAMTLTYGFFGFGYVITATFLVAMARDASGGHSVEFLAWL 235

Query: 180 LLGAATFASSRIWARMLDRFQGGQSLAILNGLLCLAT--LLPAMTAAPVAVFASGLLFGG 237
           + G +   S  +W   + RF      AI  GLL  A   +L     +P A    GL+ G 
Sbjct: 236 ITGVSAALSVYLWRFAVPRFGLAGVYAI--GLLVEAVGLVLTVSLPSPYAPLVGGLMLGA 293

Query: 238 CFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQIIGPSIVGWIADGAG 289
            F+   A    + R   P S   A ++  T  F +GQI+GP + GW+A+  G
Sbjct: 294 TFMMVTAYGLQIGRQLAPESPRRA-LAFMTAAFGIGQIVGPLVAGWLAERTG 344